BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg899732 Length=492 Score E Sequences producing significant alignments: (Bits) Value AT3G60250.1 | Symbols: CKB3 | casein kinase II beta chain 3 | ... 333 9e-91 > AT3G60250.1 | Symbols: CKB3 | casein kinase II beta chain 3 | chr3:22270337-22272113 REVERSE LENGTH=1359 Length=1359 Score = 333 bits (180), Expect = 9e-91 Identities = 192/198 (97%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 289 GTGGAATCGGAAACTGATAGTGAAGGGTCAGATGTGAGTGGATCGGAGGGTGATGATACA 348 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 356 GTGGAATCGGAAACTGATAGTGAAGGGTCTGATGTGAGTGGATCGGAGGGTGATGATACG 415 Query 349 TCGTGGATCTCTTGGTTTTGTAATTTGAGAGGGAATGATTTCTTTTGTGAAGTCGATGAA 408 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 416 TCGTGGATCTCTTGGTTTTGTAATTTGAGAGGGAATGATTTCTTCTGTGAAGTCGATGAA 475 Query 409 GATTATATTCAAGATGATTTCAATCTTTGTGGATTAAGTGGTCAAGTTCCTGACTATGAT 468 |||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||| Sbjct 476 GATTATATTCAAGATGATTTCAATCTTTGTGGTTTAAGTGGTCAAGTCCCTTACTATGAT 535 Query 469 TATGCACTTGATCTCATT 486 |||||||||||||||||| Sbjct 536 TATGCACTTGATCTCATT 553 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 23459346649 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5