BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg900440

Length=225
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G58130.1 | Symbols:  | N-acetylglucosaminylphosphatidylinosi...   361    2e-99
  AT2G27340.2 | Symbols:  | N-acetylglucosaminylphosphatidylinosi...   355    9e-98


> AT3G58130.1 | Symbols:  | N-acetylglucosaminylphosphatidylinositol 
de-N-acetylase family protein | chr3:21527640-21529905 
FORWARD LENGTH=1331
Length=1331

 Score =  361 bits (195),  Expect = 2e-99
 Identities = 215/225 (96%), Gaps = 0/225 (0%)
 Strand=Plus/Plus

Query  1     GTAAGCCTTAATATCTTCCGCAAGTACTGTGGACCTGTCGACATTTGGCTGTCAATTTTA  60
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct  856   GTAAGCCTTAATATCTTTCGCAAGTACTGTGGACCTGTCGACATTTGGCTGTCAATTTTA  915

Query  61    TCCGGCAAAAAACATCCGAGTAAGGTAATCATCATAAACGAACAGCCTTGGAAAAGCTTC  120
             |||| ||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct  916   TCCGCCAAAATACATCCGAGCAAGGTAATCATCATAAACGAGCAGCCTTGGAAAAGCTTC  975

Query  121   AAAGCAATGGCACAACATTTAAGCCAGTGGGTTTGGTTTAGGAAGCTTTTTGTTTTGCTT  180
             ||||||||||||||||||||||||||||||||||||||| | ||||||||||||| | ||
Sbjct  976   AAAGCAATGGCACAACATTTAAGCCAGTGGGTTTGGTTTCGAAAGCTTTTTGTTTCGTTT  1035

Query  181   TCAAGCTATACATATGCGAATACACTTAATAGAATCAACCCTTGA  225
             |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct  1036  TCAAGCTATACATATGCGAATACACTTAGTAGAATCAACCCTTGA  1080


> AT2G27340.2 | Symbols:  | N-acetylglucosaminylphosphatidylinositol 
de-N-acetylase family protein | chr2:11696737-11699224 
FORWARD LENGTH=1456
Length=1456

 Score =  355 bits (192),  Expect = 9e-98
 Identities = 213/223 (96%), Gaps = 2/223 (1%)
 Strand=Plus/Plus

Query  1     GTAAGCCTTAATATCTTCCGCAAGTACTGTGGACCTGTCGACATTTGGCTGTCAATTTTA  60
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct  1110  GTAAGCCTTAATATCTTTCGCAAGTACTGTGGACCTGTCGACATTTGGCTGTCTATTTTA  1169

Query  61    TCCGGCAAAAAACATCCGAGTAAGGTAATCATCATAAACGAA-CAGCCTTGGAAAAGCTT  119
             |||| ||||| |||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct  1170  TCCGCCAAAAGACATCCGAGTAAGGTAATCATCATAAAC-AAGCAGCCTTGGAAAAGCTT  1228

Query  120   CAAAGCAATGGCACAACATTTAAGCCAGTGGGTTTGGTTTAGGAAGCTTTTTGTTTTGCT  179
             |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct  1229  CAAAGCAATGGCACAACATTTAAGCCAGTGGGTTTGGTTTCGGAAGCTTTTTGTTTTGTT  1288

Query  180   TTCAAGCTATACATATGCGAATACACTTAATAGAATCAACCCT  222
             ||||||||||||||||| |||||||||| ||||||||||||||
Sbjct  1289  TTCAAGCTATACATATGTGAATACACTTGATAGAATCAACCCT  1331



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 10103817549


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5