BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg898848 Length=372 Score E Sequences producing significant alignments: (Bits) Value AT5G07950.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 183 7e-46 > AT5G07950.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:2540284-2542136 REVERSE LENGTH=1247 Length=1247 Score = 183 bits (99), Expect = 7e-46 Identities = 119/129 (92%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 72 GTATATGCCAATGATGGAGCTTGGTGTGTCGAGTAACATGTTTGATATCAAGAAGAACGC 131 ||||||||||||||||||||||||||||| |||| |||||||||||||| | ||||| || Sbjct 335 GTATATGCCAATGATGGAGCTTGGTGTGTTGAGTGACATGTTTGATATCGACAAGAAAGC 394 Query 132 TTTGAAGAAGCTGTCTAAGCAACAGAGTGCTTATCGAATCAAGCTTTTATCGTCGTACAA 191 |||||||||||||| || |||||||||| | |||||||||||||||||||| |||||||| Sbjct 395 TTTGAAGAAGCTGTTTACGCAACAGAGTTCCTATCGAATCAAGCTTTTATCTTCGTACAA 454 Query 192 GGAAATGGT 200 ||||||||| Sbjct 455 GGAAATGGT 463 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 17493176652 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5