BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg899936 Length=666 Score E Sequences producing significant alignments: (Bits) Value AT3G07220.1 | Symbols: | SMAD/FHA domain-containing protein |... 898 0.0 AT3G07260.1 | Symbols: | SMAD/FHA domain-containing protein |... 821 0.0 > AT3G07220.1 | Symbols: | SMAD/FHA domain-containing protein | chr3:2297886-2299572 FORWARD LENGTH=1210 Length=1210 Score = 898 bits (486), Expect = 0.0 Identities = 594/645 (92%), Gaps = 12/645 (2%) Strand=Plus/Plus Query 1 ATGGCTACGGCTGTTGGAGGCGGAAGCGATGTGGAGGTTGGATTTGCGAAGCTTCAAGGT 60 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 83 ATGGCTACGGCTGTTGGTGGCGGAAGCGATGTGGAGGTTGGATTTGCGAAGCTTCAAGGT 142 Query 61 GAGGATTTCGAATACTATATGCAGTCTTACTCCATTATACTCGGTCGGAATTCTAAGAAA 120 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 143 GAGGATTTCGAGTACTATATGCAGTCTTACTCCATTATACTCGGCCGGAATTCTAAGAAA 202 Query 121 GCGACCGTCGACGTTGATCTCTCATCTCTCGGCGGCGGGATGAACATTTCGCGTAACCAC 180 || ||||||||||||||||||||||| |||||||| ||||||||||| ||||| |||||| Sbjct 203 GCCACCGTCGACGTTGATCTCTCATCCCTCGGCGGTGGGATGAACATCTCGCGCAACCAC 262 Query 181 GCTCGGATCTTCTATGACTTCACTAGACGACGCTTCTCTCTCGAGGTCCTTGGCAAAAAT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 263 GCTCGGATCTTCTATGACTTCACTAGACGACGCTTCTCTCTCGAGGTCCTTGGCAAAAAT 322 Query 241 GGCTGCTTCGTTGAAGGTGTCCTCCATCTCCCTGGGAATCCTAACGTCAAGCTCGATTCA 300 |||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct 323 GGCTGCCTCGTTGAAGGTGTTCTTCATCTCCCTGGGAATCCTAACGTCAAGCTCGATTCA 382 Query 301 CAAGACCTTTTGCAGATTGGTGACAAAGAGTTTTACTTCCTGCTTCCGGTTCGGAGTATC 360 ||||||||||||||||| || ||||||||||| ||||| || || ||||||||||| ||| Sbjct 383 CAAGACCTTTTGCAGATCGGAGACAAAGAGTTCTACTTTCTCCTACCGGTTCGGAGCATC 442 Query 361 CTAGACGGGCCATTGGGACCCAGGCACCACGTCTCAGGGCAGACTAGTGTTGTTCCGTAC 420 ||| |||||| |||||||| |||||||||||||| ||||| || ||||||||||| ||| Sbjct 443 TTAGGCGGGCCGTTGGGACCTAGGCACCACGTCTCTGGGCAAACAAGTGTTGTTCCATAC 502 Query 421 CACAACTATCATTCGGGTCCAGGTTCCGGGTCGGGTAAGAAGGCCGTCCGGAGTAGAGAG 480 || || ||||| |||||||||||||| |||||||||||||||| |||| ||||||||||| Sbjct 503 CATAATTATCAGTCGGGTCCAGGTTCTGGGTCGGGTAAGAAGGGCGTCAGGAGTAGAGAG 562 Query 481 TTGTATGAGTTCGATGTTGAAGATGATGATGACGACGACGATGAGGAGGA---TATCAGG 537 |||||||||| ||||| ||||||||||||||||||||||||||||||||| ||| || Sbjct 563 TTGTATGAGTACGATGATGAAGATGATGATGACGACGACGATGAGGAGGACGATATGAGA 622 Query 538 GGAAGTGAAAAGAAAACAAGGAGAGATGGATATGAAGTAGTATATGCTTCCGGAGAGAAG 597 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 623 GGAAGTGGAAAGAAAACAAGGAGAGATGGACATGAAGTAGTATATGCTTCCGGAGAGAAG 682 Query 598 AAGAGA---------TCAAAGGTAGATCGTCAAGCTGATGATCAA 633 |||||| ||||||||||||||| |||||||||||||| Sbjct 683 AAGAGAGAGGGAAGATCAAAGGTAGATCGTGAAGCTGATGATCAA 727 > AT3G07260.1 | Symbols: | SMAD/FHA domain-containing protein | chr3:2309704-2310788 FORWARD LENGTH=914 Length=914 Score = 821 bits (444), Expect = 0.0 Identities = 580/643 (90%), Gaps = 20/643 (3%) Strand=Plus/Plus Query 1 ATGGCTACGGCTGTTGGAGGCGGAAGCGATGTGGAGGTTGGATTTGCGAAGCTTCAAGGT 60 |||||||| || |||||| |||| |||||||| |||||||||||||||||||| |||||| Sbjct 1 ATGGCTACAGCCGTTGGAAGCGGGAGCGATGTAGAGGTTGGATTTGCGAAGCTCCAAGGT 60 Query 61 GAGGATTTCGAATACTATATGCAGTCTTACTCCATTATACTCGGTCGGAATTCTAAGAAA 120 ||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct 61 GAGGATTTCGAGTACTATATGCAGTCTTACTCCATTATTCTCGGCCGGAATTCTAAGAAA 120 Query 121 GCGACCGTCGACGTTGATCTCTCATCTCTCGGCGGCGGGATGAACATTTCGCGTAACCAC 180 ||||||||||||| || ||||||||||||||||| |||||||||||||| || |||||| Sbjct 121 TCGACCGTCGACGTCGACCTCTCATCTCTCGGCGGTGGGATGAACATTTCTCGCAACCAC 180 Query 181 GCTCGGATCTTCTATGACTTCACTAGACGACGCTTCTCTCTCGAGGTCCTTGGCAAAAAT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 181 GCTCGGATCTTCTATGACTTCACTAGACGACGCTTCTCTCTCGAGGTACTTGGCAAAAAT 240 Query 241 GGCTGCTTCGTTGAAGGTGTCCTCCATCTCCCTGGGAATCCTAACGTCAAGCTCGATTCA 300 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct 241 GGCTGCTTCGTTGAAGGTGTCCTCCATCTCCCTGGGAACCCCAACGTCAAGCTCGATTCA 300 Query 301 CAAGACCTTTTGCAGATTGGTGACAAAGAGTTTTACTTCCTGCTTCCGGTTCGGAGTATC 360 || ||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||| Sbjct 301 CAGGACCTTTTGCAGATTGGTGACAAGGAGTTCTACTTCCTGCTTCCGGTTTGGAGTATC 360 Query 361 CTAGACGGGCCATTGGGACCCAGGCACCACGTCTCAGGGCAGACTAGTGTTGTTCCGTAC 420 |||| ||| ||||||||||||||||||||||||| |||| || ||| ||||||||||||| Sbjct 361 CTAGGCGGTCCATTGGGACCCAGGCACCACGTCTTAGGGAAGGCTACTGTTGTTCCGTAC 420 Query 421 CACAACTATCATTCGGGTCCAGGTTCCGGGTCGGGTAAGAA-GGCCGTCCGGAGTAGAGA 479 || || ||||||||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct 421 CATAATTATCATTCGGGTCCAGGTTCCGGGTCGGGTAAGAATGGC-GTCCGGAGTAGAGA 479 Query 480 GTTGTATGAGTTCGATGTTGAAGATGATGATGACGACGACGATGAGGAGGATATCAGGGG 539 ||||||||||| ||||| | ||| | |||||||| || |||||||||||||| || Sbjct 480 GTTGTATGAGTACGATG---A---TGA--A-GACGACGATGAAGAGGAGGATATCAGAGG 530 Query 540 AAGTGAAAAGAAAACAAGGAGAGATGGATATGAAGTAGTATATGCTTCCGGAGAGAAGAA 599 |||| |||||||||| ||||||||||| |||||| ||||||||| || ||||||||||| Sbjct 531 CAGTGGAAAGAAAACATGGAGAGATGGACATGAAGGAGTATATGCCTCTGGAGAGAAGAA 590 Query 600 GAGA---------TCAAAGGTAGATCGTCAAGCTGATGATCAA 633 |||| ||||||| ||||||| |||||||||||||| Sbjct 591 GAGAGAGGGAAGATCAAAGGCAGATCGTGAAGCTGATGATCAA 633 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 32200088227 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5