BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg900011 Length=888 Score E Sequences producing significant alignments: (Bits) Value AT2G25650.1 | Symbols: | DNA-binding storekeeper protein-relat... 562 2e-159 AT4G00270.1 | Symbols: | DNA-binding storekeeper protein-relat... 387 1e-106 AT5G14280.1 | Symbols: | DNA-binding storekeeper protein-relat... 274 1e-72 > AT2G25650.1 | Symbols: | DNA-binding storekeeper protein-related transcriptional regulator | chr2:10914586-10916216 FORWARD LENGTH=1550 Length=1550 Score = 562 bits (304), Expect = 2e-159 Identities = 421/474 (89%), Gaps = 21/474 (4%) Strand=Plus/Plus Query 421 GCTC-AGAACGAGATTGGGGAGGAGATGTTGAAGGAGCATGAGGAAACCTTGAATGAGAA 479 |||| ||| ||||| | |||||||||||||||||||||||||||| |||| |||||||| Sbjct 869 GCTCGAGAGCGAGAGCGAGGAGGAGATGTTGAAGGAGCATGAGGAACCCTTTAATGAGAA 928 Query 480 TGGTGCAGCGAAAATAACAGACAACAACGGGACTACTCAAATAGTACCGCAGAGCGAGAG 539 |||||||| ||| |||| |||||| ||||||||||||||||||| || |||||||||||| Sbjct 929 TGGTGCAGAGAATATAAGAGACAATAACGGGACTACTCAAATAGCACAGCAGAGCGAGAG 988 Query 540 C--GAG-GAGGAGATGTTGAAGGAGCACGAGGAAGTGCTGGCTAATACTGAACCCT-TAT 595 | ||| |||||||||||||||||||| |||||| | |||||||||||||| | | || Sbjct 989 CGAGAGTGAGGAGATGTTGAAGGAGCATGAGGAA--G-TGGCTAATACTGAA-CTTGTAA 1044 Query 596 ATGAGAATGGGAG-AGCGAAAACAAAAAAGAACGGGACTACTGCTGG-AAAG-GAGA-GT 651 ||||||||||| | ||||||||||| | ||||||||||||||| ||| |||| |||| | Sbjct 1045 ATGAGAATGGG-GCAGCGAAAACAACAGAGAACGGGACTACTGGTGGAAAAGAGAGACAT 1103 Query 652 CCTGACGATGATGATGCATTA-CT-T--GCTGTGCAGGATGCATTTGAGGCTGTAATGTC 707 |||||||||||||| || | | | |||||||||||||||||||||||||||||||| Sbjct 1104 GATGACGATGATGATG-ATGAGTTATGCGCTGTGCAGGATGCATTTGAGGCTGTAATGTC 1162 Query 708 ACAAGGTTTAAGTGATTATCAAAAGAAGTTGCAGCTTGAGAAGCTCATGAACCTTGGAAC 767 ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1163 GCAAGGTTTAAGTGGTTATCAAAAGAAGTTGCAGCTTGAGAAGCTGATGAACCTTGGAAC 1222 Query 768 TGGAAAAAGAAGAGAGTTGAGCGATGAATGGAAAGCGTTATGTGTTGAGGAACGGAA-AT 826 ||||||||||||||||||||| |||||||||||||||||||||||||||||| | || || Sbjct 1223 TGGAAAAAGAAGAGAGTTGAGTGATGAATGGAAAGCGTTATGTGTTGAGGAAAG-AAGAT 1281 Query 827 TGAATATCAAGAAGCTTAGATTTTCTGCCAAGCTTGCAGAGGCTGCAAATTATA 880 ||||||||||||||||||||||||| ||||||||||||||||| || ||| ||| Sbjct 1282 TGAATATCAAGAAGCTTAGATTTTCCGCCAAGCTTGCAGAGGCAGCTAATGATA 1335 Score = 475 bits (257), Expect = 3e-133 Identities = 427/501 (85%), Gaps = 44/501 (9%) Strand=Plus/Plus Query 104 TTGATTACAGAGCTAAGACAGGATTCCAAT-CCAAAATTGATTGGGATGCGTTTTATC-G 161 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| | | Sbjct 424 TTGATTACAGAGCTAAGACAGGATT-CAATCCCAAAATTGATTGGGATGCGTTTTA-CAG 481 Query 162 TTTCCTCGGAAGTTCAATCGTTGCGAAATTCTCCAAGGATCAGGTTTTGAGTAAGATCAG 221 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct 482 TTTCCTCGGAAGTTCTATCGTTGCGAAATTCTCCAAGGAGCAGGTTTTGAGTAAGATCAG 541 Query 222 GAAATTGAAAAGGAGATTTCTTGTTCACTGGGAGAAAATCAATGAAGGGAATGATCCCAA 281 ||| |||||||||||||||| |||||| ||||||||||||| ||||||||||||||| || Sbjct 542 GAAGTTGAAAAGGAGATTTCATGTTCATTGGGAGAAAATCAGTGAAGGGAATGATCCGAA 601 Query 282 GTTTACTAGGTCTAGTGATTCTGAAGCCTTTGGATTTTCTTCAATGATTTGGGGACAAAA 341 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 602 ATTTACTAGGTCTAGTGATTCTGAAGCCTTTGGATTTTCTTCGATGATTTGGGGACAA-- 659 Query 342 TGAAGCTGAATTTGGTAATCATGATGGTATGGATAA--AGA-G---------CACGAGG- 388 | | ||||||||||||| |||||||||||||||| ||| | ||||| | Sbjct 660 -G--G-TGAATTTGGTAATGATGATGGTATGGATAAGGAGATGGTGAAGGAGCACGATGT 715 Query 389 AACCCGTAAATGGGGCAGCGGAAAACGGGACTGCTC-A---G-A-A------CGAGATTG 436 || | | |||||| ||||| ||||| |||||||||| | | | | ||||| || Sbjct 716 AAACGG-AAATGGCGCAGCTGAAAATGGGACTGCTCGAATAGCACAGGAGAACGAGAGTG 774 Query 437 GGGAGGAGATGTTGAAGGAGCATGAGGAAACCTTGAATGAGAATGGTGCAGCGAAAATAA 496 ||||||||||||| ||||||||||||||||| || |||||||||||||||| | | |||| Sbjct 775 GGGAGGAGATGTTAAAGGAGCATGAGGAAACGTTAAATGAGAATGGTGCAGAGGAGATAA 834 Query 497 CAGACAACAACGGGACTACTC--AAAT-A--GTA-C-CGCAGAGCGAGAGCGAGGAGGAG 549 ||||||| ||| |||| ||| ||| | | | | || |||||||||||||||||||| Sbjct 835 GAGACAACGACGAGACTGCTCGGAAAGCACAGCAGCTCG-AGAGCGAGAGCGAGGAGGAG 893 Query 550 ATGTTGAAGGAGCACGAGGAA 570 |||||||||||||| |||||| Sbjct 894 ATGTTGAAGGAGCATGAGGAA 914 > AT4G00270.1 | Symbols: | DNA-binding storekeeper protein-related transcriptional regulator | chr4:117152-118577 REVERSE LENGTH=1343 Length=1343 Score = 387 bits (209), Expect = 1e-106 Identities = 316/363 (87%), Gaps = 25/363 (7%) Strand=Plus/Plus Query 104 TTGATTACAGAGCTAAGACAGGATTCCAAT-CCAAAATTGATTGGGATGCGTTTTATCGT 162 ||||||||||||||||||||||||| |||| |||||||||||||||||||||||| | || Sbjct 351 TTGATTACAGAGCTAAGACAGGATT-CAATCCCAAAATTGATTGGGATGCGTTTTGTAGT 409 Query 163 TTCCTCGGAAGTTCAATCGTTGCGAAATTCTCCAAGGATCAGGTTTTGAGTAAGATCAGG 222 |||||||||||||| ||||||| || ||||||||||||||||||||||||||| |||||| Sbjct 410 TTCCTCGGAAGTTCTATCGTTGAGAGATTCTCCAAGGATCAGGTTTTGAGTAAAATCAGG 469 Query 223 AAATTGAAAAGGAGATTTCTTGTTCACTGGGAGAAAATCAATGAAGGGAATGATCCCAAG 282 || ||||||||||| |||| |||||||| ||||||||||||| |||||||||||||||| Sbjct 470 AAGTTGAAAAGGAGGTTTCATGTTCACTCGGAGAAAATCAATCAAGGGAATGATCCCAAA 529 Query 283 TTTACTAGGTCTAGTGATTCTGAAGCCTTTGGATTTTCTTCAATGATTTGGGGACAAAAT 342 |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 530 TTTACTAGGTCTAGTGATTCTGAAGCCTTTGGGTTTTCTTCGATGATTTGGGGACAA--- 586 Query 343 GAAGCTGAATTTGGTAATCATGATGGTATGGATAAAGAGCACGAGG-AACCCGTAAATGG 401 | | ||| | | | | |||||||||||||| |||||||||| || | | |||||| Sbjct 587 G--G-TGA-T--G--A-T---GATGGTATGGATAAGGAGCACGAGGTAAACGG-AAATGG 633 Query 402 GGCAGCGGAAAACGGGACTGCTCAGAACGAGATTGGGGAGGAGATGTTGAAGGAGCATGA 461 |||||||||||| ||||| | | ||||| ||||||||||||||||||||||| || Sbjct 634 TGCAGCGGAAAACCGGACT----A-A-CGAGAGCGGGGAGGAGATGTTGAAGGAGCACGA 687 Query 462 GGA 464 ||| Sbjct 688 GGA 690 Score = 353 bits (191), Expect = 1e-96 Identities = 312/366 (85%), Gaps = 26/366 (7%) Strand=Plus/Plus Query 534 CGAGAGCGAGGAGGAGATGTTGAAGGAGCACGAGGAAG-TGCTGGCTAATACTGAACCCT 592 |||||||| ||||||||||||||||||||||||||| | | ||||||||||||||| | Sbjct 655 CGAGAGCGGGGAGGAGATGTTGAAGGAGCACGAGGAGGAAG-TGGCTAATACTGAACTTT 713 Query 593 TATATGAGAATGGGAG-AGCGAAAACAAAAAAGAACGGGACTACT-GCTGG-AAAG-GAG 648 || ||||||||||| | ||| ||||||| | |||| ||||||| | | ||| |||| ||| Sbjct 714 TAAATGAGAATGGG-GCAGCCAAAACAACAGAGAATGGGACTAGTAG-TGGAAAAGAGAG 771 Query 649 --A-G-T-----C-CTGACGATGATGATGCA-TTACT-TGCTGTGCAGGATGCATTTGAG 696 | | | | ||| |||||||||| | ||| | || |||||||||||||||||| Sbjct 772 ACATGATGAGGACAATGATGATGATGATG-AGTTA-TGCGCGGTGCAGGATGCATTTGAG 829 Query 697 GCTGTAATGTCACAAGGTTTAAGTGATTATCAAAAGAAGTTGCAGCTTGAGAAGCTCATG 756 || || ||||| ||||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct 830 GCGGTGATGTCGCAAGGTTTAAGTGGTTATCAAAAGAAGTTGCAGCTTGAGAAGCTGATG 889 Query 757 AACCTTGGAACTGGAAAAAGAAGAGAGTTGAGCGATGAATGGAAAGCGTTATGTGTTGAG 816 |||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 890 AACCTTGGAAATGGTAAAAGAAGAGAGTTGAGTGATGAATGGAAAGCGTTATGTGTTGAG 949 Query 817 GAA-CGGAA-ATTGAATATCAAGAAGCTTAGATTTTCTGCCAAGCTTGCAGAGGCTGCAA 874 ||| | || ||| ||||||||||||||||||||||| ||||||||||||||||| || | Sbjct 950 GAAAC--AAGATTCAATATCAAGAAGCTTAGATTTTCCGCCAAGCTTGCAGAGGCAGCTA 1007 Query 875 ATTATA 880 || ||| Sbjct 1008 ATGATA 1013 > AT5G14280.1 | Symbols: | DNA-binding storekeeper protein-related | chr5:4609123-4611444 FORWARD LENGTH=1719 Length=1719 Score = 274 bits (148), Expect = 1e-72 Identities = 226/262 (86%), Gaps = 11/262 (4%) Strand=Plus/Plus Query 622 AAGAACGGGACTACTGCTGGAAAGGAGAGTCCTGACGATGATGATGCA--T-TACT-TGC 677 ||||||||| ||||||||||| |||||| ||| |||||||||| | | | | ||| Sbjct 637 AAGAACGGG---ACTGCTGGAAAAGAGAGTGATGATGATGATGATG-ATGTGTTGTGTGC 692 Query 678 TGTGCAGGATGCATTTGAG---GCTGTAATGTCACAAGGTTTAAGTGATTATCAAAAGAA 734 ||||| |||||| |||||| | | ||||| ||||| |||||||||||||||||||| Sbjct 693 TGTGCGGGATGCGTTTGAGACCACCATGATGTCGCAAGGATTAAGTGATTATCAAAAGAA 752 Query 735 GTTGCAGCTTGAGAAGCTCATGAACCTTGGAACTGGAAAAAGAAGAGAGTTGAGCGATGA 794 |||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||| Sbjct 753 GTTGCAGCTTGAGAAGCTGATGAACCTTGGAACTGGTAAAAGAAGAGAGTTGAGCAATGA 812 Query 795 ATGGAAAGCGTTATGTGTTGAGGAACGGAAATTGAATATCAAGAAGCTTAGATTTTCTGC 854 ||||||||| ||||||||||||||| |||||||||||||| |||||| ||||||| || Sbjct 813 ATGGAAAGCACTATGTGTTGAGGAACTAAAATTGAATATCAACAAGCTTCGATTTTCCGC 872 Query 855 CAAGCTTGCAGAGGCTGCAAAT 876 ||||||||||||||| |||||| Sbjct 873 CAAGCTTGCAGAGGCAGCAAAT 894 Score = 167 bits (90), Expect = 2e-40 Identities = 199/249 (80%), Gaps = 18/249 (7%) Strand=Plus/Plus Query 113 GAGCTAAGACAGGATTCCAATCCAAAATTGATTGGGATGCGTTTTATCGTTTCCTCGGAA 172 ||||||| |||||| || ||||||||||||||||||||||||||||| ||| | || || Sbjct 242 GAGCTAAAACAGGACTCGAATCCAAAATTGATTGGGATGCGTTTTATTGTTACGTCA-AA 300 Query 173 G-TTCAAT-CGTTGCGAAA-TTCTCCAAG-GATCAGGTTTTGAGTAAGATCAGGAAATTG 228 | ||| || | | | |||| || |||||| | ||| || ||||||||| |||||| ||| Sbjct 301 GGTTCCATTCAT-GTGAAAGTT-TCCAAGTGC-CAGCTTATGAGTAAGACCAGGAAGTTG 357 Query 229 AA-AAGGAGATTTCTTGTTCAC-TGGGAGAAAATCAATGAAGGGAATGATCC-CAAGTTT 285 || ||| || || |||| ||| ||| |||||||| || |||| |||||||| || ||| Sbjct 358 AAGAAGAAG-TTCCTTGATCAAATGG-AGAAAATCGATCAAGGAAATGATCCACAT-TTT 414 Query 286 ACTAGGTCTAGTGATTCTGAAGCCTTTGGATTTTCT-TCAATGATTTGGGGACAAAAT-G 343 |||||||||||||| ||||||| ||||||| ||| | | |||||||| | ||||| | Sbjct 415 ACTAGGTCTAGTGAAACTGAAGCTTTTGGATATTCCATGA-TGATTTGGCGT-AAAATTG 472 Query 344 AAGCTGAAT 352 | ||||||| Sbjct 473 ATGCTGAAT 481 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 43352068861 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5