BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg899363 Length=423 Score E Sequences producing significant alignments: (Bits) Value AT2G21045.1 | Symbols: | Rhodanese/Cell cycle control phosphat... 654 0.0 AT2G20993.1 | Symbols: | Pseudogene of AT2G21045 | chr2:901857... 211 4e-54 > AT2G21045.1 | Symbols: | Rhodanese/Cell cycle control phosphatase superfamily protein | chr2:9027852-9029020 FORWARD LENGTH=731 Length=731 Score = 654 bits (354), Expect = 0.0 Identities = 400/423 (95%), Gaps = 0/423 (0%) Strand=Plus/Plus Query 1 ATGGAGGAAACAAAACCAAAGACAGTTGAAGATGTTGAGACGGTTGATGTTTACACAGCT 60 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||| Sbjct 94 ATGGAGGAAACAAAACCAAAGACCGTTGAAGATGTTGAGACCGTTGATGTTTATACAGCT 153 Query 61 AAAGGTTTTCTTAGTACTGGTCATCGATATCTCGATGTAAGGACAAATGAAGAATTCGCC 120 ||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| Sbjct 154 AAAGGCTTTCTTAGTACTGGTCACCGATATCTCGACGTAAGGACAAATGAAGAATTTGCC 213 Query 121 AAGAGTCATGTTGAGGATGCTTTGAACATTCCTTATATGTTCCAAACAGATGAAGGTAGG 180 ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct 214 AAGAGTCATGTTGAGGAGGCTTTGAACATTCCTTATATGTTCAAAACAGATGAAGGTAGG 273 Query 181 GTTATAAATCCTGATTTTCTTCCTCAAGTGGCATCGGTTTGCAAGAAAGATGAACATATG 240 ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| || Sbjct 274 GTTATAAATCCTGATTTCCTTTCTCAAGTGGCATCGGTTTGCAAGAAAGATGAACATTTG 333 Query 241 ATCGTGGCTTGTAACGCTGGAGGAAGAGGAAGTCGTGCTTGTGTTGATCTTCTCAATGCG 300 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| || | | Sbjct 334 ATCGTGGCTTGTAACGCTGGAGGAAGAGGAAGTCGTGCTTGCGTTGATCTTCTTAACGAG 393 Query 301 GGGTACGAGCATGTGGCTAACATGGGGGGAGGCTACTCGGCTTGGGTTGATGCTGGATTC 360 |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 394 GGGTACGACCATGTGGCTAACATGGGGGGAGGCTACTCGGCTTGGGTTGACGCTGGATTC 453 Query 361 GCCGGCGACAAACCCCCGGAAGAGCTCAAGATTGCTTGCCAGTTCCGACCAAAGGAAAAC 420 ||||| ||||||||||||||||| ||||||||||||||| ||||| | |||||||||||| Sbjct 454 GCCGGGGACAAACCCCCGGAAGACCTCAAGATTGCTTGCAAGTTCAGGCCAAAGGAAAAC 513 Query 421 TAA 423 ||| Sbjct 514 TAA 516 > AT2G20993.1 | Symbols: | Pseudogene of AT2G21045 | chr2:9018578-9019036 FORWARD LENGTH=378 Length=378 Score = 211 bits (114), Expect = 4e-54 Identities = 139/151 (92%), Gaps = 1/151 (1%) Strand=Plus/Plus Query 96 TGTAAGGACAAATGAAGAATTCGCCAAGAGTCATGTTGAGGATGCTTTGAACATTCCTTA 155 ||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct 229 TGT-AGGACAAATGAAGAATTTGCCAAGAGTCATGTTGAGGAGGCTTTGAACATTCCTGG 287 Query 156 TATGTTCCAAACAGATGAAGGTAGGGTTATAAATCCTGATTTTCTTCCTCAAGTGGCATC 215 || |||| |||||||||| ||||||||||||||||||||||| ||| ||||||||||||| Sbjct 288 TACGTTCAAAACAGATGAGGGTAGGGTTATAAATCCTGATTTCCTTTCTCAAGTGGCATC 347 Query 216 GGTTTGCAAGAAAGATGAACATATGATCGTG 246 |||||||||||||||| ||||| |||||||| Sbjct 348 GGTTTGCAAGAAAGATAAACATTTGATCGTG 378 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 20056831851 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5