BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg898914
Length=2646
Score E
Sequences producing significant alignments: (Bits) Value
AT3G59580.1 | Symbols: | Plant regulator RWP-RK family protein... 3197 0.0
AT2G43500.1 | Symbols: | Plant regulator RWP-RK family protein... 702 0.0
> AT3G59580.1 | Symbols: | Plant regulator RWP-RK family protein
| chr3:22009051-22012766 FORWARD LENGTH=2884
Length=2884
Score = 3197 bits (1731), Expect = 0.0
Identities = 1966/2078 (95%), Gaps = 21/2078 (1%)
Strand=Plus/Plus
Query 582 GATGAAGCATGCATTAGATAACGAAGTCCGTGGTTCGATTGCAATTCCTGTCCTTGAAGC 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 766 GATGAAGCATGCATTAGATAACGAAGTCCGTGGTTCGATTGCAATTCCTGTCCTTGAAGC 825
Query 642 ATCTGG---TTCTTGTTGTACAGTCCTGGAACTTGTAACATGTAGGGAAAAACCAAACTT 698
||| || |||||||||| |||| ||||||||||| |||||||||||||||||||||||
Sbjct 826 ATCAGGTTCTTCTTGTTGTGCAGTTCTGGAACTTGTGACATGTAGGGAAAAACCAAACTT 885
Query 699 TGATGTGGAGATGGACTCTGTTTGCCGTGCTCTGCAGGCTGTGAACTTACAAACATCAAC 758
||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 886 TGATGTGGAGATGAACTCTGTTTGCCGTGCTCTGCAGGCCGTGAACTTACAAACATCAAC 945
Query 759 TATTCCTCGTTGTCAGTACCTTTCAAGTAATCAAAAAGAAGCTTTGGCTGAAATAAGAGA 818
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 946 TATTCCTCGTCGCCAGTACCTTTCAAGTAATCAAAAAGAAGCTTTGGCTGAAATAAGAGA 1005
Query 819 TGTTCTCAGAGCAGTGTGTC-ATGCACATAGGTTGCCTTTAGCTCTAGCTTGGATTCCCT 877
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 1006 TGTTCTCAGAGCAGTGTG-CTATGCACATAGGTTGCCTTTAGCTCTAGCTTGGATTCCCT 1064
Query 878 GTAGTTACTCCAAGGGAGCAAACGGTGAATTGGTAAAGATTTATGGCAAAAATTCAAAGG 937
||||||||||||| |||||||||| ||| ||||||||| ||||||| ||||| |||||||
Sbjct 1065 GTAGTTACTCCAAAGGAGCAAACGATGAGTTGGTAAAGGTTTATGGAAAAAACTCAAAGG 1124
Query 938 AATGTTCTCTTCTTTGCATAGAAGAGACAGCATGTTATGTGAATGATATGGAAATGGAAG 997
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1125 AATGTTCTCTTCTTTGCATAGAAGAGACATCATGTTATGTGAATGATATGGAAATGGAAG 1184
Query 998 GCTTTGTGAATGCATGCTTAGAGCTTTATCTAAGAGAAGGGCAAGGAATTGTTGGCAAAG 1057
|||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||
Sbjct 1185 GCTTTGTGAATGCATGTTTGGAGCATTATCTAAGAGAAGGGCAAGGAATTGTTGGCAAAG 1244
Query 1058 CACTCATATCAAACAAACCGTCTTTCTCATCTGATGTAAAGACATTTGATATCTGCGAGT 1117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1245 CACTCATATCAAACAAACCGTCTTTCTCATCTGATGTAAAGACATTTGATATCTGCGAGT 1304
Query 1118 ACCCTCTTGTTCAACATGCTCGAAAGTTTGGTCTTAATGCTGCAGTTGCTACCAAACTGA 1177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1305 ACCCTCTTGTTCAACATGCTCGAAAGTTTGGTCTTAATGCTGCAGTTGCTACCAAACTGA 1364
Query 1178 GGAGCACATTCACTGGTGACAGTGACTATATACTTGAGTTTTTCTTACCTGTAAGTATGA 1237
||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct 1365 GGAGCACATTCACTGGTGACAATGACTATATACTTGAGTTTTTTTTACCTGTAAGTATGA 1424
Query 1238 AGGGAAGCTCAGAACAACAACTTTTGCTGGACAGTCTCTCGGGCACGATGCAGAGAATAT 1297
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct 1425 AGGGAAGCTCAGAACAACAACTTTTGCTGGACAGTCTCTCGGGCACCATGCAGAGACTAT 1484
Query 1298 GTCGAACTCT-AAGAACTGTTTCAGATGCCGAATCAGCTGAAGGTACTGAATTTGGATTT 1356
|||| ||||| || ||||||||||||||| |||||| ||| ||||| |||||||||| |
Sbjct 1485 GTCGGACTCTGAA-AACTGTTTCAGATGCTGAATCAATTGACGGTACAGAATTTGGATCT 1543
Query 1357 CTTAGTGGAGAAATGACAAATCTCCCACAGGCTACTGTATCCGATGGAAGCTTTCAGACA 1416
| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct 1544 CGTAGTGTAGAAATGACAAATCTCCCACAGGCTACTGTATCCGTTGGAAGCTTTCATACG 1603
Query 1417 ACATTCCCGGATACTAACGTCAACTCTACTCGAAGTAACTTTTCGAACGTGTCCTCTGAT 1476
||||| | |||||| ||||||||||||||||||||| |||||||||| | |||||| ||
Sbjct 1604 ACATTTCTTGATACTGACGTCAACTCTACTCGAAGTACCTTTTCGAACATCTCCTCTAAT 1663
Query 1477 AAAAGAAATGAAATGGCAGGTTCTCAAGGCACTCTTCAGCAGGAAATTAGCGGAGCAAGA 1536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1664 AAAAGAAATGAAATGGCAGGTTCTCAAGGCACTCTTCAGCAGGAAATTAGCGGAGCAAGA 1723
Query 1537 AGATCAGAGAAGAAGAAAAGCAGTACAGAGAAGAATGTGAGCTTAAATGTTCTCCAACAA 1596
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1724 AGATTAGAGAAGAAGAAAAGCAGTACAGAGAAGAATGTGAGCTTAAATGTTCTCCAACAA 1783
Query 1597 TACTTCTCTGGGAGTTTAAAGGATGCTGCAAAAAGCCTTGGTGTTTGTCCAACTACACTT 1656
|||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1784 TACTTCTCTGGGAGCTTAAAGGATGCTGCAAAAAGCCTTGGTGTTTGTCCGACTACACTA 1843
Query 1657 AAACGGATATGTAGACAACACGGAATCATGAGATGGCCATCTCGCAAGATTAACAAAGTG 1716
||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 1844 AAAAGGATATGTAGACAACACGGAATTATGAGATGGCCATCTCGAAAGATTAACAAAGTG 1903
Query 1717 AATAGGTCACTAAGGAAAATACAGACAGTGCTTGACTCTGTCCAGGGTGTAGAAGGAGGA 1776
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1904 AATAGGTCACTAAGGAAAATACAGACGGTGCTTGACTCTGTCCAGGGTGTAGAAGGAGGA 1963
Query 1777 CTGAAATTTGACTCGGTAACAGGGGAATTTGTAGCAGTTGGCCCTTTTATATAAGAATTT 1836
||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1964 CTGAAGTTTGACTCGGTGACAGGGGAATTTGTAGCAGTTGGCCCTTTTATACAAGAATTT 2023
Query 1837 GATACTCAAAAGAGTCTGTCTTCTCATGATGAAGATGCACTTGCAAGAAGCCAAGGTGAT 1896
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2024 GGGACCCAAAAGAGTCTGTCTTCTCATGATGAAGATGCACTTGCAAGAAGCCAAGGTGAT 2083
Query 1897 ATGGATGAAGATGTGTCATTAGAGCCTTTGGAAGGTAAATCTCATGATGGTGGTGGGGTC 1956
|||||||||||||||||| ||||||||||||||| |||||||||||||||||| || |||
Sbjct 2084 ATGGATGAAGATGTGTCAGTAGAGCCTTTGGAAGTTAAATCTCATGATGGTGGCGGTGTC 2143
Query 1957 AAGTTGGAGGAGGATGTTGAAACAAACCA--A-GCAGAACCAGGATCCTTGAAGGAGCCA 2013
||||||||||||||||||||||||||||| | || | |||||||||||||||| |||||
Sbjct 2144 AAGTTGGAGGAGGATGTTGAAACAAACCACCAAGCGGGACCAGGATCCTTGAAGAAGCCA 2203
Query 2014 TGGACTTGGATAAGCAAACAGTCTGGCTTGATCTATAGTGATGATATTGATATAGGAAAA 2073
|||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 2204 TGGACTTGGATAAGCAAACAGTCTGGCTTGATCTATAGTGATGATACCGACATAGGAAAA 2263
Query 2074 AGGAGTGAAGAGGTAAAGAAGGATAAAGA---CCTTTGCGTTCGTAGGTGCTTGAGCTCT 2130
|| |||||||||||||| ||||||||||| |||||| ||||| |||||||||||||||
Sbjct 2264 AGAAGTGAAGAGGTAAACAAGGATAAAGAAGACCTTTGTGTTCGAAGGTGCTTGAGCTCT 2323
Query 2131 GTAGCACTTGCAGGCGATG-ATATGAATACAGGAATCGAGCGCGGTAATGGAA-TGGTAG 2188
|||||||||||||| |||| | ||||||||| |||||||||| |||||||||| || |||
Sbjct 2324 GTAGCACTTGCAGGTGATGGA-ATGAATACAAGAATCGAGCGAGGTAATGGAACTG-TAG 2381
Query 2189 AACCAAACCAATCCATATCAAGCAGCATGTCGGATTCATCAAATAGCTCAGGAGCAGTTT 2248
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2382 AACCAAACCACTCCATATCAAGTAGCATGTCGGATTCATCAAATAGCTCAGGAGCAGTTT 2441
Query 2249 TGTTGGGAAGTTCATCTACTTCCATGGAACAAAACTGGAACCAAATAAGAACTCATAACA 2308
|| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2442 TGCTGGGAAGTTCATCTGCTTCCTTGGAACAAAACTGGAACCAAATAAGAACTCATAACA 2501
Query 2309 ATAGCGGTGAGAGCGGATCAAGTTCAACACTGACAGTAAAAGCCACTTATAGAGAGGACA 2368
|||||||||| |||||||||||||||||||| || |||||||||||||| ||||||||||
Sbjct 2502 ATAGCGGTGAAAGCGGATCAAGTTCAACACTAACCGTAAAAGCCACTTACAGAGAGGACA 2561
Query 2369 CTGTACGTTTCAAGCTTGATCCATATC-TTGTTGGGTGTTCTCAGCTGTACAGAGAAGTG 2427
||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||
Sbjct 2562 CTGTACGTTTCAAGCTTGATCCATA-CGTTGTTGGGTGTTCTCAGCTCTACAGAGAAGTG 2620
Query 2428 GCTAAGCGTTTCAAGCTGCAAGAAAGTGCCTTTCAGTTGAAATACTTGGATGATGAAGAA 2487
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2621 GCTAAGCGTTTCAAGCTGCAAGAAGGTGCCTTTCAGTTGAAATACTTGGATGATGAAGAA 2680
Query 2488 GAATGGGTGATGTTGGTCACAGATTCTGATCTCCATGAATGCTTCGAGATATTAAACAGT 2547
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2681 GAATGGGTGATGTTGGTCACAGATTCTGATCTCCATGAATGCTTCGAGATATTAAATGGT 2740
Query 2548 ATGAGAAAACATACAGTAAAGTTTCTGGTCCGTGACATACCTGGAG-CCGCAATGGGAAG 2606
||||||||||||||||| ||||||||||||||||| ||||| | | |||||||||||||
Sbjct 2741 ATGAGAAAACATACAGTGAAGTTTCTGGTCCGTGATATACC-GAACACCGCAATGGGAAG 2799
Query 2607 TTCCGCAGGCAGCAATGGTTACCTCGGAGCAGGCACCT 2644
|||||||||||||||||||||||||||| |||||||||
Sbjct 2800 TTCCGCAGGCAGCAATGGTTACCTCGGAACAGGCACCT 2837
Score = 699 bits (378), Expect = 0.0
Identities = 506/562 (90%), Gaps = 31/562 (6%)
Strand=Plus/Plus
Query 1 ATGGAGAACCCATCATCATCCAGAG---ACAAAGGTTTCTGTTTTCCAGAAATTCCAGTA 57
||||||||||||||| ||||||||| | |||||||||||||||||||| |||||||||
Sbjct 155 ATGGAGAACCCATCAGCATCCAGAGATAATAAAGGTTTCTGTTTTCCAGATATTCCAGTA 214
Query 58 GAAGAAATGGATGGTTGGGTTAAGAATTTGATCTCTGAAGAAGATATGTTTAGCTCCTCT 117
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 215 GAAGAAATGGATGGCTGGGTTAAGAATTTGATCTCTGAAGAAGATATGTTTAGCTCCTCT 274
Query 118 TCAACTTCAGAGCTTATGAATTTTGAATCTTTTGCTTCATGGTGCAACAGCCCTTCCGCT 177
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 275 TCAACTTCAGAGCTTATGAATTTCGAATCTTTTGCTTCATGGTGCAACAGCCCTTCCGCT 334
Query 178 ACAGATATCTTGTTCTCTCAATACGGTTTATCGACCTGT--A-C------GCCTTTTGGA 228
|||||||||||||| ||||||||||||||||||||| | | | ||||| |||
Sbjct 335 GCAGATATCTTGTTCACTCAATACGGTTTATCGACCTCTCAATCTATTATACCTTTCGGA 394
Query 229 GGCTTAGAAGGCTCATACGCTGGCGAAAAAAGACCGACGAGTAGTTTATCCGGCGCAGTA 288
||||||||||||||||||||| |||| |||||| | | | ||| | | ||
Sbjct 395 GGCTTAGAAGGCTCATACGCTTGCGAGAAAAGA-C--C-----G-TTA----G-ACTGT- 439
Query 289 GACTGTAGTGTTCCAAGGTCATTGAACCACTCTCTTGATGAGAAGATGCTCAAAGCATTA 348
|| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct 440 -AC--TAGTGTTCCAAGGTCATTGAGCCATTCTCTTGATGAGAAGATGCTCAAAGCATTA 496
Query 349 AGTTTGTTTATGGAGTTCTCTGGAGAGGGAATCCTGGCACAGTTTTGGACTCCTATTAAG 408
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 497 AGTTTGTTTATGGAGTTCTCTGGAGAGGGAATTCTGGCACAGTTTTGGACTCCTATTAAG 556
Query 409 ACAGGAGATCAGTACATGCTTAGTACTTGTGATCAGGCGTATCTGCTTGACTCGAGGCTA 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 557 ACAGGAGATCAGTACATGCTTAGTACTTGTGATCAGGCGTATCTGCTTGACTCGAGGCTA 616
Query 469 TCCGGATACCGTGAAGTGTCGAGGAGGTTCACTTTCTCTGCAGAAGCAAATCAGGGCTCT 528
|| ||||||||||||| ||||||||| |||||||||||||| ||||||||||| |||||
Sbjct 617 TCTGGATACCGTGAAGCGTCGAGGAGATTCACTTTCTCTGCTGAAGCAAATCAATGCTCT 676
Query 529 TATCCAGATTTTC-AGGCAGAG 549
||||||| | ||| ||||||||
Sbjct 677 TATCCAGGTCTTCCAGGCAGAG 698
> AT2G43500.1 | Symbols: | Plant regulator RWP-RK family protein
| chr2:18061925-18066639 FORWARD LENGTH=3239
Length=3239
Score = 702 bits (380), Expect = 0.0
Identities = 856/1080 (79%), Gaps = 55/1080 (5%)
Strand=Plus/Plus
Query 583 ATGAAGCATGC-ATTAGATAACGAAGTCCGTGGTTCGATTGCAATTCCTGTCCTTGAAGC 641
||||||||||| ||| || || |||||||||||||| |||||||| ||| ||||||||||
Sbjct 996 ATGAAGCATGCAATT-GACAATGAAGTCCGTGGTTCCATTGCAATACCTATCCTTGAAGC 1054
Query 642 ATCT-GG--TTCTTGTTGTACAGTCCTGGAACTTGTAACATGTAGGGAAAAACCAAACTT 698
||| || ||||||||| | ||| ||||||| || |||| | ||||||||| || ||
Sbjct 1055 TTCTGGGACATCTTGTTGTGCTGTCATGGAACTCGTTACATCCAAGGAAAAACCTAATTT 1114
Query 699 TGATGTGGAGATGGACTCTGTTTGCCGTGCTCTGCAGGCTGTGAACTTACAAACATCAAC 758
|||| |||||||||||||||||||||||||||| |||||||| ||||||| ||| || |
Sbjct 1115 TGATATGGAGATGGACTCTGTTTGCCGTGCTCTCCAGGCTGTAAACTTACGGACAGCAGC 1174
Query 759 TATTCCTCGTTGTCAGTACCTTTCAAGTAATCAAAAAGAAGCTTTGGCTGAAATA-AGAG 817
||||||||| |||||| |||||||||| ||||| ||| || || ||||||||| | ||
Sbjct 1175 CATTCCTCGTCCTCAGTATCTTTCAAGTAGTCAAAGAGATGCCTTAGCTGAAATACA-AG 1233
Query 818 ATGTTCT-CAGAGCAGTGTGTCATGCACATAGGTTGCCTTTAGCTCTAGCTTGGATTCCC 876
||||||| | || |||| ||||||||||| | |||||| |||||||| || ||||||||
Sbjct 1234 ATGTTCTTC-GAACAGTATGTCATGCACACAAGTTGCCCTTAGCTCTTGCCTGGATTCCT 1292
Query 877 TGTAGTTACTCCAAGGGAGCAAACGGTGAATTGGTAAAGATTTATGG-CAAAAATTCAAA 935
||||| | |||| | ||| | | || || | ||| ||| ||||||| |
Sbjct 1293 TGTAG--A----AAGG-ATCAATCTAT-AA--GG----G-TTTCTGGACAAAAAT-CTG- 1335
Query 936 G-GAATGTTCTCTTCTTTGCATAGAAGAGACAGCATGTTATGTGAATGATATGGAAATGG 994
| ||| || | | ||||||||||| |||||||| ||||||||||| |||||||| ||||
Sbjct 1336 GTGAAAATTGTATACTTTGCATAGAGGAGACAGCTTGTTATGTGAACGATATGGAGATGG 1395
Query 995 AAGGCTTTGTGAATGCATGCTTAGAGCTTTATCTAAGAGAAGG-GCAAGGAATTGTTGGC 1053
||||||||||| | ||||| || |||| || |||||||||| | |||||||||||||
Sbjct 1396 AAGGCTTTGTGCACGCATGTTTGGAGCATTGTCTAAGAGAAAAAG-AAGGAATTGTTGGT 1454
Query 1054 AAAGCACTCATATCAAACAAACCGT-CTTTCTCATCTGATGTAAAGACATTTGATATCTG 1112
||||| ||||||| ||| | |||| |||| || |||||||| ||| ||| ||| ||| |
Sbjct 1455 AAAGCTTTCATATCCAACCAGCCGTTCTTT-TCTTCTGATGTGAAGGCATATGACATCAG 1513
Query 1113 CGAGTACCCTCTTGTTCAACATGCTCGAAAGTTTGGTCTTAATGCTGCAGTTGCTACCAA 1172
|| |||||| ||||||| ||||||||||||| ||||| |||||||| || |||| ||
Sbjct 1514 TGAATACCCTATTGTTCAGCATGCTCGAAAGTACGGTCTGAATGCTGCTGTCGCTATAAA 1573
Query 1173 ACTGAGGAGCACATT-CACTGGTGACAG-TGACTATATACTTGAGTTTTTCTTACCTGTA 1230
|||||||||||| || ||||||||| || ||| || |||||||| | ||||| ||||||
Sbjct 1574 ACTGAGGAGCAC-TTACACTGGTGA-AGATGATTACATACTTGAACTGTTCTTGCCTGTA 1631
Query 1231 AGTATGAAGGGAAGCTCAGAACAACAACTTTTGCTGGACAGTCTCTCGGGCACGATGCAG 1290
|||||||| ||||||| |||||||||||| | | ||||| || ||||| || ||||||
Sbjct 1632 AGTATGAAAGGAAGCTTGGAACAACAACTTCTATTAGACAGCCTTTCGGGTACAATGCAG 1691
Query 1291 AGAATATGTCGAACTCTAAGAACTGTTTCAGATGCCGAATCAGCT------GAAGGTACT 1344
||||| ||||||||| | |||||||||||||| | | ||| || ||||| |||
Sbjct 1692 AGAATTTGTCGAACTTTGAGAACTGTTTCAGAAGTGGGGTCAACTAAAAAAGAAGGGACT 1751
Query 1345 GAATTTGGATTTCTTAGTGGAGAAATGACAAATCTCCCACAGGCTACTGTATCCGATGGA 1404
|| |||||||| ||| | || ||| | ||| |||| ||| | || || | | | | |
Sbjct 1752 AAACCTGGATTTCGGAGTAGTGATATGTCTAATTTCCCGCAGACAAC-GTCTTC-A-GAA 1808
Query 1405 AGCTTTCAGACAACATTCCC-GGATACTAACGTC-AACTCTACTCGAAGTAACTTTTCGA 1462
| |||||||||| || | |||| | | || ||||||||| |||| | ||||||
Sbjct 1809 AATTTTCAGACAATAT-CATTGGATTCCGA-GTTTAACTCTACTAGAAGCATGTTTTCGG 1866
Query 1463 ACGTGTCCTCTGATAAAAGAAATGAA-ATGGCAGGT-TCTCAAGGCACTCTTC-AGCAGG 1519
|||||||||||||| |||| | || ||| | |||||||||||| || ||||||
Sbjct 1867 GTATGTCCTCTGATAAA-GAAAACAGTATCACAG-TATCTCAAGGCACT-TTGGAGCAGG 1923
Query 1520 AAATTAGCGGAGCAAGAAGATCAGAGAAGAAGAAAAGCAGTACAGAGAAGAATGTGAGCT 1579
| | ||| |||||||| | |||||||||||||||||| ||||||||| ||||||||||
Sbjct 1924 ATGTGAGCAAAGCAAGAACACCAGAGAAGAAGAAAAGCACTACAGAGAAAAATGTGAGCT 1983
Query 1580 TAAATGTTCTCCAACAATACTTCTCTGGGAGTTTAAAGGATGCTGCAAAAAGCCTTGGTG 1639
||| | |||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 1984 TAAGCGCTCTCCAACAACACTTCTCTGGGAGTCTAAAGGATGCTGCAAAAAGCCTTGGTG 2043
Score = 315 bits (170), Expect = 2e-84
Identities = 330/404 (82%), Gaps = 24/404 (6%)
Strand=Plus/Plus
Query 2188 GAACCAAACCAATCCATATCAAGCAGCATGTCGGATTCATCAAATAGCTCAGGAGCAGTT 2247
||||| ||||||||||| ||| ||||||| || |||||||||||| ||||||| ||||||
Sbjct 2601 GAACCTAACCAATCCATGTCATGCAGCATATCAGATTCATCAAATGGCTCAGGCGCAGTT 2660
Query 2248 TTGTTG-GGAAGTTCATCTACTTCCATGGAACAAAACTGGAACCAAATAAGAACTCATAA 2306
|| | ||||| |||||||||||||||| || | ||||||||||| ||||| || ||
Sbjct 2661 CTG-CGTGGAAGCTCATCTACTTCCATGG---AAGATTGGAACCAAATGAGAACCCACAA 2716
Query 2307 C---AATAGCGGTGAGAGCGGATCAAGTTCAACACTGA-CAGTAAAAGCCACTTATAGAG 2362
| |||||| | ||||| ||||||| |||| |||| | ||||| |||| ||||||||
Sbjct 2717 CAGTAATAGCAGCGAGAGTGGATCAA---CAACGCTGATC-GTAAAGGCCAGTTATAGAG 2772
Query 2363 AGGACACTGTACGTTTCAAGCTT-GATCCATATCTTGTTGGGTGTTCTCAGCTGTACAGA 2421
| |||||||||||||||||| || || || ||| ||||||||| ||||||| |||| |
Sbjct 2773 AAGACACTGTACGTTTCAAG-TTCGAGCC--ATC-AGTTGGGTGTCCTCAGCTCTACAAA 2828
Query 2422 GAAG-TGGCTAAGCGTTTCAAGCTGCAAGAAAGTG-CCTTTCAGTTGAAATACTTGGATG 2479
|||| ||| || ||||| || |||| || | | | | |||||| |||| ||||||||||
Sbjct 2829 GAAGTTGG-AAAACGTTTTAAACTGC-AGGACGGGTCGTTTCAGCTGAAGTACTTGGATG 2886
Query 2480 ATGAAGAAGAATGGGTGATGTTGGTCACAGATTCTGATCTCCATGAATGCTTCGAGATAT 2539
|||||||||||||||||||| |||| ||||||||||||||||| ||||| || |||||||
Sbjct 2887 ATGAAGAAGAATGGGTGATGCTGGTTACAGATTCTGATCTCCAAGAATGTTTGGAGATAT 2946
Query 2540 TAAACAGTATGAGAAAACA-TACAGTAAAGTTTCTGGTCCGTGA 2582
|| | ||||| ||||||| | | || |||||||| || |||||
Sbjct 2947 TACATGGTATGGGAAAACACT-CGGTGAAGTTTCTCGTTCGTGA 2989
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 131387223717
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5