BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg899775 Length=411 Score E Sequences producing significant alignments: (Bits) Value AT2G24290.1 | Symbols: | Protein of unknown function (DUF1068)... 634 0.0 > AT2G24290.1 | Symbols: | Protein of unknown function (DUF1068) | chr2:10338679-10340121 FORWARD LENGTH=884 Length=884 Score = 634 bits (343), Expect = 0.0 Identities = 383/402 (95%), Gaps = 3/402 (1%) Strand=Plus/Plus Query 10 AGCAGCAACTTCATTTGTCCTCCTTGCGAGATCTGCGATTGTCCTCCTCCTTTGTCTCTC 69 |||| ||||| |||||||||||||| | | ||||||||| ||||||||||||||||||| Sbjct 224 AGCACCAACTCCATTTGTCCTCCTT--GTG-TCTGCGATTTTCCTCCTCCTTTGTCTCTC 280 Query 70 CTCCAGATTGCTCCCGGGCTTGCAAACCTCTCTATTACAGGTTGTGGAAGCAATGATCCA 129 ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct 281 CTCCAGATTGCTCCCGGGCTTGCAAACCTCTCTATTACAGGTTGTGGCAGCGATGATCCA 340 Query 130 GAGCTCAAAGAGGAGATGGAGAAGCAGTTTGTTGATCTTCTCACAGAAGAGCTGAAGCTT 189 ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct 341 GAGCTCAAAGAGGAGATGGAGAAGCCGTTTGTGGATCTTCTCACAGAAGAGCTGAAGCTT 400 Query 190 CAAGAAGCAGTTGCAGACGAGCATAGTCATCACATGAATGTTACACTTGCCGAAGCTAAA 249 ||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct 401 CAAGAAGCAGTGGCAGACGAGCATAGTCGTCATATGAATGTTACACTTGCCGAAGCTAAA 460 Query 250 AGGGTTGCTTCACAGTACCAAAAGGAGGCTGAGAAGTGTAACGCTGCCACGGAAATTTGT 309 || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 461 AGAGTTGCTTCACAGTACCAAAAGGAGGCTGAGAAGTGTAACGCTGCCACTGAAATTTGC 520 Query 310 GAATCAGCTAGAGAGAGAGCTCAAGCATTGTTGCTCAAAGAGCGGAAGATCACTTTTTTG 369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 521 GAATCAGCTAGAGAGAGAGCTCAAGCATTGTTGCTCAAAGAGCGGAAGATCACTTTTTTG 580 Query 370 TGGGAACGCATAGCTCGGCAATTAGGTTGGGAAGGTGAGTAA 411 ||||| |||| ||||||||||||||||||||||||||||||| Sbjct 581 TGGGAGCGCAGAGCTCGGCAATTAGGTTGGGAAGGTGAGTAA 622 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 19453618863 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5