BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg899807
Length=1125
Score E
Sequences producing significant alignments: (Bits) Value
AT2G24510.1 | Symbols: | F-box associated ubiquitination effec... 977 0.0
AT3G17540.1 | Symbols: | F-box and associated interaction doma... 841 0.0
AT3G17530.1 | Symbols: | F-box and associated interaction doma... 647 0.0
AT2G13130.1 | Symbols: | pseudogene, F-box protein family, con... 366 2e-100
AT3G17265.1 | Symbols: | F-box and associated interaction doma... 134 2e-30
> AT2G24510.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr2:10404373-10405650 FORWARD LENGTH=907
Length=907
Score = 977 bits (529), Expect = 0.0
Identities = 628/675 (93%), Gaps = 10/675 (1%)
Strand=Plus/Plus
Query 297 GGGAAACACTAGCCTTGTGGTTTGGGACTCCAGTACCGGTGAAACCCGGCGGATCAGACC 356
|||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct 84 GGGAAACACTAGACTTGTGGTTTGGGACTCCAGTACCGGTGAAACCCGGTGGATCAAACC 143
Query 357 GAGAACTCGTTATCGGTATGATGATTACTATGCTTTAGGATACGTAAACAGCAAGTCTTC 416
||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct 144 GAGAACTCGTTTTCGGAATGATGATTACTATGGTTTAGGATACGTAAACAGCAAGTCTTC 203
Query 417 TGGCCATAGCTTCAAAATCTTGAGGTCTTGCTATTAT-GAAAACGACCAGAAACAAAGGG 475
||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||
Sbjct 204 TGGCCATAGCTTCAAAATCTTGAGGTCTTGCTATTATAGAAA-CGACCAGAAACAATGGG 262
Query 476 TTGCTGAGTTTGAGATCTATGAGTTAAGCTCTGACT-CTTGGAGGGTTCTTGATTACTTC 534
||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||
Sbjct 263 TTGCTGAGTTTGAGATCTATGAGTTTGGCTCTGA-TACTTGGAGGGTTCTTGATTACTTC 321
Query 535 ACTCGTGACTATGGTGTATTTTGCA-GTGGCAGGTCTTTGAAAGGAAATACTTATTGGGT 593
|||| ||||||||||||||||| || ||||| || | |||||| |||| ||||| |||||
Sbjct 322 ACTCATGACTATGGTGTATTTT-CAAGTGGCGGGCCCTTGAAAAGAAACACTTACTGGGT 380
Query 594 TGCTGGAGATAAAGAAAATGGCCTT-TTCATGTTGTATTTTGATTTCACAACGGAGAGAT 652
||||||||||||||||| ||| | | ||||||||||||||||||||||||| ||||||||
Sbjct 381 TGCTGGAGATAAAGAAA-TGGGCATGTTCATGTTGTATTTTGATTTCACAAGGGAGAGAT 439
Query 653 TTGGGCGTTTTCCTCTTCCGTTTGAA-AGTTTTAATCCTGAAGATACCGCGGCTCTATCA 711
|||||| |||||||||||||||| || |||||||||| ||||||||| || ||||||||
Sbjct 440 TTGGGCATTTTCCTCTTCCGTTT-AAGAGTTTTAATCGTGAAGATACTGCTTCTCTATCA 498
Query 712 GTTGTTAGGGAAGAAAAACTCTCGGTGTTACATCAGAAGATTCTTGATTTTTCAAATGAG 771
||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||
Sbjct 499 GTTGTTAGGGAAGAAAAACTCTCAGTGTTACATCAAAAGATTCTTGAATTTTCAAATGAG 558
Query 772 ATGAAGATATGGTTGACCAATAAGATCGATGAAACCATAGAATTGTCGTGGAGCAACTTC 831
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 559 ATGAAGATATGGTTGACCAATAAGATTGATGAAACCATAGAATTGTCGTGGAGCAACTTC 618
Query 832 GTCTTAACAGTGGATTATGATAAATTTAATTTACCCAGCGTGGTGAATGTGACAAGTTTC 891
||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||
Sbjct 619 GTCTTAACAGTGGATTATGATAAGTTTAATTTACCGAGCGTGGTGAATGTGGCAAGTTTC 678
Query 892 TTGTTGGACGAGGAGAATAAAGTGGCACTGTGTTCTGATATCGACATGGATGATGAATAT 951
|||||||| |||||||||||||||||| ||||||||||||| ||| ||||||||||| ||
Sbjct 679 TTGTTGGATGAGGAGAATAAAGTGGCAGTGTGTTCTGATATTGACGTGGATGATGAAAAT 738
Query 952 AAGACCAGAGTCTAC 966
| |||||||||||||
Sbjct 739 AGGACCAGAGTCTAC 753
> AT3G17540.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:6002783-6003973 FORWARD LENGTH=1191
Length=1191
Score = 841 bits (455), Expect = 0.0
Identities = 819/989 (83%), Gaps = 48/989 (5%)
Strand=Plus/Plus
Query 162 CGATCACCATGGAATTCACAACAACGTTGATCCATCTATCGAGTTTTCTGGAAAACTTAG 221
||||| ||||||||||| ||||| || |||||||||| |||||||| | | ||||||||
Sbjct 213 CGATCTCCATGGAATTCTCAACAGCGGTGATCCATCTCTCGAGTTTACAAGTAAACTTAG 272
Query 222 CAGTCTAAAGGA-CTCAGAAGATTTAAAAATATCTAAAATCTTCCACTGTGAGGGTTTAA 280
|| ||||| || ||||||||||| | |||| | |||||||| |||||||| |||||||
Sbjct 273 CAACCTAAA-GATATCAGAAGATTTGACAATAACCAAAATCTTTCACTGTGACGGTTTAA 331
Query 281 TATTATGCTCTACTAAGGGAAACACTAGCCTTGTGGTTTGGGACTCCA-GTACCGGTGAA 339
|||||||||| ||||||| ||||||||| || || |||||| || ||| |||||||| ||
Sbjct 332 TATTATGCTCCACTAAGGAAAACACTAGACTCGTTGTTTGGAAC-CCATGTACCGGTCAA 390
Query 340 ACCCGGCGGATCAGACCGAG-AACTCGTTATCGGTA-TGATGATTAC-TA-TGCT-TTAG 394
||| || |||||| ||| || || ||||| | ||| |||||||| | || || | || |
Sbjct 391 ACCAGGTGGATCAAACCCAGCAA-ACGTTA-CCGTAGTGATGATT-CGTATTG-TCTT-G 445
Query 395 GATACGTAAACAGCAAGTCTTCTGGCCATAGCTTCAAAATCTTGAGGTCTTGCTATTATG 454
||||||||||||||||||||||| ||| | || |||||||||||||| ||||| ||||
Sbjct 446 GATACGTAAACAGCAAGTCTTCTTACCACAACTACAAAATCTTGAGGTATTGCTTTTATT 505
Query 455 AAAACGACCA-GAAACAAAGGGTT-GCTGAGTTTGAGATCTATGAGTTAAGCTCTGACTC 512
| |||||||| || | | ||| | ||| |||||||||||||| || |||||||| ||
Sbjct 506 ACAACGACCAGGATGC-TTGTGTTAG-TGAATTTGAGATCTATGACTTTAGCTCTGAATC 563
Query 513 TTGGAGGGTTCTTGAT---TACTTCACTCGTGACTATGGTG--TATTTTG-CAGTGGCAG 566
||||||||||||||| |||| ||||||||| |||| | |||| || || |||||
Sbjct 564 ATGGAGGGTTCTTGATGACTACTGCACTCGTGA--ATGGGGCTTATTCTGCCA-TGGCAT 620
Query 567 GTCTTTGAAAGGAAATACTTA-TTGGGTTGCTGGAGATAAAGAAA-ATGGCCTTTTCATG 624
||||||||||||||||||||| || ||||||||||| ||||||| | ||| ||||||||
Sbjct 621 GTCTTTGAAAGGAAATACTTACTT-TGTTGCTGGAGAAAAAGAAACA-GGCTTTTTCATG 678
Query 625 TTGTATTTTGATTTCACA-ACGGAGAGATTTGGGCGTTTTCCTCTTCCGTTTGAAAGTTT 683
|||| |||||||||| | || |||||||||| |||| | |||||||||| | | |||||
Sbjct 679 CTGTACTTTGATTTCA-AGACAGAGAGATTTGAGCGTCTCCCTCTTCCGTATCAGAGTTT 737
Query 684 TAATCCTGAAGATACCGCGGCTCTATCAGTTGTTAGGGAAGAAAAACTCT-CGGTGTTAC 742
| || ||||||||||||| | | ||||| ||||| ||| ||||||||| | |||||||||
Sbjct 738 TGATTCTGAAGATACCGCTGTTTTATCAATTGTTGGGGGAGAAAAACT-TGCGGTGTTAC 796
Query 743 ATCAGAAGATTCTTGAT--TTTTCAAATGAGATGAAGATATGGTTGACCAATAAGATCGA 800
|||| || |||| || |||||||||||||||| ||||||| | ||||||||||| ||
Sbjct 797 ATCAAAATATTC--AATCGTTTTCAAATGAGATGAGGATATGGGTCACCAATAAGATTGA 854
Query 801 TGAAACCATAGAATTGTCGTGGAGCAACTTCGTCTTAACAGTGGATTATGATAAATTTAA 860
||| ||| ||| ||| | |||||||||||| ||||| ||||||||||||||| ||||||
Sbjct 855 TGAGGCCAAAGACTTGACATGGAGCAACTTCTTCTTAGCAGTGGATTATGATATATTTAA 914
Query 861 TTTACCCAGCGTG-GTGAATGTGACAAGTTTCTTGTTGGACGAGGAGAATAAAGTGGCAC 919
||||| || ||| | ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 915 CTTACCAAGTGTGAAT-AATGTGACAAGCTTCTTGTTGGACGAGGAGAATAAAGTGGCAG 973
Query 920 TGTGTTCTGATAT-CGACATGGATGATGAATATAAGACCAGAGTCTACGTTGTTGGAGAG 978
|||||| ||||| | |||| ||||||||| ||||||||||| ||||| |||||||||
Sbjct 974 TGTGTTGTGATAGAC-ACATAGATGATGAAGATAAGACCAGAATCTACATTGTTGGAGTT 1032
Query 979 GATATATATAAACAAGTCTATAAAGACACTACAAAGGCATCTTATATCAATTGGCCACTT 1038
||| | |||||| |||| |||||||| | ||||||| | || || ||||||||||||||
Sbjct 1033 GATCTTTATAAAGAAGTTTATAAAGAGAGGACAAAGGGAGCTCATTTCAATTGGCCACTT 1092
Query 1039 CTCATCAATTATGTTCCAAGTTTGGTGCACATTAAG-AAAAATACACTCAAAAGGCAAAA 1097
||||||| |||| ||||||| ||||| || ||| || |||||||| | |||||| |||||
Sbjct 1093 CTCATCAGTTATCTTCCAAGCTTGGTTCATATTCAGGAAAAATAC-C-CAAAAGACAAAA 1150
Query 1098 GAAAAGGAAATCAAG-GGAGGTTAGTTAA 1125
|||||||||| |||| |||||||||||||
Sbjct 1151 GAAAAGGAAA-CAAGAGGAGGTTAGTTAA 1178
Score = 154 bits (83), Expect = 2e-36
Identities = 107/118 (91%), Gaps = 4/118 (3%)
Strand=Plus/Plus
Query 31 GAATCCGAAATACTCTCTAGGGTTCCGACCAAGTCTCTAGCAAAATTTCGA-ACTACTTG 89
||||| |||||||||||||||||||||||||||||||||||||| || | | ||||| ||
Sbjct 43 GAATCGGAAATACTCTCTAGGGTTCCGACCAAGTCTCTAGCAAAGTTGC-ATACTACATG 101
Query 90 CAAACGATGGTACGCTTTATTCAGAGATCCAA-ACTTCATCAAGAAGAACTTTGGTAA 146
|||||||||||||||||||||||||||||| | | ||| | |||||||||||||||||
Sbjct 102 CAAACGATGGTACGCTTTATTCAGAGATCCGAGA-TTCGTGAAGAAGAACTTTGGTAA 158
> AT3G17530.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:6000860-6002282 FORWARD LENGTH=1423
Length=1423
Score = 647 bits (350), Expect = 0.0
Identities = 784/989 (79%), Gaps = 48/989 (5%)
Strand=Plus/Plus
Query 160 GTCGATCACCATGGAATTCACAACA-ACGTTGATCCATCTATCGAGTTTTCTGGAAAACT 218
||| ||| ||| || ||| |||| | | |||||||| ||| ||| || | || |||||
Sbjct 202 GTCAATCTCCAAGGGATTAACAATAGA-TTTGATCCAAGTATGGAGGTTACAGGTAAACT 260
Query 219 TAGC-AGTCTAAAGGACTCAGAAGATTTAAAAATATCTAAAATCTTCCACTGTGAGGGTT 277
| | || ||||| || ||| ||| | | | || ||| ||||| ||||| || ||||
Sbjct 261 CATCAAG-CTAAATGATTCAAAAGGTGTCGATATTTCTGCTATCTTTCACTGCGACGGTT 319
Query 278 TAATATTATGCTCTACTAAGGGAAA-CACTAGCCTTGTGGTTTGGGACTCC-AGTACCGG 335
| ||||||||| |||| | ||||| |||| | |||||||||||| || || |||||||
Sbjct 320 TGATATTATGCACTAC-GACGGAAAGCACTGGACTTGTGGTTTGGAAC-CCGTGTACCGG 377
Query 336 TGAAACCCGGCGGATCAGACCGAGAACT-CGTTATCGGTATGATGATTA-CTATGCT-TT 392
||||| | | |||| ||| |||| | ||| |||| | |||| || |||||| ||
Sbjct 378 TGAAATTAGATGTATCAAACCCAGAA-TATTTTACCGGTGTAATGA-TAGGTATGCTCTT 435
Query 393 AGGATACGTAAACAGCAAGTCTTCTGGCCATAGCTTCAAAATCTTGAGGTCTTGCTATTA 452
|| |||| ||||||||| |||||| ||||||||| |||||||||||||||||||| |||
Sbjct 436 -GGTTACGGAAACAGCAAATCTTCTTGCCATAGCTACAAAATCTTGAGGTCTTGCTGTTA 494
Query 453 TGAAAACGACCAGAA----A--CAAAGGGTTGCTGAGTTTGAGATCTATGAGTTAAGCTC 506
| | ||||||||| | | | || ||||||||||||||||||||| || ||| |
Sbjct 495 TTACGTCGACCAGAACCTCAGCCTCATGGCTGCTGAGTTTGAGATCTATGACTTTAGCAC 554
Query 507 TGACTCTTGGAGGGTTCTTGATTACTTCACTCGTGACTATGGT-GTATTTTGCAGTGGCA 565
||| |||||||| | ||||| | || ||||||||||| ||| | |||| || |||||||
Sbjct 555 TGATTCTTGGAGAGATCTTGGTGACATCACTCGTGAC-ATGATCGTATATTCCAGTGGC- 612
Query 566 G-GTCTTTGAAAGGAAATACTTATTGGGTTGCTGGAGATAAAGAAAATGGCCTTTTCATG 624
| ||||||||||||||||||||| |||||| ||||| ||||||||| || ||||||||
Sbjct 613 GTGTCTTTGAAAGGAAATACTTACTGGGTTTCTGGATCTAAAGAAAAAGGTTTTTTCATG 672
Query 625 TTGTATTTTGATTTCA-CAACGGAGAG-ATTTGGGCGTTTTCCTCTTCCGTTTGAAAGTT 682
|||||||||||| | ||| ||| | |||||||||| | |||||||| | | | ||||
Sbjct 673 CGGTATTTTGATTTTAGCAA-AGAG-GTATTTGGGCGTCTCCCTCTTCCATATCAGAGTT 730
Query 683 TTAATCCTGAA-GATACCGCGGCTCTATCAGTTGTTAGGGAA-GAAAAACTCTCGGTGTT 740
||||| || || |||||||||||||||||| |||| ||||| |||||| || | |||||
Sbjct 731 TTAATGCT-AACCATACCGCGGCTCTATCAGCTGTT-GGGAACGAAAAAATCGCCGTGTT 788
Query 741 ACATCAGAAGATTCTTG-ATTTTTCAAATGAGATGAAGATATGGTTGACCAATAAGATCG 799
|| || || ||||||| | | ||| ||||||||| ||| ||| | ||||||||||| |
Sbjct 789 GCAACAAAAAATTCTTGCA-ATGTCAGATGAGATGAGGATTTGGGTCACCAATAAGATTG 847
Query 800 ATGAAACCATAGAATTGTCGTGGAGCAAC-TTCGTCTTAACAGTGGATTATGATAAATTT 858
|||| ||| ||| ||||||||||||||| ||| |||||||||||||||||| |||||||
Sbjct 848 ATGAGGCCAAAGACTTGTCGTGGAGCAACTTTC-TCTTAACAGTGGATTATGGTAAATTT 906
Query 859 AATTTACCCA-G-CGTGGTGAATGTGACAAGTTTCTTGTTGGACGAGGAGAATAAAGTGG 916
|||||| ||| | | | |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 907 AATTTA-CCATGTC-TAGTGAATGTGACAAGCTTCTTGTTGGACGAGGAGAATAAAGTGG 964
Query 917 CACTGTGTTCTGATATCGACATGGATGATGAA-TATAAGACCAGAGTCTACGTTGTTGGA 975
|| |||||||||| | |||| | | |||| | | || || |||| ||||| |||| |||
Sbjct 965 CAGTGTGTTCTGACGTAGACACGAAAGATGGACT-TAGGAGCAGAATCTACATTGTGGGA 1023
Query 976 GAGGATATATATAAACAAGTCTATAAAGACACTACAAAGGCATCTTATATCAATTGGCCA 1035
||||| | |||||| |||| | |||||| ||||| || ||| ||| ||||||||||
Sbjct 1024 AAGGATTTCTATAAAGAAGTTTTTAAAGA---TACAAGGGGATCAGATAACAATTGGCCA 1080
Query 1036 CTTCTCATCAATTATGTTCCAAGTTTGGTGCA-CATTAAGAAAAATACACTCAA-AAGGC 1093
|||||| || ||||||||| |||||||| | |||| || |||||| || ||| |||||
Sbjct 1081 CTTCTCCTCTGTTATGTTCCTAGTTTGGTT-AGCATTCAGGAAAATATACCCAACAAGGC 1139
Query 1094 AAAAGAAAAGGAAATCAAGGGAGGTTAGT 1122
| ||||||| |||||||| ||||||||||
Sbjct 1140 AGAAGAAAATGAAATCAAAGGAGGTTAGT 1168
> AT2G13130.1 | Symbols: | pseudogene, F-box protein family, contains
Pfam PF00646: F-box domain; similar to F-box protein
family, AtFBX9 (GI:20197985) (Arabidopsis thaliana) | chr2:5419675-5420834
REVERSE LENGTH=1160
Length=1160
Score = 366 bits (198), Expect = 2e-100
Identities = 449/569 (79%), Gaps = 22/569 (4%)
Strand=Plus/Plus
Query 567 GTCTTTGAAAGGAAATACTTATTGGGTTGCTGGAGATAAAGAAAATGGCCTTTTCATGTT 626
|||||| || || |||||||| ||| ||| |||||| ||||||| ||| ||||| || |
Sbjct 554 GTCTTTCAATGGTAATACTTACTGGATTGGTGGAGAGAAAGAAACTGGTTTTTTCTTGAT 613
Query 627 GTATTTTGATTTCACAACGGAGAGATTTGGGCGTTTTCCTCTTCCGTTTGAAAGTTTTAA 686
| |||||||||||||||| ||||| |||||||||||||||||||||| | | |||| | |
Sbjct 614 GGATTTTGATTTCACAACAGAGAGGTTTGGGCGTTTTCCTCTTCCGTATCAGAGTTATGA 673
Query 687 TCCTGAAGATACCGCGGCTCTATCAGTTGTTAGGGAAGAAAAACTCTCGGTG-TTACATC 745
| |||||||| ||||| |||||| || |||| ||||||||||||||| || | | |||
Sbjct 674 TTATGAAGATATCGCGGTTCTATCGGTAGTTAAGGAAGAAAAACTCTCCTTGATGA-ATC 732
Query 746 AGAAGATTC-T-T-GATTTTTCAAATGAGATGAAGATATGGTTGACCAATAAGATCGATG 802
|||| |||| | | ||| ||| | ||||||||||||||| |||| |||||| | ||||
Sbjct 733 AGAATATTCATATAAATTCTTC--A-GAGATGAAGATATGGGTGACTAATAAGTTTGATG 789
Query 803 AAACCATAGAATTGTCGTGGAGCAACTTCGTCTTAACAGTGGATTATGATAAATTTAATT 862
|| ||| | | ||||| |||||| | | ||||| |||||||| ||||||||||| |
Sbjct 790 AAGCCAAATACTTGTCATGGAGCCA-GT--TCTTAGTAGTGGATTTTGATAAATTTACGT 846
Query 863 TACCCAGCGTGGTGAATGTGACAAGTTTCTTGTTGGACGAGGAGAATAAAGTGGCACTGT 922
|||| | || | |||| || |||||||||||||||||||||||||||||||||||
Sbjct 847 TACCAAATTTGAACAGCGTGATAACTTTCTTGTTGGACGAGGAGAATAAAGTGGCACTGT 906
Query 923 GTTCTGATATC-GACATGGATGATGAATATAAGACCAGAGTCTACGTTGTTGGAGAGGAT 981
||| ||||| | |||||||| |||||| | | ||||| | |||| ||||||||| ||||
Sbjct 907 GTTGTGATA-CAGACATGGAAGATGAAGAGAGGACCAAAATCTATATTGTTGGAGTGGAT 965
Query 982 ATATATAAACAAGTCTATAAAGACACTACAAAGGCATC--TTATATCAATTGGCCAC-TT 1038
| | ||||||||||| |||||| |||||||| ||| || | | ||||||||| ||
Sbjct 966 CTTTGTAAACAAGTCTTTAAAGAGGTTACAAAGGGATCAGTTCT-T-AATTGGCCATGTT 1023
Query 1039 CTCATCAATTATGTTCCAAGTTTGGTGCACATTAAGAAAAATACACTCAAAAGGCAAAA- 1097
|| ||| ||||| ||||| |||||| |||||| ||||| | || | |||| | ||||
Sbjct 1024 -TCGTCAGTTATGCTCCAAATTTGGTTCACATTCAGAAAGACACTCCCAAA-GTTAAAAA 1081
Query 1098 GAAAAGGAAATCAAGGGAGGTTAGT-TAA 1125
|||| || | ||| |||||| ||| |||
Sbjct 1082 GAAATTGAGAGCAAAGGAGGTAAGTCTAA 1110
> AT3G17265.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:5899515-5900637 REVERSE LENGTH=1038
Length=1038
Score = 134 bits (72), Expect = 2e-30
Identities = 122/145 (84%), Gaps = 8/145 (6%)
Strand=Plus/Plus
Query 14 ATCTTCCGTATGATTTGGAATCCGAAATACTCTCTAGGGTTCC-GACCA-AGTCTCTAGC 71
||||||| |||||| ||||| |||||||||||||||||||| | ||| | | ||||
Sbjct 14 ATCTTCCACCTGATTTAGAATCGGAAATACTCTCTAGGGTTCCTG-CCACA-TTTCTA-A 70
Query 72 AA-AATTTCGAACTACTTGCAAACGATGGTACGCTTTATTCAGAGATCCAA-ACTTCATC 129
|| |||| | |||||||||||||||||||||||||||||| |||||||| | | ||| ||
Sbjct 71 AAGAATTGCAAACTACTTGCAAACGATGGTACGCTTTATTTAGAGATCCGATA-TTCGTC 129
Query 130 AAGAAGAACTTTGGTAACGCACCAA 154
||||||||||| ||||| ||| |||
Sbjct 130 AAGAAGAACTTGGGTAAAGCAGCAA 154
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55170398955
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5