BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg899831 Length=1455 Score E Sequences producing significant alignments: (Bits) Value AT2G24617.1 | Symbols: | unknown protein; Has 35333 Blast hits... 394 1e-108 > AT2G24617.1 | Symbols: | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr2:10462910-10463224 FORWARD LENGTH=315 Length=315 Score = 394 bits (213), Expect = 1e-108 Identities = 268/293 (91%), Gaps = 9/293 (3%) Strand=Plus/Minus Query 1 ATGTGGAAACGA-T--TGGATAGTCTTTTACCACGTGATACATGCGGTTTATACAATAG- 56 ||||| |||||| | |||| || ||||||||| |||||||||||||| ||||||| | Sbjct 289 ATGTGTAAACGACTAAGGGATCGTGTTTTACCACATGATACATGCGGTTCATACAAT-GT 231 Query 57 ATGTGGAGCTTATGGTCTGTGTGACACAAACACATCACCAAACTGTGTTTGCATCCATGG 116 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| Sbjct 230 ATGTGGAGCTTATGGTCTGTGTGACATGGACACATCACCAAACTGTGTTTGCA--CATGG 173 Query 117 GTTTCAGCCGAGAGA-CAAAGAAGCATGGGATTTGCACGACTGGACAGGTGGTTGTACGA 175 |||| || ||||||| | |||||||||||||||| ||||||||||||||||||||||||| Sbjct 172 GTTTGAGGCGAGAGATC-AAGAAGCATGGGATTTCCACGACTGGACAGGTGGTTGTACGA 114 Query 176 GGAAGACACCGTTGAACTGCTCTAGGGATGGGTTTGAGCAGCTCAGGACAATGAAGTTGC 235 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 113 GGAAGACACCGTTGAACTGCTCTACAGATGGGTTTGAGCAGCTCAGGACAATGAAGTTGC 54 Query 236 CTGATATTACAAAGTCTATTGTGGACAGGAGTATTGGGTTGAAGGAATGCCAT 288 | ||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 53 CAGATATTACAAAGTCTATTGTGGACAGGAGTATTGGGTTGGAGGAATGCCAT 1 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 71736578805 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5