BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg898830
Length=1443
Score E
Sequences producing significant alignments: (Bits) Value
AT3G58740.1 | Symbols: CSY1 | citrate synthase 1 | chr3:2172077... 2122 0.0
AT3G58750.1 | Symbols: CSY2 | citrate synthase 2 | chr3:2172431... 1552 0.0
AT2G42790.1 | Symbols: CSY3 | citrate synthase 3 | chr2:1780147... 1208 0.0
> AT3G58740.1 | Symbols: CSY1 | citrate synthase 1 | chr3:21720773-21723790
REVERSE LENGTH=1800
Length=1800
Score = 2122 bits (1149), Expect = 0.0
Identities = 1349/1447 (93%), Gaps = 8/1447 (1%)
Strand=Plus/Plus
Query 1 ATGGAGATTCCGGAGAGAGCTAGCGCTCGATTAGCCGTTCTCACTGCGCACTTGGCGGCA 60
||||||||| ||||||||||||| ||||||||||||||||||| |||||||||| | | |
Sbjct 65 ATGGAGATTTCGGAGAGAGCTAGAGCTCGATTAGCCGTTCTCAATGCGCACTTGACAGTA 124
Query 61 TCTGAGCCGACTCAGGTGTTGCCGA-CGATCGAGCCGTGGTGCACATCATCTCACATTAG 119
|||||||||| |||||||||||| | ||||||| || ||||||||||| ||||||| |
Sbjct 125 TCTGAGCCGAATCAGGTGTTGCC-AGCGATCGAACCATGGTGCACATCGGCTCACATAAC 183
Query 120 TGCTACACCGCATGGATCCCTTGAAGGAAACTTGACGATCGTCGACGAACGTACGGGTAA 179
||| ||||||||||||| ||| ||||||| |||| ||||||||| || |||||||| ||
Sbjct 184 CGCTGCACCGCATGGATCGCTTAAAGGAAATTTGAAGATCGTCGATGAGCGTACGGGGAA 243
Query 180 AAAATATCAGGTCCCTGTCTCAGAGCATGGTACCGTTAAAGCCGTTGATCTCAAGAAGAT 239
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct 244 TGAATATCAGGTCCCAGTCTCAGAGCATGGTACCGTTAAAACCGTTGATCTCAAGAAGAT 303
Query 240 AACGACAGGGGAGGATGACAAGGGGCTTAAGTTATACGATCCTGGTTACTTAAACACGGC 299
|||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 304 AACGACAGGGAAGGATGACAAGGGGCTTAACTTATACGATCCTGGTTACTTAAACACGGC 363
Query 300 TCCTGTTCGATCTTCGATTTCTTACATCGATGGAGATGAAGGG-ATCCTCCGTTACCGGG 358
|||||||||||||||||||||||||||||||||||||| |||| ||||| ||||| ||||
Sbjct 364 TCCTGTTCGATCTTCGATTTCTTACATCGATGGAGATG-AGGGAATCCTACGTTATCGGG 422
Query 359 GATACTCAGTCGAGGAGTTGGCTGAGAAAAGTACTTATACAGAGGTTACTTATCTCCTAA 418
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 423 GATACCCAGTTGAGGAGTTGGCTGAGAAAAGTACTTATACAGAGGTTACTTATCTCCTAA 482
Query 419 TTTATGGGAATCTGCCTTCTCAACGACAGCTAGCTGATTGGGAGTTTGCGATTTCTCAGA 478
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 483 TTTATGGGAATCTGCCTTCTCAAAGACAGCTAGCTGATTGGGAGTTTGCGATTTCTCAGA 542
Query 479 ATTCAGCTGTGCCACAAGGAGTATTGGATCTCATACAGTCCATGCCTCATGATGTACATC 538
||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||
Sbjct 543 ATTCAGCTGTGCCACAAGGAGTATTGGATATGATACAGTCCATGCCTAATGATGTACATC 602
Query 539 CAATAGGAGCTCTTGTCACTGCAATGAGTGCACTTTCCATCTTTTATCCTGATGCAAATC 598
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 603 CAGTAGGAGCTCTTGTCACTGCAATGAGTGCACTTTCCATCTTTTATCCTGATGCAAATC 662
Query 599 CTTCTCTTATGGGCCTAGGTGTTTACCAGTCAAAACAAGTTCGTGATAAACAGATTTTTC 658
| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 663 CGTCTCTTATGGGCCTAGGTGTTTACAAGTCAAAACAAGTTCGTGATAAACAGATTGTTC 722
Query 659 GTATTCTTGGACAGGCACCAACAATTGCAGCAGCTGCTTATTTGAGGAAGGCAGGCAAGC 718
|| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 723 GTGTTCTTGGACAGGCCCCAACAATTGCAGCAGCTGCTTATTTGAGGAAGGCAGGCAAGC 782
Query 719 CTCCTGTTCAACCTTTGAGCAACCTTTCTTATTCAGAGAATTTCCTCTATATGGTGGAAT 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 783 CTCCTGTTCAACCTTTGAGCAACCTTTCTTATTCAGAGAATTTCCTCTATATGGTGGAAT 842
Query 779 CAATGGGAAATAAGTCTTACAAGCCTAATCCTCGGCTAGCTCGAGTGTTGGACATTATCT 838
|||||||| ||| ||||||||||||||||||||| | ||||||||| ||||||| |||
Sbjct 843 CAATGGGAGATAGGTCTTACAAGCCTAATCCTCGTTTGGCTCGAGTGCTGGACATCCTCT 902
Query 839 TCATTCTGCATGTTGAACATGAGATGAACTGCTCTACTGCTGCTGCTCGGCATCTTTCCT 898
|||| ||||| | ||||||||| |||||||||||||||||||||||| |||| |||||||
Sbjct 903 TCATACTGCAAGCTGAACATGAAATGAACTGCTCTACTGCTGCTGCTAGGCACCTTTCCT 962
Query 899 CTAGTGGTGTTGATGTGTATACTGCTGTTGCGGGAGGTGTTGGAGCCATTTATGGTCCAC 958
||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct 963 CTAGTGGTGGTGATGTGTATACTGCTGTTTCGGGAGGTGTTGGAGCCATTTATGGTCCCC 1022
Query 959 TTCATGGTGGTGCAATTGAGGCTACGGTTAACATGTTATCAGAGATTGGCACTGTTGAAA 1018
|||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct 1023 TTCATGGTGGTGCAGTTGAGGCTACGATTAACATGTTATCAGAGATTGGGACTGTTGAAA 1082
Query 1019 ATATTCCAGAGTTCATTGAAAGCGTGAAGAATAAGAAGAGGAAGTTGTCGGGTTTTGGTC 1078
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct 1083 ATATTCCAGAGTTCATTGAAAGCGTGAAGAATAAGAAGAGGAGGTTGTCGGGTTTTGGAC 1142
Query 1079 ACCGTGTTTACAAAAAATACGATCCTC-GAGGAAAAGTCGTTAAAAAACTGGCGGATCAA 1137
|||| |||||||||| |||||||| | |||||||||||||||| |||||||||||| ||
Sbjct 1143 ACCGCATTTACAAAAACTACGATCC-CAGAGGAAAAGTCGTTAAGAAACTGGCGGATGAA 1201
Query 1138 GTGTTCTCCATTCTTGGAAAGGATCCTCTGTTTGAGGTAGGAGATGCTCTAGAGAAGGCG 1197
||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct 1202 GTGTTCTCCATTCTTGGAAGGGATCCTCTGGTTGAGGTAGGAGATGCTCTAGAGAAGGCG 1261
Query 1198 GCACTCTCGGATGAATATTTCATTAAAAGAAAGCTTTACCCAAATGCTGATTTCTACTCT 1257
||||| || ||||||||||| |||| |||||||| |||||||||| |||||||||||||
Sbjct 1262 GCACTTTCTGATGAATATTTTGTTAAGAGAAAGCTGTACCCAAATGTTGATTTCTACTCT 1321
Query 1258 GGATTAATCTATAGGGCAATGGGAATCCCATCATCATTCATGGCAGTCGCACGTATTGCT 1317
||||||||| |||||||||||||||||||||||||||||| ||||| ||||||| |||
Sbjct 1322 GGATTAATCAATAGGGCAATGGGAATCCCATCATCATTCACCGCAGTATCACGTATCGCT 1381
Query 1318 GGATACTTGTCACACTGGCGTGAGTCGTTAGATGATCCTGACACAAAGATCATGAGACCC 1377
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1382 GGATACTTGTCACACTGGCGTGAGTCTTTAGATGATCCTGACACAAAGATCATGAGACCC 1441
Query 1378 CAGCAGGTCTATACTGGAATGGGGCTAAGGCGTTACGAG-CTAGTGAGAGAAAGAACCAA 1436
|| ||||||||||||||| |||| |||||| ||||||| | ||||||||||||||||||
Sbjct 1442 CAACAGGTCTATACTGGAGCGGGGATAAGGCATTACGAGAC-AGTGAGAGAAAGAACCAA 1500
Query 1437 GCTGTGA 1443
|||||||
Sbjct 1501 GCTGTGA 1507
> AT3G58750.1 | Symbols: CSY2 | citrate synthase 2 | chr3:21724314-21727690
REVERSE LENGTH=2027
Length=2027
Score = 1552 bits (840), Expect = 0.0
Identities = 1264/1465 (86%), Gaps = 43/1465 (3%)
Strand=Plus/Plus
Query 1 ATGGAGATTCCGGAGAGAGCT-AGCGCTCGATTAGCCGTTCTCACTGCGCACTTGGCGGC 59
||||||||| || |||||| | | ||| |||||||||||||||| ||||| |||||||
Sbjct 233 ATGGAGATTTCGCAGAGAG-TGAAAGCTAGATTAGCCGTTCTCACCGCGCATTTGGCGGT 291
Query 60 ATCTG--A--G-CCGACT----CAGGTGTTGCCGACGATCGAGCCGTGGTGCACATCATC 110
|||| | | | || | |||||||||||| |||||| ||| ||||| ||||| |
Sbjct 292 GTCTGATACCGTCGGATTGGAACAGGTGTTGCCGGCGATCGCGCCATGGTGTACATCGGC 351
Query 111 TCACATTAGTGCTACACCGCATGGATCCCTTGAAGGAAACTTGACGATCGTCGACGAACG 170
|||||||| ||| |||| |||||||| || |||||||||||||||||||||| || ||
Sbjct 352 TCACATTACCGCTGCACCTCATGGATCACTCAAAGGAAACTTGACGATCGTCGATGAGCG 411
Query 171 TACGGGTAAAAAATATCAGGTCCCTGTCTCAGAGCATGGTACCGTTAAAGCCGTTGATCT 230
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 412 TACGGGGAAGAAATATCAGGTCCCTGTCTCAGAGCATGGTACCGTTAAAGCCGTTGATCT 471
Query 231 CAAGAAGATAACGACAGGGGA-GGATGACAAGGGGCTTAAGTTATACGATCCTGGTTACT 289
||||||||||||||| ||||| |||||| |||||||| ||||| ||||||||||||||||
Sbjct 472 CAAGAAGATAACGAC-GGGGAAGGATGATAAGGGGCTGAAGTTGTACGATCCTGGTTACT 530
Query 290 TAAACACGGCTCCTGTTCGATCTTCGATTTCTTACATCGATGGAGATGAAGGGATCCTCC 349
| ||||||||||| |||||||||||||||| ||||||||| ||||||||||| ||| | |
Sbjct 531 TGAACACGGCTCCGGTTCGATCTTCGATTTGTTACATCGACGGAGATGAAGGAATCTTAC 590
Query 350 GTTACCGGGGATACTCAGTCGAGGAGTTGGCTGAGAAAAGTACTTATACAGAGGTTACTT 409
|||| ||||||||| || | || ||||||||||||| ||||||| || |||||| |||
Sbjct 591 GTTATCGGGGATACCCAATTGAAGAGTTGGCTGAGAGCAGTACTTTTATTGAGGTTGCTT 650
Query 410 ATCTCCTAATTTATGGGAATCTGCCTTCTCAACGACAGCTAGCTGATTGGGAGTTTGC-G 468
||||||| || ||||| ||||||||||||||| | |||||||||||||||||||| | |
Sbjct 651 ATCTCCTCATGTATGGAAATCTGCCTTCTCAAAGTCAGCTAGCTGATTGGGAGTTCACTG 710
Query 469 ATTTCTCAGAATTCAGCTGTGCCACAAGGAGTATTGGATCTCATACAGTCCATGCCTCAT 528
|||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 711 -TTTCTCAGCATTCAGCTGTGCCACAAGGAGTATTGGATATCATACAGTCCATGCCTCAT 769
Query 529 GATGTACATCCAATAGGAGCTCTTGTCACTGCAATGAGTGCACTTTCCATCTTTTATCCT 588
|||| ||| ||||| |||| |||||| | ||| |||||||||||||| |||||| | |||
Sbjct 770 GATGCACACCCAATGGGAGTTCTTGTGAGTGCCATGAGTGCACTTTCTATCTTTCACCCT 829
Query 589 GATGCAAATCCTTCTCTTA-TGGGCCTAGGTGTTTACCAGTCAAAACAAGTTCGTGATAA 647
|||||||||||| |||||| ||| || || ||||| ||||||||||||||||||||||
Sbjct 830 GATGCAAATCCTGCTCTTAGTGG-CCAAGACATTTACAAGTCAAAACAAGTTCGTGATAA 888
Query 648 ACAGATTTTTCGTATTCTTGGACAGGCACCAACAATTGCAGCAGCTGCTTATTTGAGGAA 707
||||||| |||| ||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct 889 ACAGATTGTTCGCATTCTCGGAAAGGCACCAACAATTGCAGCAGCTGCTTATTTGAGGAC 948
Query 708 GGCAGGCAAGCCTCCTGTTCAACCTTTGAGC-AACCTTTCTTATTCAGAGAATTTCCTCT 766
|||||||| ||||||||||| |||| | || ||||||||||||||||||||||||||||
Sbjct 949 GGCAGGCAGGCCTCCTGTTCTTCCTTCG-GCCAACCTTTCTTATTCAGAGAATTTCCTCT 1007
Query 767 ATATGGTGGAATCAATGGGAAATAAGTCTTACAAGCCTAATCCTCGGCTAGCTCGAGTGT 826
||||| |||| |||||||| |||| ||||||||||||||||||||| | |||||||||
Sbjct 1008 ATATGCTGGATTCAATGGGCAATAGGTCTTACAAGCCTAATCCTCGTTTGGCTCGAGTGC 1067
Query 827 TGGACATTATCTTCATTCTGCATGTTGAACATGAGATGAACTGCTCTACTGCTGCTGCTC 886
||||||| ||||||| ||||||| ||||||||| |||||||||||||||||||||||||
Sbjct 1068 TGGACATCCTCTTCATACTGCATGCTGAACATGAAATGAACTGCTCTACTGCTGCTGCTC 1127
Query 887 GGCATCTTTCCTCTAGTGGTGTTGATGTGTATACTGC-TGTTGCGGGAGGTGTTGGAGC- 944
|||||||| |||||||||||||||||||||| || || ||| || |||| |||||| ||
Sbjct 1128 GGCATCTTGCCTCTAGTGGTGTTGATGTGTACACCGCATGT-GCTGGAGCTGTTGGGGCG 1186
Query 945 CATTTATGGTCCACTTCATGGTGGTGC-AATTGAGGCTACG-G-TTAACATGTTATCAGA 1001
| |||||||||||||||||||||| || || ||||| || | |||| |||||| ||||
Sbjct 1187 C-TTTATGGTCCACTTCATGGTGGCGCGAAC-GAGGC--CGTGCTTAAGATGTTAGCAGA 1242
Query 1002 GATTGGCACTGTTGAAAATATTCCAGAGTTCATTGAAAGCGTGAAGAATAAGAA-GAGGA 1060
|||||| |||| ||||||||||||||| ||||||||| |||||||||| | ||| |||||
Sbjct 1243 GATTGGGACTGCTGAAAATATTCCAGATTTCATTGAAGGCGTGAAGAACA-GAAAGAGGA 1301
Query 1061 AGTTGTCGGGTTTTGGTCACCGTGTTTACAAAAAATACGATCCTCGAGGAAAAGTCGTTA 1120
|| |||| |||||||| || |||||||||||||| || || || |||| |||||| | |
Sbjct 1302 AGATGTCAGGTTTTGGACATCGTGTTTACAAAAACTATGACCCCCGAGCAAAAGTTATAA 1361
Query 1121 AAAAACTGGCGGATCAAGTGTTCTCCATTCTTGGAAAGGATCCTCTGTTTGAGGTAGGAG 1180
|||||||||| ||| |||||||||||||| |||| | ||||||||| | ||||||| ||
Sbjct 1362 AAAAACTGGCAGATGAAGTGTTCTCCATTGTTGGTAGGGATCCTCTCATCGAGGTAGCAG 1421
Query 1181 ATGCTCTAGAGAAGGCGGCACTCTCGGATGAATATTTCATTAAAAGAAAGCTTTACCCAA 1240
||||||||||||||||||||| || ||||||||||| |||| |||||||| |||||||
Sbjct 1422 TTGCTCTAGAGAAGGCGGCACTGTCTGATGAATATTTTGTTAAGAGAAAGCTGTACCCAA 1481
Query 1241 ATGCTGATTTCTACTCTGGATTAATCTATAGGGCAATGGGAATCCCATCATCATTC---A 1297
||| ||||||||||||||||||||||||||||||||||||| ||||| || |||| |
Sbjct 1482 ATGTTGATTTCTACTCTGGATTAATCTATAGGGCAATGGGATTCCCACCAGAATTCTTCA 1541
Query 1298 ---T---G---GCAGTCGCACGTATTGCTGGATACTTGTCACACTGGCGTGAGTCGTTAG 1348
| | |||||| | ||||| ||||||||||||||||||||||||||||||||||
Sbjct 1542 CAGTCCTGTTCGCAGTCCCGCGTATGGCTGGATACTTGTCACACTGGCGTGAGTCGTTAG 1601
Query 1349 ATGATCCTGACACAAAGATCATGAGACCCCAGCAGGTCTATACTGGAATGGGGCTAAGGC 1408
||||||||||||| | ||||||||||||||| |||| |||||||||| || || | ||||
Sbjct 1602 ATGATCCTGACACTAGGATCATGAGACCCCAACAGGCCTATACTGGAGTGTGGATGAGGC 1661
Query 1409 GTTACGAGCTAGTGAGAGAAAGAAC 1433
|||||||| |||||||||| ||||
Sbjct 1662 ATTACGAGCCAGTGAGAGAACGAAC 1686
> AT2G42790.1 | Symbols: CSY3 | citrate synthase 3 | chr2:17801471-17806049
REVERSE LENGTH=3249
Length=3249
Score = 1208 bits (654), Expect = 0.0
Identities = 1115/1335 (84%), Gaps = 42/1335 (3%)
Strand=Plus/Plus
Query 125 CACCGCATGGATCCCTTGAA-GGAA-ACTTGACGATCGTCGACGAACGTACGGGTAAAAA 182
|||||| ||||| | ||||| |||| || ||||||||||||||||||| || || |||||
Sbjct 177 CACCGCTTGGAT-CTTTGAAGGGAACAC-TGACGATCGTCGACGAACGCACCGG-AAAAA 233
Query 183 A-TATCAGGTCCCTGTCTCAGA-GCATGGTACCGTTAAAGCCGTTGATCTCAAGAAGATA 240
| ||| | || || |||||||| | ||||||||||||||||||||||| |||| ||||||
Sbjct 234 ATTATAAAGTTCCGGTCTCAGATG-ATGGTACCGTTAAAGCCGTTGATTTCAAAAAGATA 292
Query 241 ACGACAGGGG-AGGATGACAAGGGGCTTAAGTTATACGATCCTGGTTACTTAAACACGGC 299
||| |||| |||| |||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 293 GTGAC-GGGGAAGGAAGACAAGGGGCTTAAGTTATACGATCCAGGTTACTTGAACACGGC 351
Query 300 TCCTGTTCGATCTTCGATTTCTTACATCGATGGAGATGAAGGGATCCTCCGTTACCGGGG 359
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 352 TCCTGTTCGATCTTCGATTTCTTACATCGATGGAGATGAAGGGATCCTTCGTTACCGTGG 411
Query 360 ATACTCAGTCGAGGAGTTGGCTGAGAAAAGTACTTATACAG-AGGTTACTTATCTCCTAA 418
||| || | ||||| |||||||||| ||||||| | | | |||| ||||||| || |
Sbjct 412 CTACCCAATTGAGGAAATGGCTGAGAACAGTACTTTT-CTGGAGGTGGCTTATCTTCTCA 470
Query 419 TTTATGGGAATCTGCCTTCTCAACGACAGCTAGCTGATTGGGAGTTTGC-GATTTCTCAG 477
| |||||||||||||| ||| || | |||||| |||||||||||||||| | ||||||||
Sbjct 471 TGTATGGGAATCTGCCCTCTGAAAGTCAGCTATCTGATTGGGAGTTTGCAG-TTTCTCAG 529
Query 478 AATTCAGCTGTGCCACAAGGAGTATTGGATCTCATACAGTCCATGCCTCATGATGTACAT 537
||||||||||||||||||| ||||| ||| | |||||||| ||||||||||||| |||
Sbjct 530 CATTCAGCTGTGCCACAAGGTGTATTAGATATTATACAGTCTATGCCTCATGATGCACAC 589
Query 538 CCAATAGGAGCTCTTGTCACTGCAATGAGTGCACTTTCCATCTTTTATCCTGATGCAAAT 597
||||| |||| |||||| | |||||||||||| |||||||||||| |||||||||| |||
Sbjct 590 CCAATGGGAGTTCTTGTGAGTGCAATGAGTGCGCTTTCCATCTTTCATCCTGATGCTAAT 649
Query 598 CCTTCTCTTATGGGCCTAGG-TGTTTACCAGTCAAAACAAGTTCGTGATAAACAGATTTT 656
||| |||||| ||||| ||| | ||||| | |||||||||||| | |||||||| ||| |
Sbjct 650 CCTGCTCTTAGGGGCC-AGGATATTTACGATTCAAAACAAGTTAGAGATAAACAAATTAT 708
Query 657 TCGTATTCTTGGACAGGCACCAACAATTGCAGCAGCTGCTTATTTGAGGAAGGCAGGCAA 716
|| ||| ||||| ||||||||||||||||||||||||||||| |||||| |||||| ||
Sbjct 709 CCGCATTATTGGAAAGGCACCAACAATTGCAGCAGCTGCTTATCTGAGGATGGCAGG-AA 767
Query 717 G-CCTCCTGTTCAACCTTTGAGCAA-CCTTTCTTATTCAGAGAATTTCCTCTATATGGTG 774
| |||||||||| |||| || || |||| ||||| |||| ||||||||||||||| |
Sbjct 768 GGCCTCCTGTTCTTCCTTC-AGGAAACCTTCCTTATGCAGATAATTTCCTCTATATGCTT 826
Query 775 GAATCAATGGGAAATA-AGTCTTACAAGCCTAATCCTCGGCTAGCTCGAGTGTTGGACAT 833
|| || ||||||||| | || ||||| |||||||||||||| ||||| |||||||||||
Sbjct 827 GATTCCCTGGGAAATAGA-TCCTACAAACCTAATCCTCGGCTGGCTCGGGTGTTGGACAT 885
Query 834 TATCTTCATTCTGCATGTTGAACATGAGATGAACTGCTCTACTGCTGCTGCTCGGCATCT 893
||||||| ||||||| || ||||| ||||||||||| || |||||||||||||||||
Sbjct 886 CCTCTTCATACTGCATGCAGAGCATGAAATGAACTGCTCCACCGCTGCTGCTCGGCATCT 945
Query 894 TTCCTCTAGTGGTGTTGATGTGTATACTGCTGTTGCGGGAGGTGTTGGAGC-CATTTATG 952
| ||||||| ||||||||||| || ||||||||||| |||| ||| ||||| | ||||||
Sbjct 946 TGCCTCTAGCGGTGTTGATGTCTACACTGCTGTTGCTGGAGCTGTGGGAGCGC-TTTATG 1004
Query 953 GTCCACTTCATGGTGGTGCAATTGAGGCTACGGTTAACATGTTATCAGAGATTGGCACTG 1012
||||||||||||||||||||| |||||| | |||| ||||| ||||||||||| ||||
Sbjct 1005 GTCCACTTCATGGTGGTGCAAACGAGGCTGTGCTTAAGATGTTGTCAGAGATTGGGACTG 1064
Query 1013 TTGAAAATATTCCAGAGTTCATTGAAAGCGTGAAGAATAAGAAGAGGAAGTTGTCGGGTT 1072
||||||||||||||||||||||||| | |||||||| | |||||||||| |||| ||||
Sbjct 1065 TTGAAAATATTCCAGAGTTCATTGAGGGTGTGAAGAACAGGAAGAGGAAGATGTCTGGTT 1124
Query 1073 TTGGTCACCGTGTTTACAAAAAATACGATCCTCGAGGAAAAGTCGTTAAAAAACTGGCGG 1132
|||| |||||||| |||||||| || || ||||||| |||||| | || || ||||| |
Sbjct 1125 TTGGACACCGTGTGTACAAAAACTATGACCCTCGAGCTAAAGTCATCAAGAACCTGGCTG 1184
Query 1133 ATCAAGTGTTCTCCATTCTTGGAAAGGATCCTCTGTTTGAGGTAGGAGATGCTCTAGAGA 1192
|| |||| || |||||| |||||||||||||||| ||||||| | | ||| || ||||
Sbjct 1185 ATGAAGTATTTTCCATTGTTGGAAAGGATCCTCTAATTGAGGTTGCTGTTGCACTTGAGA 1244
Query 1193 AGGCGGCACTCTCGGATGAATA-TTTCATTAAAAGAAAGCTTTACCCAAATGCTGATTTC 1251
|||| || ||||| || || || ||| |||| |||||||| || ||||||| ||| |||
Sbjct 1245 AGGCAGCTCTCTCTGACGATTACTTTG-TTAAGAGAAAGCTGTATCCAAATGTTGACTTC 1303
Query 1252 TACTCTGGATTAATCTATAGGGCAATGGGAATCCCATC--A-T-CATTCATGG-C--AGT 1304
|||||||||||||| || |||||||||||| | ||| | | | | |||| || | | |
Sbjct 1304 TACTCTGGATTAATATACAGGGCAATGGGATTTCCACCGGAGTTC-TTCACGGTCTTATT 1362
Query 1305 CGC-A--CGT---ATTGCTGGATACTTGTCACACTGGCGTGAGTCGTTAGATGATCCTGA 1358
||| | | | || ||||||||||||||||| ||| ||||| | |||||||||||
Sbjct 1363 CGCGATTCCTCGCATGGCTGGATACTTGTCACATTGGAAAGAGTCACTGGATGATCCTGA 1422
Query 1359 CACAAAGATCATGAGACCCCAGCAGGTCTATACTGGAATGGGGCTAAGGCGTTACG-AGC 1417
||| |||||||||||||| || ||||| || || || || |||| |||| |||| | |
Sbjct 1423 CACCAAGATCATGAGACCACAACAGGTGTACACAGGCGTGTGGCTGAGGCATTACACACC 1482
Query 1418 TAGTGAGAGAAAGAA 1432
||||||||| ||||
Sbjct 1483 -AGTGAGAGAGAGAA 1496
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 71134172265
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5