BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg899066 Length=375 Score E Sequences producing significant alignments: (Bits) Value AT3G61090.1 | Symbols: | Putative endonuclease or glycosyl hyd... 494 3e-139 > AT3G61090.1 | Symbols: | Putative endonuclease or glycosyl hydrolase | chr3:22609040-22609822 REVERSE LENGTH=597 Length=597 Score = 494 bits (267), Expect = 3e-139 Identities = 347/384 (90%), Gaps = 12/384 (3%) Strand=Plus/Plus Query 1 GTTTATGGTGAGAAGACTAATAAGTTCAAGGATGACTTTCTCCTCGCTGATATCATGTTC 60 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 163 GTTTATGGTGAGAGGACTAATAAGTTCAAGGATGACTTTCTCCTCGCTGATATCATGTTC 222 Query 61 TTACCCGCAG-A--TGCAAG-AGCGAGATATATGAGGATGGGGAATGATTTCTTTTGCTG 116 |||||||||| | || ||| |||||||| |||||||||| | ||||||||||||||||| Sbjct 223 TTACCCGCAGGAGATG-AAGGAGCGAGATTTATGAGGATGTGTAATGATTTCTTTTGCTG 281 Query 117 GGGATTTGACAATCGTAAATCAACTTTGATGGTAATGTCACGAGACAACACTGAGTTCGC 176 |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 282 GGGAAATGACAATCGTAAATCAACTTTGATGGTAATGTCACGAGACAGCACTGAGTTCGC 341 Query 177 CTCTTCTCTCATAATGTACAAGAACTTGAATTTCAACATTCTCGTAGCACAGCCAGAAAA 236 ||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 342 CTCTTCTTTCGTAATGTACAAAAACTTGAATTTCAACATTCTCGTAGCACAGCCAGAAAA 401 Query 237 CGCACACA-AAAGATGTTCTAACTGCAGAAAGCCTTTGGACGA-GATTATCACCGATGAA 294 || | ||| ||| |||| || |||||||||||||||||| | ||| ||||| || ||| Sbjct 402 CGTAGACAGAAA-ATGTCCTGTCTGCAGAAAGCCTTTGGAA-ATGATCATCACTGACGAA 459 Query 295 TGGATTTGGGAAAGTCTCTCAGCTGGAGGAGACCCTATTACCAAAACCCAAGAA---CCA 351 ||| |||||||||| ||||| ||||||||||||||| | |||||||||||||| ||| Sbjct 460 TGGGTTTGGGAAAGCCTCTCTGCTGGAGGAGACCCTCTCCCCAAAACCCAAGAAGAACCA 519 Query 352 GACCTTAGTAACTCTTGTCATTAA 375 |||||||||||||||||||||||| Sbjct 520 GACCTTAGTAACTCTTGTCATTAA 543 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 17643979899 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5