BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg898892
Length=1041
Score E
Sequences producing significant alignments: (Bits) Value
AT3G59340.1 | Symbols: | Eukaryotic protein of unknown functio... 1581 0.0
AT3G59320.1 | Symbols: | Eukaryotic protein of unknown functio... 826 0.0
AT3G59310.2 | Symbols: | Eukaryotic protein of unknown functio... 730 0.0
AT3G59330.1 | Symbols: | Eukaryotic protein of unknown functio... 403 2e-111
> AT3G59340.1 | Symbols: | Eukaryotic protein of unknown function
(DUF914) | chr3:21928764-21931570 REVERSE LENGTH=1325
Length=1325
Score = 1581 bits (856), Expect = 0.0
Identities = 983/1044 (94%), Gaps = 10/1044 (1%)
Strand=Plus/Plus
Query 1 ATGGCAATGGGTTTTGATTTCAATGAGATGAATAAAACGAAGAAAACTTTGATTGGACTT 60
|||||||||||||| ||||||||||||||||| ||||| ||||| ||||| |||||||||
Sbjct 117 ATGGCAATGGGTTTCGATTTCAATGAGATGAACAAAACAAAGAAGACTTTAATTGGACTT 176
Query 61 GGCTTAGGACAAATCCTCTCACTTCTATGTACTTCTATTGCCTTCACATCCTCTGAGCTC 120
||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 177 GGCTTGGGACAGATCCTCTCACTTCTATGTACTTCTAATGCCTTCACATCCTCTGAGCTC 236
Query 121 GCCAGAAAAGGAATAAATGCTCCAACATCACAAACCTTCCTCAGTTATACATTACTGGCA 180
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 237 GCCAGAAAAGGAATAAATGCTCCAACGTCACAAACGTTCCTCAGTTATACATTACTGGCA 296
Query 181 GTCGTCTATGGAGGTATCGTGATGTATCGAAGACCAACAATTAAGGGGAAGTGGTATCAC 240
|||||||||||||||||| || | ||||| ||||||||||||||||||||||||||||||
Sbjct 297 GTCGTCTATGGAGGTATCATGCTCTATCGGAGACCAACAATTAAGGGGAAGTGGTATCAC 356
Query 241 TACTTCCTCCTTGCCTTAGTTGACGTGGAAGGCAATTTTCTTGTGGTGAAGGCGAATCAG 300
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 357 TATTTCCTCCTTGCTTTAGTTGACGTGGAAGGCAATTTTCTTGTGGTGAAGGCGAATCAG 416
Query 301 TACACATCGATAACGAGTATCATGCTACTGGATTGCTGGGCGATCCCTTGCGTTTTGGTC 360
||||||||||| ||||||||||||||||| |||||||||||||||||||| || ||||||
Sbjct 417 TACACATCGATTACGAGTATCATGCTACTTGATTGCTGGGCGATCCCTTGTGTGTTGGTC 476
Query 361 TTGACTTGGATTTTCCTGAAAACAAAATACAGATTGATGAAGATCAGTGGTGTGTTTATC 420
|| |||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 477 TTAACTTGGATGTTCCTGAAAACAAAATACAGATTAATGAAGATCAGTGGTGTATTTATC 536
Query 421 TGTATTGCTGGTGTTGTCATGGTAGTCTTCTCAGACGTTCACGCAGGAAGTAGAGCAGGA 480
|||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||
Sbjct 537 TGTATTGCTGGTGTTGTCATGGTACTCTTCTCTGACGTTCACGCAGGAAGTCGAGCAGGT 596
Query 481 GGAAGTAATCCTGTTAAAGGAGATTTTCTAGTTTTAGCTGGAGCAACTTTATATGCTGTC 540
||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct 597 GGAAGTAATCCTGTTAAAGGAGATTTTCTTGTTCTAGCTGGAGCAACTTTATATGCTGTC 656
Query 541 AGTAATACCACCGAGGAGTTCCTTGTGAAGAATGCAGGCACAGTTGAGTTGATGACCTTC 600
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct 657 AGTAATACCACCGAGGAGTTTCTTGTGAAGAATGCAGACACAGTTGAGTTGATGACCTTC 716
Query 601 ATGGGACTTTTTGGAGCCATTATTAGTGCCATTCAGGTAGCCATATTTGAACAAGGTGAG 660
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 717 ATGGGACTTTTTGGAGCCATTATTAGTGCCATTCAGGTAGCCATATTCGAACAAGGTGAG 776
Query 661 CTCAAAGCTATTCTCTGGTCAGCTGATGCCGTTTTCCCTTTCCTTAGATTCGCAATCACG 720
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 777 CTCAAAGCTATTCACTGGTCAGCTGATGCAGTTTTCCCTTTCCTTAGATTCGCAATCACG 836
Query 721 ATGTTTCTCTTCTACTCACTACTACCGGTTTTACTGAGGACCAATGGTTCAACAATGTTC 780
||||| |||||||| |||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct 837 ATGTTCCTCTTCTATTCACTACTACCGATTTTACTGAGGACTAATGGTTCAACAATGTTC 896
Query 781 AACCTCTCGTTGCTCACATCAGACATGTGGGCTGTTTTGACCCGCATTTTCGCATACCAC 840
| |||||| ||||| ||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct 897 ACCCTCTCATTGCTGACATCAGACATGTGGGCGGTTTTGATCCGCATTTTCGCATACCAC 956
Query 841 GAGAAGGTGGATTGGCTCTATTACTTGGCATTTGCTACAACAGCTATTGGACTGATCATA 900
|||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 957 GAGAAGGTTGATTGGCTCTACTACTTGGCATTTGCTACAACAGCTATTGGACTAATCATA 1016
Query 901 TACTCAATgaaggagaaagatgaggaagaagaaagagaggagcagaggaagaagctgttg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1017 TACTCAATGAAGGAGAAAGATGAGGAAGAAGAAAGAGAGGAGCAGAGGAAGAAACTGTTG 1076
Query 961 gatgagattgaggaggCAGGTGAAACACTTCCAGACAGC--C-TTATAGTTGCTTCCACC 1017
|||||| ||||| |||| || |||||||||||| | | |||||||||||||||||
Sbjct 1077 GATGAG---GAGGA---AGGTCAATCACTTCCAGACA-CATCGTTATAGTTGCTTCCACC 1129
Query 1018 GGAACCCTAACCAAAGGGCTATGA 1041
|||||||||||||||||| |||||
Sbjct 1130 GGAACCCTAACCAAAGGGATATGA 1153
> AT3G59320.1 | Symbols: | Eukaryotic protein of unknown function
(DUF914) | chr3:21924523-21926840 REVERSE LENGTH=1202
Length=1202
Score = 826 bits (447), Expect = 0.0
Identities = 854/1044 (82%), Gaps = 53/1044 (5%)
Strand=Plus/Plus
Query 17 ATTTCAATGAGATGAATAAAACGAAGAAAACTTTGATTGGACTTGGCTTAGGACAAATCC 76
|||||||||||||| || |||||||| ||| | ||||||||||| |||||||| |||
Sbjct 14 ATTTCAATGAGATG---AAGACGAAGAAGACTCTCATTGGACTTGGATTAGGACAGATCA 70
Query 77 TCTCACTTCTATGTACTTCT-ATTGCCTTCACA-T-CCTCTGAGCTCGCCAGAAAAGGAA 133
|||| ||||| | ||||| | |||||| || | | |||||||| ||||||||||||| |
Sbjct 71 TCTCGCTTCTCTCTACTT-TAATTGCC-TC-TATTGCCTCTGAGATCGCCAGAAAAGGGA 127
Query 134 TAAATGCTCCAACATCACAAACCTTCCTCAGTTATACATTACTGGCAGTCGTCTATGGAG 193
| | |||||||||||| || || || || ||||| | ||| ||| ||||||||||||
Sbjct 128 TTAGTGCTCCAACATCTCAGACGTTTCTGGGTTATGTGTCACTTGCAATCGTCTATGGAG 187
Query 194 GTATCGTGATGTATCGAAGA-CCAACAATTAAGGGGAAGTGGTATCACTACTTCCTCCTT 252
||||| || ||||||||||| || ||||||| | ||||||||||||||| || ||||||
Sbjct 188 GTATCATGCTGTATCGAAGATCC-GCAATTAAAGTGAAGTGGTATCACTATTTTCTCCTT 246
Query 253 GCCT-TAGTTGACGTGGAAGGC-AATTTTCTTGTGGTGAAGGCGA-ATCAGTACACATCG 309
| || | ||||| |||| |||| || ||||| || || ||||| | |||| ||||||||
Sbjct 247 G-CTGTTGTTGATGTGG-AGGCGAACTTTCTCGTTGTCAAGGC-ATTTCAGAACACATCG 303
Query 310 ATAACGAGTATCATGCTACTGGATTGCTGGGCGATCCCTTGCGTTTTGGTCTTGACTTGG 369
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 304 ATGACTAGTATCATGCTACTGGATTGCTGGGCGATCCCTTGCGTTTTGGTCTTGACTTGG 363
Query 370 ATTTTCCTGAAAACAAAATACAGATTGATGAAGATCAGTGGTGT-GTTTATCTGTATTGC 428
||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||
Sbjct 364 GTTTTCCTGAAAACAAGATACAGATTGATGAAGATCAGTGGTGTTGTT-ATCTGTATTGT 422
Query 429 TGGTGTTGTCATGGTAGTCTTCTCAGACGTTCACGCAGGA-AGTAGAGCAGGAGGAAGTA 487
|||||| ||||||||||| ||||||||||| || ||||| | | |||| || |||||||
Sbjct 423 TGGTGTCGTCATGGTAGTTTTCTCAGACGTCCATGCAGGGGA-TCGAGCTGGTGGAAGTA 481
Query 488 ATCCTGTTAAAGGAGATTTTCTAGTTTTAGCTGGAGCAACTTTATATGCTGTCAGTAATA 547
||||||| |||||||||||||| ||| |||||||||| || || |||||||||||||||
Sbjct 482 ATCCTGTCAAAGGAGATTTTCTTGTTATAGCTGGAGCTACCTTGTATGCTGTCAGTAATG 541
Query 548 CCACCGAGGAGTTCCTTGTGAAGAATGCAGGCAC-AGTTGAGTTGATGACCTTCATGGGA 606
||| ||||||||||| ||||||||||||| | | | ||| | ||| | || ||||
Sbjct 542 TCACTGAGGAGTTCCTAGTGAAGAATGCAGACGTGACT-GAGCTCATGGCTTTTTTGGGC 600
Query 607 CTTTTTGGAGCCATTATTAG-TGCCATTCAGGTA-GCCATATTTGAACAAGGTG-AGCTC 663
||||| || || |||||| | |||||||||| || || |||||||||| |||| || ||
Sbjct 601 CTTTTCGGCGCAATTATT-GCTGCCATTCAGATAAGC-ATATTTGAACGTGGTGCAG-TC 657
Query 664 AAAGCTATTCTCTGGTCAGCTGATGCCG-TTTTCCCTTTCC-TTAGATTCGCAATCACGA 721
| |||||||| |||||| |||| || | |||| | ||| | || || |||| || |
Sbjct 658 AGAGCTATTCAGTGGTCAACTGAGGC-GATTTTAC-TTTACATTGGAGGCGCACTCGGGT 715
Query 722 TGTTTCTCTTCTACTCACTACT-ACCGGTTTTACTGAGGACCAATGGTTCAACAATGTTC 780
| ||||| || ||| || || | || | ||| | | || ||||||||||||||||||
Sbjct 716 TATTTCTGTTTTACACATTAATCACAA-TCTTAATCAAGAATAATGGTTCAACAATGTTC 774
Query 781 AACCTCTCGTTGCTCACATCAGACATGTGGGCTGTTTTGACCCGCA-TTTTCGCATACCA 839
||||||||||||||||||||||||||||||||| |||||| ||||| |||| | |||||
Sbjct 775 AACCTCTCGTTGCTCACATCAGACATGTGGGCTATTTTGATCCGCACTTTTGGT-TACCA 833
Query 840 CGAGAAGGTGGATTGGCTCTA-TTACTTGGCATTTGCTACAACAGCTATTGGACTGATCA 898
||| ||||| ||||||||||| || ||||||||||||||| ||||||| |||||||||||
Sbjct 834 CGAAAAGGTTGATTGGCTCTACTT-CTTGGCATTTGCTACTACAGCTACTGGACTGATCA 892
Query 899 TATACTCAATgaaggagaaagatgaggaagaagaaaga-gaggagcagagg-aaga-agc 955
|||||||||||||||||||||||||||| ||| ||||| | |||| || || ||| ||
Sbjct 893 TATACTCAATGAAGGAGAAAGATGAGGAGGAACAAAGAAGTGGAGAAGTGGTAAGTGAGA 952
Query 956 tgttgga---tga--gattgaggaggCA-GGTGAAACACTTC-CAGACAGCCTTATAGTT 1008
| ||| || ||| ||||||| | ||||| | || | ||| || |||||||| |
Sbjct 953 GGA-GGAAGCTGTTCGAT-GAGGAGG-ATGGTGACTCGCTCCACAG-CAACCTTATAGAT 1008
Query 1009 GCTTCCACCGGAACCCTAACCAAA 1032
||||||||| ||| ||||| ||||
Sbjct 1009 GCTTCCACCTGAAACCTAATCAAA 1032
> AT3G59310.2 | Symbols: | Eukaryotic protein of unknown function
(DUF914) | chr3:21921746-21924412 REVERSE LENGTH=1761
Length=1761
Score = 730 bits (395), Expect = 0.0
Identities = 592/686 (86%), Gaps = 17/686 (2%)
Strand=Plus/Plus
Query 7 ATGGGTTTTGATTTCAATGAGATGAATAAAACGAAGAAAACTTTGATTGGACTTGGCTTA 66
|||||||| ||||| || | || || || |||||||| || ||||||| ||||| ||
Sbjct 100 ATGGGTTTCGATTT-AAAG-GA-GATTAGGACGAAGAAGACACTGATTGGTCTTGGTTTG 156
Query 67 GGACAAATCCTCTCACTTCTATG-TACTTCTATTGCCTTCACATCCTCTGAGCTCGCCAG 125
||||| ||||||||||||| || |||||||| || ||| ||||| ||||||||||||||
Sbjct 157 GGACAGCTCCTCTCACTTCT-TGCTACTTCTAATGGCTTTACATCTTCTGAGCTCGCCAG 215
Query 126 AAAAGGAATAAATGCTCCAACATCACAAACCTTCCTCAGTTATACATTACTGGCAGTCGT 185
||||||||| |||| ||||||||||||| ||| || | |||| ||||||||| ||||
Sbjct 216 AAAAGGAATTAATGTTCCAACATCACAATGCTTTCTGAATTATGTGTTACTGGCAATCGT 275
Query 186 CTATGGAGGTATCGTGATGTATCGAAGA-CCAACAATTAAGGGGAAGTGGTATCACTACT 244
||||||| ||||| || ||||||||||| || || ||||||| ||| |||||| |||| |
Sbjct 276 CTATGGAAGTATCATGCTGTATCGAAGATCCGAC-ATTAAGGCGAAATGGTATTACTATT 334
Query 245 TCCTCCTTGCCTTAGTTGACGTGGAAGG-CAATTTTCTTGTGGTGAAGGCGAATCAGTAC 303
|||||||||| || ||||| |||| ||| ||||||||| ||||||||||| | || |||
Sbjct 335 TCCTCCTTGCTTTTGTTGATGTGG-AGGCCAATTTTCTCGTGGTGAAGGCTTACCAATAC 393
Query 304 ACATCGA-TAACGAGTATCATGCTACTGGATTGCTGGGCGATCCCTTGCGTTTTGGTCTT 362
|| || | | || ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 394 ACTTC-ATTGACAAGTGTCATGCTACTGGATTGCTGGGCGATCCCTTGCGTTTTGGTCTT 452
Query 363 GACTTGGATTTT-CCTGAAAACAAAATACAGATTGATGAAGATCAGTGGTGTGTTTATCT 421
||||||| |||| ||| || |||||||||||||||||||||||||||||||| |||||||
Sbjct 453 GACTTGG-TTTTACCTTAAGACAAAATACAGATTGATGAAGATCAGTGGTGTTTTTATCT 511
Query 422 GTATTGCTGGTGTTGTCATGGTAGTCTTCTCAGACGTTCACGCAGGA-AGTAGAGCAGGA 480
|||||| ||||||| | |||||||||||||||||||| || ||||| | | |||| |||
Sbjct 512 GTATTGTTGGTGTTTTTATGGTAGTCTTCTCAGACGTCCATGCAGGGGA-TCGAGCTGGA 570
Query 481 GGAAGTAATCCTGTTAAAGGAGATTTTCTAGTTTTAGCTGGAGCAACTTTATATGCTGTC 540
||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 571 GGAAGTAATCCTGTTAAAGGAGATTTTCTTGTTTTAGCTGGAGCAACCTTATATGCTGTT 630
Query 541 AGTAATACCACCGAGGAGTTCCTTGTGAAGAATGCAGGCACAGTTGAGTTGATGACCTTC 600
|||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct 631 AGTAATACCAGCGAGGAGTTCCTTGTGAAGAATGCAGATACAGTTGAGCTGATGACCTTC 690
Query 601 ATGGGACTTTTTGGAGCCATTATTAGTGCCATTCAGGTA-GCCATATTTGAACAAGGTGA 659
|||| |||||||||||||||||||||||||||||||| | ||| |||||| | |||
Sbjct 691 TTGGGGTTTTTTGGAGCCATTATTAGTGCCATTCAGGTAAGT-ATACTTGAACGTGATGA 749
Query 660 GCTCAAAGCTATTCTCTGGTCAGCTG 685
||| |||||||||| ||||||| |||
Sbjct 750 GCTTAAAGCTATTCACTGGTCAACTG 775
Score = 289 bits (156), Expect = 4e-77
Identities = 208/233 (89%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 691 GTTTTCCCTTTCCTTAGATTCGCAATCACGATGTTTCTCTTCTACTCACTACTACCGGTT 750
||||| || |||||||||||| || |||| ||||||||||||||| || || | |||||
Sbjct 874 GTTTTTCCGTTCCTTAGATTCACACTCACAATGTTTCTCTTCTACCCATTAGTCCCGGTC 933
Query 751 TTACTGAGGACCAATGGTTCAACAATGTTCAACCTCTCGTTGCTCACATCAGACATGTGG 810
||||| | |||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct 934 TTACTCAAGACCAATGGTGCAACAATGTTCAACCTCTCGTTGCTCACATCAGATATGTGG 993
Query 811 GCTGTTTTGACCCGCA-TTTTCGCATACCACGAGAAGGTGGATTGGCTCTA-TTACTTGG 868
|||||||||| ||||| |||| | |||||||||||||| ||||||||||| || |||||
Sbjct 994 GCTGTTTTGATCCGCACTTTTGGT-TACCACGAGAAGGTTGATTGGCTCTACTT-CTTGG 1051
Query 869 CATTTGCTACAACAGCTATTGGACTGATCATATACTCAATgaaggagaaagat 921
|||||||||| ||||||| |||||||||||||||||| |||||||||||||||
Sbjct 1052 CATTTGCTACTACAGCTACTGGACTGATCATATACTCCATGAAGGAGAAAGAT 1104
> AT3G59330.1 | Symbols: | Eukaryotic protein of unknown function
(DUF914) | chr3:21926961-21928499 REVERSE LENGTH=937
Length=937
Score = 403 bits (218), Expect = 2e-111
Identities = 359/426 (84%), Gaps = 14/426 (3%)
Strand=Plus/Plus
Query 229 AAGTGGTATCACTACT-TCCTCCTTGCCTTAGTTGACGTGGAAGGC-AATTTTCTTGTGG 286
|||||||||||||| | |||||||||| || ||||| || | |||| || ||||| ||||
Sbjct 435 AAGTGGTATCACTA-TCTCCTCCTTGCGTTTGTTGATGTTG-AGGCGAACTTTCTCGTGG 492
Query 287 TGAAGGCGAATCAGTACACATCGATAACGAGTATCATGCTACTGGATTGCTGGGCGATCC 346
| ||||| ||||| ||||||| || |||||| ||||||||||||| |||||||| ||||
Sbjct 493 TAAAGGCTTATCAGAACACATCAATGACGAGTGTCATGCTACTGGACTGCTGGGCCATCC 552
Query 347 CTTGCGTTTTGGTCTTGACTTGGATTTTCCTGAAA-ACAAAATACAGATTGATGAAGATC 405
|||| |||||||| || |||||| ||||||| ||| ||||||||||||||||||||||||
Sbjct 553 CTTGTGTTTTGGTTTTTACTTGGGTTTTCCT-AAAGACAAAATACAGATTGATGAAGATC 611
Query 406 AGTGGTGTGTTTATCTGTATTGCTGGTGTTGTCATGGTAGTCTTCTCAGACGTTCACGCA 465
||||||||| ||||||||| || |||||||||||||||||| ||||||||||| || |||
Sbjct 612 AGTGGTGTGGTTATCTGTAATGTTGGTGTTGTCATGGTAGTTTTCTCAGACGTCCATGCA 671
Query 466 GGA-AGTAGAGCAGGAGGAAGTAATCCTGTTAAAGGAGATTTTCTAGTTTTAGCTGGAGC 524
|| | | |||| || ||||||||||| | |||||||||||||| ||| ||||||||||
Sbjct 672 GGGGA-TCGAGCTGGTGGAAGTAATCCCATCAAAGGAGATTTTCTTGTTATAGCTGGAGC 730
Query 525 AACTTTATATGCTGTCAGTAATACCAC-CGAGGAGTTCCTTGTGAAGAATGCAGGCACAG 583
||| || ||||||||||||||| || | |||||||||||||||||||||||| || ||
Sbjct 731 AACCTTGTATGCTGTCAGTAATGTCAGTC-AGGAGTTCCTTGTGAAGAATGCAGACAGAG 789
Query 584 TTGAGTTGATGAC-CTTCATGGGACTTTTTGGAGCCATTATTAGTGCCATTCAGGTA-GC 641
|| | | ||| | ||| |||| ||||| || || |||||| ||||||||||| || ||
Sbjct 790 TTCAACTCATGTCTCTTT-TGGGCCTTTTCGGCGCAATTATTGGTGCCATTCAGATAAGC 848
Query 642 CATATT 647
|||||
Sbjct 849 -ATATT 853
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 51037893352
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5