BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg899566
Length=2427
Score E
Sequences producing significant alignments: (Bits) Value
AT2G22740.2 | Symbols: SUVH6 | SU(VAR)3-9 homolog 6 | chr2:9662... 2748 0.0
AT2G35160.1 | Symbols: SUVH5, SGD9 | SU(VAR)3-9 homolog 5 | chr... 562 6e-159
> AT2G22740.2 | Symbols: SUVH6 | SU(VAR)3-9 homolog 6 | chr2:9662638-9666981
REVERSE LENGTH=2588
Length=2588
Score = 2748 bits (1488), Expect = 0.0
Identities = 2150/2454 (88%), Gaps = 108/2454 (4%)
Strand=Plus/Plus
Query 1 ATGGAAATGGGTGTTATGGAGAATTCGATGGTGCATACGGAGACATCAAAGGTTAAGTCG 60
||||||||||| ||||||||||||| |||||| |||||||||| |||||||||||||||
Sbjct 126 ATGGAAATGGGAGTTATGGAGAATTTGATGGTACATACGGAGATATCAAAGGTTAAGTC- 184
Query 61 T-TGAGTAATGGTGAGGTTTTAGTGGAGAAACGAGGAGTGTCAGTTTTGGAGAATGGTGG 119
| ||| |||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct 185 TCAGAGCAATGGTGA-G-----GTGGAGAAACGAGGAGTGTCAGTTTTGGAGAATGGTGG 238
Query 120 TGTTTGCAAGCTTGATCGAATGACG-GGGCTTAAGTTTAAGCGCCGGAAGGTTTTTGCTG 178
||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||
Sbjct 239 TGTTTGCAAGCTTGATCGAATGA-GTGGGCTTAAGTTTAAGCGTCGGAAGGTTTTTGCTG 297
Query 179 TGAGGGATTTTCCGCCGGGGTGCGGGACCCGTGTGGAGCGGTTTGGGTCGATGGAAGTGA 238
||||||| ||||| || |||| ||||| | | | | | ||||||||||
Sbjct 298 TGAGGGACTTTCCACC-GGGT----------TGTGGTTC-G--AGAG-CAATGGAAGTGA 342
Query 239 AGAGTGCTTGTGAGAATGGGAATGTTGCTGAAGATGTTAAGGTTGTTGAGTCTTTAGTTA 298
||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct 343 AGATTGCTTGTGAGAATGGGAATGTTGTTGAAGATGTTAAGGTTGTTGAGTCTTTGGTTA 402
Query 299 AAGAGGAGAGAGATGGTGGTGTGGATGTATCAGGTGGAGAACTGGAAGCGGAGAATGGGA 358
|||||||| |||| || | ||| | || | ||| | | | | || || | ||
Sbjct 403 AAGAGGAG-GAGA--GT--T-TGG--G--GCA-G-AGAG-A-T-GCCTCTGAAAACGTGA 447
Query 359 GTGATGTTAGTATGGCTGAGGCGGTGGAGGTTCAGCCGT-TGAGCATTTGTTTGCCAGAA 417
||||| | || ||||||||| |||||||||||||||| | |||| ||||||||||||| |
Sbjct 448 GTGATATCAGAATGGCTGAGCCGGTGGAGGTTCAGCC-TCTGAGAATTTGTTTGCCAGGA 506
Query 418 GGGGATGTGG--AGAGAAATGT-TG-AACAGACTGTGGAGGTTGCTGGGTCGATGGGACA 473
|| ||||||| ||||| ||| || || | | | ||| | | | || | | |||
Sbjct 507 GGTGATGTGGTAAGAGACTTGTCTGTTACCG-C-G-GGA-G--AC-GAGT-GTTCAAACA 558
Query 474 GAGCTTGGTTCTTGAGGATTCGGGTTCTGGTGCTAGCAGCAGCGGAACAACTGAAAACAT 533
| | | ||| || |||||||||||| |||||||||| | ||||||||||||
Sbjct 559 GTGAACAG--ATTGTGG---CGGGTTCTGGTGTTAGCAGCAGCAGCGGAACTGAAAACAT 613
Query 534 GGTGAGGGATGTCGTTGTTTATGCAGATGAGAGCAGTCTGGGAATAGATGATTTGGATTA 593
|| |||||| |||||||||| ||||||||||||||||| ||||| ||| |||||||| |
Sbjct 614 TGTCAGGGATATCGTTGTTTACGCAGATGAGAGCAGTCTAGGAATGGATAATTTGGATCA 673
Query 594 TACTGAGCCGTTGGAAATTGAGATGTCAGATGTTTCTGTTGCAAAACCGAGTCTTGTTGC 653
||| ||||| | |||||||| |||||||||||| | |||||||||||||| ||||||||
Sbjct 674 AACTCAGCCGCTAGAAATTGAAATGTCAGATGTTGCAGTTGCAAAACCGAGGCTTGTTGC 733
Query 654 GGGTAG-AAGAAAGGCAAAGAAAGGAATTGCATTTCATTCATCCTTGAAGCTTACCAAAA 712
|||||| ||| |||||||||||||||||||||| |||||||||||||||| ||
Sbjct 734 GGGTAGAAAG-AAGGCAAAGAAAGGAATTGCATGTCATTCATCCTTGAAGGTT------- 785
Query 713 AGAACAACCGAGAGTATGGTGAAGGATCTAGTAAGAGGAACAGTAAG-AGCAATATATAT 771
| | |||||||| ||||||||||||||| |||| ||| |||||| || ||| |||||
Sbjct 786 -G-TTAGCCGAGAGTTTGGTGAAGGATCTAGGAAGAAGAAGAGTAAGAAG-AATTTATAT 842
Query 772 TGGCTTTATAGGGAAAGTCTGGATTTTCCTCATCAGGAAAC--AT-CTCGGGAGCTTCGG 828
|||| | |||||||||||||||||| |||| | || | | || || || | || ||
Sbjct 843 TGGCGTGATAGGGAAAGTCTGGATTCTCCTGAGCA-GCTTCGGATACT-AGGTG-TT-GG 898
Query 829 ATACTAG-ATGTTGGTTCAAGCAGTGGTGATGATAGTATTCGGAACAAAGTTAAGGAAAC 887
|| || | | ||||||||||| | | |||||||| |||||||||||| ||||||||
Sbjct 899 -GACAAGCA-G-CGGTTCAAGCAG-CG-G-TGATAGTAGTCGGAACAAAGTAAAGGAAAC 952
Query 888 TCTGCGTCTTTTCCATGGCGTGTGCA-AAAGGATTTTGCAGGAGGATGAAGCAAAGCCTG 946
||| ||||||||||||||||| |||| ||| |||| ||||||||||||||||||||||||
Sbjct 953 TCTACGTCTTTTCCATGGCGTTTGCAGAAA-GATTCTGCAGGAGGATGAAGCAAAGCCTG 1011
Query 947 AGGACCAAAGGAGAAAAGGTAAAGGTCTTAGAATAGATTTTGACGCTTCGAAGATTCTCA 1006
||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct 1012 AGGACCAAAGGAGAAAAGGTAAAGGTCTTAGAATAGATTTTGAGGCTTCGACCATTCTCA 1071
Query 1007 AAAGGAATGGGAAATATCTCAATTCTGGTACACAGATTTTGGGACATGTACCTGGAGTTG 1066
|||||||||| |||| |||||| |||||| || ||||||||| | || ||||| ||||
Sbjct 1072 AAAGGAATGGCAAATTTCTCAACTCTGGTGTGCATATTTTGGGAGAAGTGCCTGGGGTTG 1131
Query 1067 AGGTTGGTGATGAGTTCCTATATAGGATGGAGCTGAACATTCTTGGTGTACACAGACCAA 1126
|||||||||||||||||| |||||||||||||||||||||||||||| |||| | |||||
Sbjct 1132 AGGTTGGTGATGAGTTCCAATATAGGATGGAGCTGAACATTCTTGGTATACATAAACCAA 1191
Query 1127 GCCAAGCCGGTATCGATTATATGAAATATGGTAAGGGCATAGTTGCGACAAGTATTGTAG 1186
|||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 1192 GCCAGGCCGGTATCGATTATATGAAATATGGTAAGGCCAAAGTTGCGACAAGTATTGTAG 1251
Query 1187 CCTCTGGAGGGTATGACGACCATCTGGATAACTCGGATGTCTTGACCTACACTGGTCAAG 1246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1252 CCTCTGGAGGGTATGACGACCATCTGGATAACTCGGATGTCTTGACCTACACTGGTCAAG 1311
Query 1247 GCGGAAATGTGATGCAAGTAAAGAAGAAGGGCA-AGGAACTGAAAGAGCCCGAAGACCAA 1305
||||||| ||||||||||||||||||||||| | |||||||||||||||| |||||||||
Sbjct 1312 GCGGAAACGTGATGCAAGTAAAGAAGAAGGG-AGAGGAACTGAAAGAGCCTGAAGACCAA 1370
Query 1306 AAGCTTAT-ATCAGGAAACCTCGCGTTAGCAACCAGCTTA-AAGAAGAAGACACCTGTGC 1363
|||||||| | | |||||||||||||||||||||||| || || || || || |||||||
Sbjct 1371 AAGCTTATTACC-GGAAACCTCGCGTTAGCAACCAGCATAGAAAAACAA-ACCCCTGTGC 1428
Query 1364 GTGTCATTAGAGGCAAACATAAGTCAACTT-TAAAAACATCATCTGGTGGAAATTATGTC 1422
||||||||||||||||||||||||||||| | | || |||| ||||||||||||||
Sbjct 1429 GTGTCATTAGAGGCAAACATAAGTCAACTCATGATAA-ATCAAAAGGTGGAAATTATGTT 1487
Query 1423 TACGACGGTTTGTATCTTGTG-AAAGATTATTGGCAAGAAGTCGGATCTCACGGGATGTA 1481
|||||||| || ||||||||| ||| | ||||||||| |||||||||||||||| ||| |
Sbjct 1488 TACGACGGATTATATCTTGTGGAAA-AGTATTGGCAACAAGTCGGATCTCACGGTATGAA 1546
Query 1482 TGTCTTCAAGTTTCAACTTAGGCGCATACCTGGACAATCTGAACTTTCATGGATAGAGGT 1541
||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||
Sbjct 1547 TGTCTTCAAGTTTCAACTTAGGCGCATACCTGGACAACCTGAACTTTCTTGGGTAGAGGT 1606
Query 1542 GAAGAAATCTAAGTCAAAATACCGGGAAGGTATATGCAAGCTTGACATCTCAGAAGGGAA 1601
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1607 GAAGAAATCTAAGTCAAAATACCGGGAAGGTCTATGCAAGCTTGACATCTCAGAAGGGAA 1666
Query 1602 AGAGCTGTCACCCATTAGCGCTGTGAATGAAATAGATGACGAGAAACCGCCTTTGTTCAC 1661
||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 1667 AGAGCAGTCACCCATTAGCGCTGTGAACGAAATAGACGACGAGAAACCGCCTTTGTTCAC 1726
Query 1662 CTACACAGTTAAAATGATTTACCCAGATTGGTGCAGACCAGTTCCTCCAAAGTCATGCGG 1721
|||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1727 CTACACTGTTAAACTGATTTACCCAGATTGGTGCAGACCAGTTCCTCCAAAGTCATGCTG 1786
Query 1722 TTGCACCACACGCTGCACAGAAGCC-A-G-GAAG-TGCGCG-T-GTGTGGTGAAAAACGA 1775
||||||||| |||||||| ||||| | | || | || ||| | |||||| ||||||||
Sbjct 1787 TTGCACCACGCGCTGCACCGAAGCTGAAGCGAGGGTGTGCGCTTGTGTGGAGAAAAACGG 1846
Query 1776 CGGAGAGATACCGTACAACTACGATGGAGCCATTGTTGGGGCTAAGCTTTTTATCTATGA 1835
||||||||||||||||||| |||||||||||||||||| || || | | |||||||||
Sbjct 1847 TGGAGAGATACCGTACAACTTCGATGGAGCCATTGTTGGTGCAAAACCTACTATCTATGA 1906
Query 1836 ATGTGGCCCGCTCTGCAAATGCCCTTCTAGTTGCTACCTAAGAGTCACACAGCACGGGAT 1895
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1907 ATGTGGCCCACTCTGCAAATGCCCTTCTAGTTGCTACCTAAGAGTCACACAGCATGGGAT 1966
Query 1896 CAAGTTACCGCTTGAGATCTTCAAAACCAAGTCAAGAGGTTGGGGAGTGAGATCG-CTTA 1954
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 1967 CAAGTTACCGCTTGAGATCTTCAAAACCAAGTCAAGAGGTTGGGGAGTGAGAT-GTCTTA 2025
Query 1955 AATCGATCCCTATTGGTAGTTTCATATGCGAATACGTTGGTGAACTCTTAGATGATAGCG 2014
| ||||||||||||||||| |||||||| ||||||||||||||||| ||||| ||||| |
Sbjct 2026 AGTCGATCCCTATTGGTAGCTTCATATGTGAATACGTTGGTGAACTTTTAGAGGATAGTG 2085
Query 2015 AAGCAGAAAGAAGAATCGGGAACGACGAGTATCTCTTTGATATTGGTAACAGATATGATA 2074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2086 AAGCAGAAAGAAGAATCGGGAACGACGAGTATCTCTTTGATATTGGTAACAGATATGATA 2145
Query 2075 ACTCTTTAGCGCAAGGGATGTCAGAGCTAATGCCAGGGACACAGGCAGGCCGAGCTATGG 2134
|||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct 2146 ACTCTTTAGCTCAAGGGATGTCAGAGCTAATGCTGGGGACACAGGCAGGCCGATCTATGG 2205
Query 2135 CAGAAGGTGATGAGGCGGGTGGATTCACCATTGATGCAGCAAAG-AAGGGGAATATTGGG 2193
|||||||||||||| || |||||||||||||||||||||||| | ||||| ||| |||||
Sbjct 2206 CAGAAGGTGATGAGTCGAGTGGATTCACCATTGATGCAGCAA-GTAAGGGTAATGTTGGG 2264
Query 2194 AGGTTCATAAACCATAGCTGCTCGCCAAATCTGTATGCACAAAACGTATTGTATGATCAT 2253
||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||
Sbjct 2265 AGGTTCATAAACCATAGCTGCTCGCCAAATCTGTACGCCCAAAACGTTTTGTATGATCAT 2324
Query 2254 GAAGACAAGAGAATCCCTCACGTGATGTTCTTTGCACAGGACAATATACCTCCGCTTCAA 2313
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2325 GAAGACTCTAGAATCCCTCACGTGATGTTCTTCGCACAGGACAATATACCTCCGCTTCAA 2384
Query 2314 GAACTCTGTTACGACTACAATTATGCGCTCGATCAGGTACGCGACTCTAAGGGTAATATC 2373
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 2385 GAACTCTGTTACGACTACAATTACGCGCTCGATCAGGTACGTGACTCTAAGGGTAATATC 2444
Query 2374 AAGAAGAAACCTTGCCTTTGTGGTGCTCCCGGATGTAGGCATAGGCTCTATTGA 2427
||| ||||||||||| ||||||||||| ||| |||||||| |||||||||||||
Sbjct 2445 AAGCAGAAACCTTGCTTTTGTGGTGCTGCCGTATGTAGGCGTAGGCTCTATTGA 2498
> AT2G35160.1 | Symbols: SUVH5, SGD9 | SU(VAR)3-9 homolog 5 | chr2:14822824-14826162
FORWARD LENGTH=2798
Length=2798
Score = 562 bits (304), Expect = 6e-159
Identities = 952/1252 (76%), Gaps = 95/1252 (8%)
Strand=Plus/Plus
Query 844 TCAAGCAGTGGTGATGATAGTATTCGGAACAAAGTTAAGGAAACTCTGCGTCTTTTCCAT 903
||||||||||| | |||||| |||| | |||||||||||||| ||||||||||||||
Sbjct 1095 TCAAGCAGTGG-G--GATAGTGCTCGGTATAAAGTTAAGGAAACAATGCGTCTTTTCCAT 1151
Query 904 G--GCGTGTGCAAAAGGATTTTGCAGGAGGATGAAGCAAAGCCTGAGGACCAAAGGAGAA 961
| | | || |||| ||| |||| ||||| ||||||| |||| |||| ||| |||
Sbjct 1152 GAAAC-T-TGTAAAAAAATTATGCAAGAGGAAGAAGCAAGGCCT-AGGA--AAA-GAG-- 1203
Query 962 AAGGT--AAAGGTCTT-AGAA-TAGATTT-TGACGCTTCGAAGATTCTCAAAAGGAATGG 1016
| ||| || | || | || | | ||| || |||||||| |||||||| || || ||
Sbjct 1204 ATGGTGGCAA--T-TTCA-AAGT-GGTTTGCGAGGCTTCGAAAATTCTCAAGAGTAAAGG 1258
Query 1017 GAAATATCTCAATTCTGGTACACAGATT-TTGGGACATGTACCTGGAGTTGAGGTTGGTG 1075
|||| |||| || |||||| |||||| |||| || ||| ||||| ||||||||||| |
Sbjct 1259 GAAAAATCTTTATAGTGGTACTCAGATTATTGGAAC-TGTGCCTGGTGTTGAGGTTGGCG 1317
Query 1076 ATGAGTTCCTATATAGGATGGAGCTGAACATTCTTGGTGTACACAGACCAAG-CCAAGCC 1134
|||| || | |||||| |||||||||||| |||||||| |||| |||||||| | |||
Sbjct 1318 ATGAATTTCAATATAGAATGGAGCTGAACCTTCTTGGTATACATAGACCAAGTCAAAG-T 1376
Query 1135 GGTATCGATTATATG-AA-AT-ATGGTAAGGGCA-TAGTTGCGACAAGTATTGTAGCCTC 1190
|||||||| |||||| || || | ||| ||| | ||||||| || ||||||||| ||||
Sbjct 1377 GGTATCGACTATATGAAAGATGACGGT-GGGGAACTAGTTGCCACGAGTATTGTATCCTC 1435
Query 1191 TGGAGGGTATGACGACCAT-CTGGATAACTCGGATGTCTTGACCTACACTGGTCAAGGCG 1249
||||| ||| | || | | || |||||||| |||||||||| |||||| ||||||||||
Sbjct 1436 GGGAGGTTATAATGA-CGTGCTTGATAACTCTGATGTCTTGATCTACACGGGTCAAGGCG 1494
Query 1250 GAAATGTGATGCAAGTAAAGAAGAAGGGCAAGGAACTGAAAGAGCCCGAAGACCAAAAGC 1309
|||||||| | | ||| ||||| || || |||| | ||| ||||||| |||
Sbjct 1495 GAAATGTG--G---GGAAA-AAGAA----AAATAA-TGAACCA-CCCAAAGACCAGCAGC 1542
Query 1310 TTATATCAGGAAACCTCGCGTTAG-CAACCAGCT-TAAAGAAGAAG-ACACCTGTGCGTG 1366
|| || | |||||||| ||||| | || ||| | |||| || ||| || |||||||| |
Sbjct 1543 TTGTAACGGGAAACCTTGCGTT-GAAAAACAG-TATAAACAAAAAGAAC-CCTGTGCGGG 1599
Query 1367 TCATTAGAGGCAAACATAAGT-CAACTTTAAAAACATCA-TCTGGTG--GA-AATTATGT 1421
|||| |||||| | || || | | || ||| || ||||| | || || | ||||||||
Sbjct 1600 TCATAAGAGGC-ATCAAAAATACGACATTACAATCATCAGT-TGTTGCAAAGAATTATGT 1657
Query 1422 CTACGACGGTTTGTATCTTGTGAAAGATTATTGGCAAGAAGTCGGATCTCACGGGATGTA 1481
||||| || |||||||| ||| |||| || ||| ||||| ||| |||||| || | |
Sbjct 1658 TTACGATGGATTGTATCTGGTGGAAGAGTACTGGGAAGAAACCGGGTCTCAC-GG-TAAA 1715
Query 1482 -T-GTCTTCAAGTTTC-AACTTA-GGCGCATACCTGGACAATCTGAACTTTCATGGATAG 1537
| ||||||||| ||| ||| || |||| || ||||||||| | || ||| | |||| ||
Sbjct 1716 CTCGTCTTCAAG-TTCAAAC-TACGGCGTATTCCTGGACAACCCGAGCTTCCCTGGAAAG 1773
Query 1538 AGG-TGAAGAAATC---TAAGTCAAAATACCGGGAAGGTATATGCAA-GCTTGACATCTC 1592
||| || |||||| || || | | |||||| ||| | ||||| | |||| ||| |
Sbjct 1774 AGGTTG-CGAAATCGAAAAAATCTGAGTTCCGGGATGGTCTTTGCAATG-TTGATATCAC 1831
Query 1593 AGAAGGGAAAGAG-CTGTCACCCATTA-GCGCTGTGAATGAA-ATAGATGACGAGAAACC 1649
||||||||||||| | | ||||| || |||||||||| || |||| || ||||||||
Sbjct 1832 AGAAGGGAAAGAGAC-ATTACCCA-TATGCGCTGTGAA-CAATTTAGACGATGAGAAACC 1888
Query 1650 GCCTTTGTTCACCTACACAGTTAAAATGATTTACCCAGATTGGTGCAGACCAGTTCCTCC 1709
||| ||| | |||||| | ||||||||| || || ||||||||| | ||| |||||||
Sbjct 1889 GCCACCGTTTATCTACACGGCTAAAATGATATATCCGGATTGGTGCCGGCCAATTCCTCC 1948
Query 1710 AAAG-TCATGCGGTTGCACCACAC-GCTGCACAGAAG-CCAGGAAGTGCGCGTGTGTGGT 1766
|||| | |||||||||| || || ||||| | ||| | | || || || || | ||
Sbjct 1949 AAAGAGC-TGCGGTTGCA-CAAACGGCTGCTC-CAAGTCAAAAAACTGTGCCTGCATTGT 2005
Query 1767 GAAAAACGACGGAGAGATACCGTACAACTACGATGGAGCCATTGTTGGGGCTAAGCTTTT 1826
|||||||| ||| ||||||| | | ||||||||||||||||||| ||||| |
Sbjct 2006 GAAAAACGGTGGAAAGATACC-T--TATTACGATGGAGCCATTGTTGAAATTAAGCCCCT 2062
Query 1827 TATCTATGAATGTGGCCCGCTCTGCAAATGCCCTTCTAGTTGCTACCTAAGAGTCACACA 1886
||||||| |||||||| | |||||||||||| || |||| || | |||||| ||||
Sbjct 2063 GGTCTATGAGTGTGGCCCACACTGCAAATGCCCACCTTCTTGCAACATGAGAGTCTCACA 2122
Query 1887 GCACGGGATCAAG-TTACCGCTTGAGATCTTCAAAACCAAGTCAAGAGGTTGGGGAGTGA 1945
||||||||||||| | | ||| |||||||||||||| |||||||||||||||||||||
Sbjct 2123 GCACGGGATCAAGATCA-AGCTGGAGATCTTCAAAACGGAGTCAAGAGGTTGGGGAGTGA 2181
Query 1946 GATCGCTTAAATCGATCCCTATTGGTAGTTTCATATGCGAATACGTTGGTGAACT-CTTA 2004
||||||| |||| || ||||| || || ||||| || || |||| || || || || |
Sbjct 2182 GATCGCTGGAATCTATTCCTATCGGGAGCTTCATCTGTGAGTACGCAGGAGAGCTTCT-A 2240
Query 2005 GATGATAG-CGAAGCAGAAAGAAGAATCGGGAACGACGAGTATCTCTTTGAT 2055
|| |||| | |||| ||||| | |||||| || |||||||| ||||||
Sbjct 2241 GAGGATAAAC-AAGCTGAAAGCCTTACCGGGAAAGATGAGTATCTTTTTGAT 2291
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 120531508545
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5