BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg899272
Length=1047
Score E
Sequences producing significant alignments: (Bits) Value
AT3G62860.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1712 0.0
AT2G47630.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 669 0.0
> AT3G62860.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr3:23239446-23242251 REVERSE LENGTH=1286
Length=1286
Score = 1712 bits (927), Expect = 0.0
Identities = 1007/1047 (96%), Gaps = 0/1047 (0%)
Strand=Plus/Plus
Query 1 ATGATGAAGTTCAAGTTCGAATACGAAGAGGAATACATAAAAAACTCAAGAGGCGTAGAG 60
|||||||||||||||||| | ||||| ||||||||||| |||||||| |||| ||| |||
Sbjct 109 ATGATGAAGTTCAAGTTCCAGTACGAGGAGGAATACATCAAAAACTCGAGAGACGTTGAG 168
Query 61 CTGTTCGCTTGCAGATGGGTTCCCTCTTCTTCTCCCCGAGCTCTAGTCTTCCTCTGTCAT 120
||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||
Sbjct 169 TTGTTCGCTTGCAGATGGCTTCCTTCTTCTTCTCCCCGAGCTCTAGTCTTCCTCTGCCAT 228
Query 121 GGTTATGGGATGGAGTGCAGTAGCTTCATGAGAGAATGCGGAATACGGTTGGCATCAGCA 180
|||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 229 GGTTATGGAATGGAGTGCAGTAGCTTCATGAGAGAATGCGGAATACGGCTGGCATCAGCG 288
Query 181 GGATATGCAGTGTTTGGGATGGACTACGAGGGGCATGGTCGGTCCAAGGGTGCTCGTTGC 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 289 GGATATGCAGTGTTTGGGATGGACTACGAGGGGCATGGTCGGTCCAAGGGTGCTCGTTGC 348
Query 241 TATATCAAAAAGTTCAGTAACATAGTAAACGACTGCTACGACTATTACACCTTCATCTCT 300
||||| ||||| |||||||| |||||||| ||||||| ||||||||||| | |||||||
Sbjct 349 TATATAAAAAAATTCAGTAATATAGTAAATGACTGCTTTGACTATTACACATCCATCTCT 408
Query 301 GCACAAGAAGAATACAAAGAGAAAGGTAAATTTTTGTATGGAGAATCAATGGGAGGCGCA 360
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct 409 GCACAAGAAGAATACAAAGAGAAAGGTAGATTTTTGTATGGAGAATCAATGGGAGGTGCA 468
Query 361 GTTGCTTTGTTGCTTCACAAGAAAGATCCTTCTTTTTGGAACGGTGCTCTTCTCGTTGCT 420
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 469 GTTGCTTTGTTGCTTCACAAGAAAGATCCTTCTTTTTGGAACGGGGCTCTTCTCGTTGCT 528
Query 421 CCCATGTGTAAGATATCAGAGAAGGTGAAACCACACCCAGTAGTCATAAATCTACTAACG 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 529 CCCATGTGTAAGATATCAGAGAAGGTGAAACCACACCCAGTAGTCATAAATCTACTAACG 588
Query 481 AGAGTTGAAGATATAATACCAAAATGGAAGATCGTTCCCACAAAAGATGTTATCGATGCT 540
|||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 589 AGAGTTGAAGATATTATACCAAAATGGAAGATAGTTCCTACAAAAGATGTTATCGATGCT 648
Query 541 GCCTTCAAGGATCCAATCAAGCGCGAAGAGATAAGGAACAACAAGCTGATATATCAAGAC 600
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 649 GCCTTCAAGGATCCGGTCAAGCGCGAAGAGATAAGGAACAACAAGCTGATATATCAAGAC 708
Query 601 AAGCCAAGACTTAAAACCGCGCTTGAAATGCTTAGAACGAGCATGGACCTTGAAGACACT 660
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 709 AAGCCAAGACTTAAAACCGCACTTGAAATGCTTAGAACGAGCATGGACCTTGAAGACACT 768
Query 661 CTCCACGAGATCACATTGCCTTTCTTTGTCCTTCACGGTGAAGCAGACATTGTGACTGAT 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 769 CTCCACGAGATCACATTGCCTTTCTTTGTCCTTCACGGTGAAGCAGACATTGTGACTGAT 828
Query 721 CCAGAGATAAGCAAAGCCTTGTTCGAGAAGGCAAGCACACGCGACAAAACTATTAAGCTT 780
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 829 CCAGAGATAAGCAAAGCCTTGTTCGAGAAGGCAAGCACACGCGACAAAACCATTAAACTT 888
Query 781 TACCCAGGCATGTGGCATGGATTAACTTCTGGTGAGCCTGATGCTAACGTTGACCTCGTT 840
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TACCCAGGAATGTGGCATGGATTAACTTCTGGTGAGCCTGATGCTAACGTTGACCTCGTT 948
Query 841 TTTGCTGACATAGTCAACTGGCTTGATGCTCGTACCGGTGACTCGGCTTCTCTGACAGTT 900
||||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||||
Sbjct 949 TTTGCTGACATTGTCAATTGGCTTGATGCTCGTACCGGCGACTCCGCTTCTCTGACAGTC 1008
Query 901 AATCCCGTACATGATTTTACCTCCAATGTTCAAAAGGTCGTTGACGGTGTTAGTAACGGT 960
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1009 ACTCCCGTACATGATTTTACCTCCAATGTTCAAAAGGTCGTTGACGGTGTTAGTAACGGT 1068
Query 961 CAAGGAAAATCTAAACGACCACAAGCTAGTCTCCTTTGTGGTTTAAATGGTGGTGGACGT 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1069 CAAGGAAAATCTAAACGACCACAAGCTAGTCTCCTTTGTGGTTTAAATGGTGGTGGACGT 1128
Query 1021 CGTTTGGTCCATAGATCTTCTATGTAA 1047
|||||||||||||||||||||||||||
Sbjct 1129 CGTTTGGTCCATAGATCTTCTATGTAA 1155
> AT2G47630.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr2:19534503-19537014 FORWARD LENGTH=1293
Length=1293
Score = 669 bits (362), Expect = 0.0
Identities = 729/902 (81%), Gaps = 42/902 (5%)
Strand=Plus/Plus
Query 16 TTCGAATACGAAGAGGAATACATAAAAAACTCAAGAGGCGTAGAGCTGTTCGCTTGCAGA 75
||| ||||| | ||||||||| | | ||| |||||||| |||||| ||||||| || |||
Sbjct 150 TTCCAATACCACGAGGAATACGTGAGAAATTCAAGAGGTGTAGAGTTGTTCGCATGTAGA 209
Query 76 TGGGTTCCC-TCTTC-T--TC-TC-CCC-GAGCTCTAGTCTTCCTCTGTCATGGTTATGG 128
| || |||| ||||| | || || ||| |||||| || |||||||| |||||||||||
Sbjct 210 T-GGATCCCATCTTCTTCGTCTTCTCCCAAAGCTCTGGTTTTCCTCTGCCATGGTTATGG 268
Query 129 GATGGAGTGCAGTAG-CTTCATGAGAGAATGCGGAATAC-GGTTGGCATCAGCAGGATAT 186
|||||||| || | || ||||| |||||||||||| | || |||| ||||| |||||
Sbjct 269 AATGGAGTGTAG-CGACTCCATGAAAGAATGCGGAAT-CAGGCTGGCTTCAGCTGGATAC 326
Query 187 GCAGTGTTTGGGATGGACTACGAGGGGCATGGTCGGTCCAAGGG-TGCTCGTTGCTATAT 245
|| || ||||| |||||||| || || ||||| |||||| ||| | |||||||||| ||
Sbjct 327 GCGGTTTTTGGTATGGACTATGAAGGTCATGGAAGGTCCATGGGAT-CTCGTTGCTACAT 385
Query 246 CAAAAAG-TT-CAGTAACATAGTAAACGACTGCTACGACTATTACACCTTC-ATCTCTGC 302
||| ||| || | | || | || || || ||||| ||||| |||| | || || | |||
Sbjct 386 CAAGAAGTTTGC-G-AATGTTGTGAATGATTGCTATGACTACTACA-CATCTATTTGTGC 442
Query 303 ACAAGAAGAATACAAAGAGAAAGGTAAATTTTTGTATGGAGAATCAATGGGAGGCGCAGT 362
||||| || |||| || ||||| | ||| |||||||||||||| ||||||||||||||
Sbjct 443 GCAAGAGGAGTACATGGACAAAGGCAGATTCTTGTATGGAGAATCCATGGGAGGCGCAGT 502
Query 363 TGCTTTGTTGCTTCACAAGAAAGATCCTTCT-TTTTGGAACGGTGCTC-TTCTCGTTGCT 420
|||| ||||||||||| |||||||||| | ||||||||||| || | |||| ||||||
Sbjct 503 CACTTTATTGCTTCACAAAAAAGATCCTT-TGTTTTGGAACGGCGC-CATTCTAGTTGCT 560
Query 421 CCCATGTGTAAGATATCAGAGAAGGTGAAACCACACCC-AGTAGTCATAAATCTACTAAC 479
|| |||||||||||||| ||||||||||| |||||||| | |||| || ||||| ||||
Sbjct 561 CCAATGTGTAAGATATCTGAGAAGGTGAAGCCACACCCTA-TAGTGATTAATCTGTTAAC 619
Query 480 GAGAGTTGAAGATATAATACCAAAATGGAAGATCGTTCCCACAAAAGATGTTATCGATGC 539
||||| ||||| || ||||| |||||||| || ||||| |||||||| || || || ||
Sbjct 620 TAGAGTCGAAGAAATCATACCTAAATGGAAAATAGTTCCAACAAAAGACGTGATTGACGC 679
Query 540 TGCCTTCAAGGATCC-AATCAAGCGCGAAGAGATAAGGAACAACAAGCTGATATATCAAG 598
||| |||||||| || ||||||| |||||| |||||||||||||||||||||||||||
Sbjct 680 TGCTTTCAAGGA-CCTCGTCAAGCGAGAAGAGGTAAGGAACAACAAGCTGATATATCAAG 738
Query 599 ACAAGCCAAGACTTAAAACCGCGCTTGAAATGCTTAGAACGAGCATGGACCTTGAAGACA 658
||||||| || || |||||||| ||||| |||||||| || |||||| |||| |||||||
Sbjct 739 ACAAGCCTAGGCTCAAAACCGCACTTGAGATGCTTAGGACAAGCATGAACCTAGAAGACA 798
Query 659 CTCTCCACGAGATCACATTGCCTTTCTTTGTCCTT-CACGGTGAAGCAGACATTGTGACT 717
||||||||||||| ||| |||| |||||||| || ||||| |||||||| | |||||
Sbjct 799 CTCTCCACGAGATAACAATGCCATTCTTTGTA-TTACACGGAGAAGCAGATACAGTGACG 857
Query 718 GATCCAGAGATAAGCAAAGC-CTTGTTCGAGAAGGCAAGCACACGCGACAAAACTATTAA 776
||||||||| |||||||||| || || |||||| || |||||| | ||||| || | ||
Sbjct 858 GATCCAGAGGTAAGCAAAGCTCT-GTACGAGAAAGCTAGCACAAGGGACAAGACGCTCAA 916
Query 777 GCTT-TACCCAGGCATGTGGCATGGAT-TAACTTCTGGTGAGCCTGA-TGCTAACGTTGA 833
| || || ||||| |||||||| | | | || || ||||||||||| || |||||| ||
Sbjct 917 G-TTGTATCCAGGGATGTGGCACGC-TCTGACGTCAGGTGAGCCTGACTG-TAACGTGGA 973
Query 834 CCTCGTTTTTGCTGACAT-AGTCAACTGGCTTGATGCT-CGTACCGGTGACTCGGCTTCT 891
||| |||||||||||||| | |||| |||||||| || || |||| |||| | || |||
Sbjct 974 CCTTGTTTTTGCTGACATCA-TCAATTGGCTTGAC-CTTCGAACCGCTGACCCTGCCTCT 1031
Query 892 CT 893
||
Sbjct 1032 CT 1033
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 51339298234
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5