BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg900811

Length=444
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G30330.1 | Symbols: BLOS1 | GCN5L1 family protein | chr2:129...   649    0.0  


> AT2G30330.1 | Symbols: BLOS1 | GCN5L1 family protein | chr2:12928767-12929737 
REVERSE LENGTH=786
Length=786

 Score =  649 bits (351),  Expect = 0.0
 Identities = 412/442 (93%), Gaps = 2/442 (0%)
 Strand=Plus/Plus

Query  1    ATGTCACTCTCGGCGGCGCGTGGGCGTGTGTTACCGTTTTCGGAGAAGGAGAAAACGGAA  60
            ||||||||||||||||||||||| ||| || |||| ||||  |||||||||||| | |||
Sbjct  62   ATGTCACTCTCGGCGGCGCGTGGCCGTATGCTACCTTTTTTAGAGAAGGAGAAATCAGAA  121

Query  61   GAAGAGTCTGGAACAT-TGGAATCGAGTCTCTTACAGCTAATCGATGACAATCGTCGATC  119
            |||||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||||
Sbjct  122  GAAGAGTCTGAAAC-TCTGGAATCGAGTCTCTTACAGCTAATCGACGACAATCGTCGATC  180

Query  120  GTCGTTACAGCTCCGGGAAAAGACCGAGAGATCGAGGAAGGAAGCGATCAGACACGCGGC  179
             |||||||||||||||||||| |||||||||||||| |||||||| ||||| ||||||||
Sbjct  181  ATCGTTACAGCTCCGGGAAAAAACCGAGAGATCGAGAAAGGAAGCAATCAGGCACGCGGC  240

Query  180  GAGAACGGCGGATCTGCTAGTGAAGGCGGTGAACGGAGGAGTGGAAGAGTGTTTCGTGAA  239
            |||||||||||||||||||||||||||||||||||||||||| || || |||||||| ||
Sbjct  241  GAGAACGGCGGATCTGCTAGTGAAGGCGGTGAACGGAGGAGTAGAGGAATGTTTCGTTAA  300

Query  240  CGAGAAACGGATTGAGTCGGAGATTAGGAATCTTGCGGTTACGGTGGCGAAATTCGGCAA  299
            ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||
Sbjct  301  CGAGAAACGGATTGAGTCGGAGATTAGGAATCTTGCCATTACGGTGGCGAAATTCGGCAA  360

Query  300  ACAAACGGATCAATGGCTTGCCGTCACTCACGCCGTTAATAGCGCCGTTAAGGAGATTGG  359
            |||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct  361  ACAAACGGATCAGTGGCTTGCCGTCACTCACGCCGTTAATAGCGCCGTAAAGGAAATTGG  420

Query  360  AGATTTTGAGAATTGGATGAAAACTATGGAGTTTGATTGTAAGAAAATCACTGCGGCAAT  419
            ||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||
Sbjct  421  AGATTTTGAGAATTGGATGAAGACGATGGAGTTTGATTGTAAGAAAATCACTGCTGCAAT  480

Query  420  TCGCAACATTCATGAAGATCAA  441
            ||| ||||||||||||||||||
Sbjct  481  TCGAAACATTCATGAAGATCAA  502



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 21112454580


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5