BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg900578 Length=879 Score E Sequences producing significant alignments: (Bits) Value AT2G27670.1 | Symbols: | Domain of unknown function DUF220 | c... 1343 0.0 AT1G23660.1 | Symbols: | Domain of unknown function DUF220 | c... 424 1e-117 AT1G23610.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 291 1e-77 AT1G23600.1 | Symbols: | Domain of unknown function DUF220 | c... 233 2e-60 > AT2G27670.1 | Symbols: | Domain of unknown function DUF220 | chr2:11801568-11802891 REVERSE LENGTH=882 Length=882 Score = 1343 bits (727), Expect = 0.0 Identities = 833/884 (94%), Gaps = 7/884 (1%) Strand=Plus/Plus Query 1 ATGGTTGTATTTACTAGATTTGGTGGCTTGATCAATCAGAGCATTCAACAGCCTCTTAAG 60 |||| || ||||||| |||||||||||||||||||||||| |||||||||||||| |||| Sbjct 1 ATGGGTGGATTTACTGGATTTGGTGGCTTGATCAATCAGAACATTCAACAGCCTCGTAAG 60 Query 61 GCCGCGGCCGAGTCCAAGATACCTGAGAATGTTAAATCTAGTTCAGTTTCAGAGAAAGAT 120 ||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct 61 GCCGCGGCCAAGTCCAAGATACATGAGAATGTTAAATCTGGTTCAGTTTCAGAGAAAGAT 120 Query 121 ACTAATATTCAGGAACCTTGGTATTGGGATCCTGATGTGGTCCCAAAGTTGAAGGCTGAG 180 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct 121 ACTAATATTCAGGAACCTTGGTATTGGGATCCTGATGTGGACCCAAAGTTGAAGGCCGAG 180 Query 181 TACAAG-AAAA--ATTCGCATGTGAATAGGCAAGCAGGACTTTGGTCTGGTCCTAATAAC 237 |||||| |||| ||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct 181 TACAAGAAAAACCATTCGCATGTGAATAGGCAAGCAAGACTTTGGTCTGGTCCAAATAAC 240 Query 238 AAGCATCCATGGTATGATGCTCCTGCTACGGTGAAGGTGAAAAGaaaaaaaGGTCTTTGC 297 ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct 241 AAGCATCCATGGTATGATGCTCCTGCTACGGTGAAGGTGAAAACAAAAAAGGGTCTTTGC 300 Query 298 AATATGAACATAGAATTTACATTGGGATGGCCTCCTCAATTAGTCTCTGAGATGCTTACT 357 ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 301 AATTTGAACATAGAATTCACATTGGGATGGCCTCCTCAATTAGTCTCTGAGATGCTTACT 360 Query 358 AATCCAAGAAACCTAAATTTCTTCAGATTATTCGACAGGGAATTTCGCCAACGTTTGGAC 417 |||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 361 AATCCAAGAAACATAAATTTCTTCAGATTATTCGATAGGGACTTTCGCCAACGTTTGGAC 420 Query 418 AACAAATCAACAAAGGTTTTGAAGAAAGACGGACCAAGGCAGATCACGGA-AGTGaaaaa 476 |||||||||||||||||||||||||| |||||||| |||||||||| || ||||||||| Sbjct 421 AACAAATCAACAAAGGTTTTGAAGAAGGACGGACCGCGGCAGATCAC-GAGAGTGAAAAA 479 Query 477 aaCTTTTAGATATAAGCTTCTCGGGTTG-TCTATAGCTATCCCTATACATCTAATCATCG 535 |||||| ||||||||||| || ||| | |||||||||||||| |||||||||||||||| Sbjct 480 AACTTTGAGATATAAGCTCCTTGGG-CGCTCTATAGCTATCCCGATACATCTAATCATCG 538 Query 536 ATGAAAACCATCAAAATCTTACTGCAAAATTTAAGAAAAAGAAAATGATGTACATGAAAG 595 ||||||||||| |||| || || ||||||| ||||||| ||||||||||||||||||||| Sbjct 539 ATGAAAACCATAAAAACCTAACGGCAAAATATAAGAAAGAGAAAATGATGTACATGAAAG 598 Query 596 TGTTTGAGGGTAGCTGGAAAGTGGAGCCACTATACGCAGATCAGGAACGTTTATGCAAGT 655 ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 599 TGTTTGAGGGTAGATGGAAAGTGGAGCCACTATACGCAGATCAGGAACGCTTATGCAAGT 658 Query 656 CTAGGTCGCGGATTAATGGAGAAGAATACAAAAAATGTAGTGGCGGAAAAGGAAGGATTG 715 |||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||| Sbjct 659 CTAGGTCGCGGATTAATGAAGAAGAGTACAAAAAATGTAGTGACGGAAAAGGAAGGATTG 718 Query 716 GATCAAAAGTGACAATGGAGCAGATCTTTCAGCCTTGTTCTCTTCTTAATGTGCCACCGA 775 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 719 GATCAAAGGTGACAATGGAGCAGATCTTTCAGCCTTGTTCTCTTCTTAATGTGCCACCGA 778 Query 776 TTTCTTGGTTCATCCGTGAGATCACCATAAAAACATTCAAGAATTTGCTCGAAGATCTTA 835 |||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||| Sbjct 779 TTTCTTGGTTCATCCGTGAGATCACCATCAAAACAATAAAGAATTTGCTCGAAGATCTTA 838 Query 836 GACAATTTGTTATCGACATGCACAAAAGTTCAGACTCGGAATGA 879 ||||||||||||||||||||||||||| ||||||| |||||||| Sbjct 839 GACAATTTGTTATCGACATGCACAAAAATTCAGACCCGGAATGA 882 > AT1G23660.1 | Symbols: | Domain of unknown function DUF220 | chr1:8371609-8372845 REVERSE LENGTH=868 Length=868 Score = 424 bits (229), Expect = 1e-117 Identities = 490/611 (80%), Gaps = 37/611 (6%) Strand=Plus/Plus Query 238 AAGCATCCATGGTATGATGCTCCTGCTACGGTGAAGGTGAAAAGaaaaaaaGGTCTTTGC 297 |||||||||||||||||||||||||||| ||||||||||| || |||||| ||||||||| Sbjct 242 AAGCATCCATGGTATGATGCTCCTGCTAAGGTGAAGGTGACAACAAAAAATGGTCTTTGC 301 Query 298 AATATGAACATAGAATTTACATTGGGATGGCCTCCTCAATTAGTCT-CTGAGATGCTT-A 355 |||||||||||||||||| | |||||| |||||| || ||||| | |||||| || | Sbjct 302 CATATGAACATAGAATTTAAACTGGGATTACCTCCTGAAGGAGTCTAC-GAGATG-TTCA 359 Query 356 CTAATCCAAGA-AACCTAA--ATTTCTTCAGATTATTCGACAGGGAATTTCGCCAACGTT 412 ||||||||| | ||| || | | ||||| | | |||| || ||||||||| Sbjct 360 CTAATCCAA-ACAAC-TATCCAGT-CTTCAAAA-AG--GACAAGGCCGGGCGCCAACGTC 413 Query 413 TGGACAACAAATCAACAAAGGTTTTGAAGAAAGACGGACCAAGGCAGATCACGGA-AGTG 471 |||| |||||||||| ||| |||||||||||| | ||||| ||||||| |||||| | || Sbjct 414 TGGAAAACAAATCAAGAAAAGTTTTGAAGAAAAATGGACCGAGGCAGACCACGGAGA-TG 472 Query 472 aaaaaa-aCTTT-TAGATATAAGCTTCTCGGGT--TGTCTATAGCTATCCCTATACATCT 527 ||||| | ||| || | || |||| | | | || | ||| ||||| |||||||| Sbjct 473 GAAAAAGA-TTTGTAC-TGGAA-CTTC-CTTTTCATATCCAGAGCAATCCCGATACATCT 528 Query 528 AATCATCGATGAAAACCATCAA-AATCTTACTGCAAAATTTAAGAAAAAGAAAATGATGT 586 | | ||||||||||| ||| || ||||| || ||||||| || || |||||| ||||||| Sbjct 529 AGTTATCGATGAAAATCAT-AAGAATCTCACAGCAAAATATAGGACAAAGAATATGATGT 587 Query 587 ACATGAAAGTGTTTGAGGGTAGCTGGAAAGTGGAGCCA--CTATACGCAGATCAGGAACG 644 |||||||||| ||||||||||||||||||| |||| || | | |||||||||||| Sbjct 588 TTTTGAAAGTGTTGGAGGGTAGCTGGAAAGTGGTGCCAGACTTT--GTAGATCAGGAACG 645 Query 645 TTTATGCAAGTCTAGGTCGCGGATTAA-TGGAGAAGAATACAAAAAATGTAGTGGCGGAA 703 || |||||||| |||| || || || | ||||||||||||||| ||||||||| ||| Sbjct 646 CTTGTGCAAGTCAAGGTTGCCGAA-AAGTCGAGAAGAATACAAAAGATGTAGTGGTGGAC 704 Query 704 AAGGAA-GGATTGGATCAAAAGTGACAATGGAGCAGATCTTTCAGCCTTGTTCTCTTCTT 762 |||||| || |||| || || ||||| ||||||||||||||| |||||| | |||||||| Sbjct 705 AAGGAAAGG-TTGGGTCCAAGGTGACCATGGAGCAGATCTTTAAGCCTTCTCCTCTTCTT 763 Query 763 AATGTGCCACCGATTTCTTGGTTCATCCGTGAGATCACCATAAAAAC-ATTCAAGAATT- 820 ||| |||||||| |||||||| | ||||||| ||| ||||| ||||| | ||||| || Sbjct 764 AATCTGCCACCGGTTTCTTGGATAATCCGTGGGATTACCATCAAAACCAC-CAAGA-TTC 821 Query 821 TGCTCGAAGAT 831 ||||||||||| Sbjct 822 TGCTCGAAGAT 832 > AT1G23610.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr1:8362864-8363675 REVERSE LENGTH=667 Length=667 Score = 291 bits (157), Expect = 1e-77 Identities = 254/300 (85%), Gaps = 10/300 (3%) Strand=Plus/Plus Query 570 GAAAAAGAAAATGATGTACATGAAAGTGTTTGAGGGTAGCTGGAAAGTGGAGCCACTATA 629 |||| ||||||||| || |||||||||||||||||||||||||||||| ||||||||||| Sbjct 307 GAAAGAGAAAATGAAGTTCATGAAAGTGTTTGAGGGTAGCTGGAAAGTCGAGCCACTATA 366 Query 630 CGCAGATCAGGAACG-TTTATGCAAGTCTAGGTCGCG-GATTAATGGAGAAGAATACAAA 687 || |||||||||||| ||| |||| |||||||||| | || || | |||||| |||||| Sbjct 367 CGTAGATCAGGAACGCTTT-TGCAGGTCTAGGTCG-GTGAATAGTCAAGAAGAGTACAAA 424 Query 688 AAATGTAGTGGCGGAAAAGGAAGGATTGGATCAAAAGTGACAATGGAGCAGATCTTTCAG 747 |||||||| |||||| |||||| |||| ||| | ||||||||||||| |||||| || Sbjct 425 AAATGTAGCGGCGGACGAGGAAGAATTGCATCGATGGTGACAATGGAGCTTATCTTTTAG 484 Query 748 CCTTGTTCTCTTCTTAATGTGCCACCGATTTCTTGGTTCATCCGTGAGATCACCATAAAA 807 |||| | | ||||||||| |||||||| |||||||| ||||||||| ||||||||| ||| Sbjct 485 CCTTCTACCCTTCTTAATCTGCCACCGGTTTCTTGGATCATCCGTGGGATCACCATCAAA 544 Query 808 A-CATTCAAGAAT-TTGCTCGAAGATCTTAGACAATTTGTTATCGAC-ATGCACAAAAGT 864 | || ||| ||| ||||| |||||||||||| ||| ||||||| | || ||||||||| Sbjct 545 ATCAC-CAA-AATGTTGCTAGAAGATCTTAGAAAATATGTTATC-ATGATCCACAAAAGT 601 > AT1G23600.1 | Symbols: | Domain of unknown function DUF220 | chr1:8361004-8362485 REVERSE LENGTH=1134 Length=1134 Score = 233 bits (126), Expect = 2e-60 Identities = 443/589 (75%), Gaps = 49/589 (8%) Strand=Plus/Plus Query 238 AAGCATCCATGGTATGATGCTCCTGCTACGGTGAAGGTGA-AAAGaaaaaaaGGTCTTTG 296 |||||||||||||||||| | ||| | | |||||||||| || | ||||| |||||||| Sbjct 305 AAGCATCCATGGTATGATCCCCCTCCAAAAGTGAAGGTGACAATG-AAAAAGGGTCTTTG 363 Query 297 CAATATGAACATAGAATTTACATTGGGATG-GCCTCCTCAAT-TAGTCTCTGA-GATGC- 352 | |||||||||||||||| ||||| ||| | ||||||| || || | | | || | Sbjct 364 CCATATGAACATAGAATTGACATTAGGA-GTGCCTCCT-GATGGAG-C-AT-ACGA-ACT 417 Query 353 TTAC-T-AATCCAAGAAACCTA-AATTTCTTCAGATTATTCGACAGGGAATTTCGCCAAC 409 || | | ||||||| ||| || | ||||| | ||| | |||| | | || |||| Sbjct 418 TTTCATCAATCCAACCAACATACCA-TTCTT-TG-TTA-TAGACAAGTCAGGGCGACAAC 473 Query 410 GTT-TGGAC-AACAAATCAACAAAGGTTTTGAAGAAAGACGGACCAAGGCAGATCACG-G 466 || ||| | |||||||||| |||| ||||||||||||| ||||| ||||||| | || | Sbjct 474 -TTCTGG-CAAACAAATCAAGAAAGATTTTGAAGAAAGATGGACCTAGGCAGA-C-CGTG 529 Query 467 AA-GTGaaaaaaaCTTTTAGATATAAG-CTT-CTCGGGTTGTCTATAGCTATCCCTA-TA 522 || ||||| ||| | | | | || | ||| || |||| ||| | || |||| | || Sbjct 530 AAGGTGAAGAAAGC-TGT-GGCATGGGACTTCCTTTGGTTCTCTGGATCTCTCCCCATTA 587 Query 523 CATCTAATCATCGATGAAAACCATCAAA-ATCTT-ACTGCAAAATTTAAGAAA-AAGAAA 579 || |||| || | ||||| || ||| | ||| | | ||||| ||||||| || ||| Sbjct 588 -ATTTAATTGTCAACGAAAA-CAAAAAAGACCTTGA-AGTAAAATATAAGAAAGAA-AAA 643 Query 580 ATGATGTACATGAAAGTGTTTGAGGGTAGCTGGAAAGTGGAGCCACTATACGCAGAT-CA 638 ||||||| |||||||||||| || |||||||||||| | || |||||||| | |||| || Sbjct 644 ATGATGTTCATGAAAGTGTTCGAAGGTAGCTGGAAAATAGAACCACTATATGTAGATGCA 703 Query 639 GGAACGTTTATGCAAG-TCTAGGTCGCGGATTAATGGAGAAGAATACAAAAAATGTAGTG 697 || || ||||||||| | | | | | | | |||||||||||||||||||||||| Sbjct 704 -GATCGCTTATGCAAGAAC-ATGAAACCTAAGAGTCGAGAAGAATACAAAAAATGTAGTG 761 Query 698 GCGGAAAAGGAAGGATTGGATCAAAAGTGACAATGGAGCAGATCTTT-CAGCCTTGTTCT 756 ||||| |||||| |||| | |||||||||| ||||| || || ||| ||||| | | || Sbjct 762 GCGGACAAGGAAAAATTGCACCAAAAGTGACTATGGACCA-ATATTTTCAGCCATATCCT 820 Query 757 CTTCTTAA-TGTGCCACCGATTTCTTGGT-TCATCCGTGAGATCACCAT 803 ||| |||| | |||| ||| ||||||||| | || ||| | |||||||| Sbjct 821 CTT-TTAAATCTGCCGCCGTTTTCTTGGTAT-ATTCGTAACATCACCAT 867 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 42899961538 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5