BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg900472 Length=1083 Score E Sequences producing significant alignments: (Bits) Value AT2G28460.1 | Symbols: | Cysteine/Histidine-rich C1 domain fam... 1059 0.0 AT1G45243.1 | Symbols: | Cysteine/Histidine-rich C1 domain fam... 87.9 2e-16 > AT2G28460.1 | Symbols: | Cysteine/Histidine-rich C1 domain family protein | chr2:12166573-12168874 FORWARD LENGTH=2302 Length=2302 Score = 1059 bits (573), Expect = 0.0 Identities = 697/755 (92%), Gaps = 15/755 (2%) Strand=Plus/Plus Query 1 ATGTCTCCCGCGAAATC-TATGAGATTTGATCTTGATTGGGTTGATGAAAAGAGGATGAA 59 ||||||||||| ||| | || |||||||||||||||||||||| ||||||||||||||| Sbjct 131 ATGTCTCCCGC-AAAACAAATAAGATTTGATCTTGATTGGGTTGGTGAAAAGAGGATGAA 189 Query 60 TTCTTTCATTACTAAAGTAATGTCTCTCGTCAGCTTAATGGATTTGGATTTGCAGCCGAA 119 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 190 TTCTTTCATTACTAAAGTAATGTCTCTCGTCAGCTCAATGGATTTGGATTTGCAGCCGAA 249 Query 120 GCCGGAGTCGGAGTTCATGTCACTCACTACTCAAGTAATT-TCTCTACTCCACTCTATCG 178 |||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||| | Sbjct 250 GCCGGAGTCGGAGTTCATGTCACTCACTACTCAAAT-ATTCTCTCTACTCCACTCTATGG 308 Query 179 ATTTAGATTCCATGCCGAAGCCGCTGTCAAATCTCATCTCACTTCTTTCTCAAGGAAACT 238 ||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 309 ATTCGGATTCCATGCCGAAGCCGCTCTCAAATCTCATCTCACTCCTTTCTCAAGGAAACT 368 Query 239 TTGACCATAATACCGACTTCAGGTTATTCTTTCGTCAAACAATAGCACTCGAGCCGGAGC 298 |||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||| Sbjct 369 TTGACCATAATACCGACTTCAGGTTATTCTTTCGTCAAACTATGGCACTCGAGCCAGAGC 428 Query 299 CAATCTTTGTGTCACTCATCTATCAAATATTCTCCCTCGTAATATCTATGAATTTTAAGA 358 |||| ||| |||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct 429 CAATATTTATGTCACTCATCTATCAAATATTCTCCCTAGTAATATCTATGAATACTAAGA 488 Query 359 GGGAGAAGCTTATTTCCTTATGTCCTCAAGCATGCGTAGTATTGGGTAATAAT-GGAATA 417 |||| |||||||||||||||||||||||||||||||| || |||||||||||| ||||| Sbjct 489 GGGATAAGCTTATTTCCTTATGTCCTCAAGCATGCGTGGTTTTGGGTAATAATGGGAAT- 547 Query 418 TTTGATGTGATCGTACGTAAACAAGAAGAAGGGC-AGTTTCATCGGGGTAAAGCAATCCC 476 ||||| |||||||| |||| || ||||||| | || |||| ||| ||||||||||| Sbjct 548 TTTGAAGTGATCGT---TAAAAAACAAGAAGGTCAAG-CTCATAAGGGCAAAGCAATCCC 603 Query 477 GTGGAGTAGAGATAGCAAGTGGGAATGTCTCCCTTTTAACTGGAAGACATACTGGTCTAC 536 |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct 604 GTGGAGTAGAGATAGCAAGTGGGAATGTCTTCCTTTTAACTGGAAGACATATTGGTCTAG 663 Query 537 TGGAGAAGATGTTACTCATTTTCGATGTAGAAATTGCGATGGCGACAACCATAAAGAATA 596 |||||| |||||||| ||||||||||| |||| |||||||||||||||||||||||||| Sbjct 664 TGGAGATGATGTTACACATTTTCGATGCCGAAACTGCGATGGCGACAACCATAAAGAATA 723 Query 597 T-AACAAGGCTCCGGTTGAGATCAAACACTCTCTTCATCGGAAACATTCTCTTCAGCTTG 655 | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 724 TGAA-AAGGCTCCGGTTGAGATCAAACACTCTCTTCATCGGAAACATTCTCTTCAGCTTG 782 Query 656 TCTTGTTGGATGAGAGTAGTTATACGAGGGTATGCTATTGTTGTGATGAAGATCTCAAAA 715 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 783 TCTTGTTGGATGAGAGTAGTTATACGAGGGTATGCTATTGTTGCGATGAAGATCTCAAAA 842 Query 716 AGATGTTCTATTATTGCCACG-CTTGCGATTTTGG 749 |||||| |||||||| | | ||||||||||||| Sbjct 843 GGATGTTTTATTATTGTCG-GACTTGCGATTTTGG 876 Score = 348 bits (188), Expect = 8e-95 Identities = 219/234 (94%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 845 GGGACTTACACATGAGGCCCGGTTCAACGTGGATCACCTTTGGTAACAAGGTAGATGTTC 904 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2007 GGGACTTACACATGAGGCCCGGTTCAACGTGGATCACCTTTGGTAACAAGGTAGATGTTC 2066 Query 905 TACCCAACAATAATCGTATGTCTCGATCTATTTGCTCCTTTTGTGCGAAGCACTGTCCAC 964 ||| ||||| ||| ||||||||||||||||||||||||| ||||| ||| ||||||||| Sbjct 2067 TACACAACAGTAACCGTATGTCTCGATCTATTTGCTCCTATTGTGTGAAACACTGTCCAT 2126 Query 965 ATAAAATAGTTTACATGTGTTCTGGATTGATATTATGTTCCCAAAGTTGTGTAGTGCGTA 1024 |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 2127 ATAAGATAGTTTACATGTGTTCTGGATTGATATTATGTTCCCAAGGTTGTGTAGTGCGTA 2186 Query 1025 GCATATTGCATAAACGCTGG-CGTTACAGAGAGTTAGCTTTTTTGAGTAGGTAT 1077 |||||||||| ||||| ||| |||||||||||||||| ||||||||||| ||| Sbjct 2187 GCATATTGCAGAAACG-TGGACGTTACAGAGAGTTAGAATTTTTGAGTAGATAT 2239 Score = 159 bits (86), Expect = 4e-38 Identities = 94/98 (96%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 748 GGATATGATGGTATTATAAACTATTATAACGATAAATGCTCAGCTTGTATTGGATTGTGC 807 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1553 GGATTTGATGGTGTTATAAACTATTATAACGATAAATGCTCAGCTTGTATTGGACTGTGC 1612 Query 808 AAAGGTGGTTTCTTCTATGAGTGTGGTAAAGAAGGATG 845 |||||||||||||||||||||||||||||| ||||||| Sbjct 1613 AAAGGTGGTTTCTTCTATGAGTGTGGTAAACAAGGATG 1650 > AT1G45243.1 | Symbols: | Cysteine/Histidine-rich C1 domain family protein | chr1:17147058-17147849 FORWARD LENGTH=792 Length=792 Score = 87.9 bits (47), Expect = 2e-16 Identities = 62/69 (90%), Gaps = 2/69 (3%) Strand=Plus/Plus Query 778 GATAAATGCTCAGCTTG-TATTGGATTGTGCAAAGGTGGTTTCTTCTATGAGTGTGGTAA 836 ||||| || |||| ||| | |||| |||||||||| |||||||||||||||||||||||| Sbjct 157 GATAATTGTTCAGTTTGTTCTTGG-TTGTGCAAAGTTGGTTTCTTCTATGAGTGTGGTAA 215 Query 837 AGAAGGATG 845 ||||||||| Sbjct 216 AGAAGGATG 224 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 53061976065 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5