BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg900951 Length=564 Score E Sequences producing significant alignments: (Bits) Value AT2G31425.1 | Symbols: | Plant invertase/pectin methylesterase... 776 0.0 > AT2G31425.1 | Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily protein | chr2:13394721-13395720 FORWARD LENGTH=736 Length=736 Score = 776 bits (420), Expect = 0.0 Identities = 521/569 (92%), Gaps = 10/569 (2%) Strand=Plus/Plus Query 1 ATGGCCAAAATG-CTAATAAAACACaaaaaaaTTCTTCCATTGTTGTTAT-TGTTAGTGC 58 |||||||||||| | ||||| ||||| || |||||| | ||||||||| | ||||||| Sbjct 36 ATGGCCAAAATGAC-AATAACACACATGAAGTTTCTTCAACTGTTGTTATCT-TTAGTGC 93 Query 59 TCTTTGCATTCCCAATGTCAAATACAATGCCAATCACAGACGTACACAATTTTTGCAAGG 118 |||||| |||| ||||||||||| ||||||||||| |||||||||| ||||||||||||| Sbjct 94 TCTTTGTATTCTCAATGTCAAATGCAATGCCAATCTCAGACGTACATAATTTTTGCAAGG 153 Query 119 AAACGTTTGAAGTAGATTTCTGCCTGAAATACATTGGGTCGGACCAACGTATGGTAGCCG 178 |||||||||||||||| |||||| |||||||||||||||||||||||||| | ||||||| Sbjct 154 AAACGTTTGAAGTAGAATTCTGCATGAAATACATTGGGTCGGACCAACGTCTCGTAGCCG 213 Query 179 CACGCGACTTCAGTGACATGTTTTTAATTGCGATATCTGAGACCCAAATTCAAGTGACCA 238 |||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||| Sbjct 214 CACGCGACTTCAGTGACATGCTTTTAATTCCGATATCTGAGACTCAAATTCAAGTGACCA 273 Query 239 ATGCAATTACACATATCAACAATATCCGCCAAA-GTTTAAATGATC-CGCTTGGGAAGAA 296 ||||||| ||||| ||||||||||||||||||| |||| ||||| | ||||||| ||||| Sbjct 274 ATGCAATCACACAAATCAACAATATCCGCCAAAGGTTT-AATGA-CACGCTTGGAAAGAA 331 Query 297 TCGGATCGGTGTATGCGAGGAAAAATACGAG-GTCGCGGCCACTAGTTTTCACAAGGCTT 355 |||||||| | |||||||||||||||||||| | ||||| |||||||||||||||||||| Sbjct 332 TCGGATCGCTCTATGCGAGGAAAAATACGAGAG-CGCGGGCACTAGTTTTCACAAGGCTT 390 Query 356 GGGAAGTTGGACAGAAAAAGTCAAATTCATCAACGGACCGTATGGAGATAACCAGAAGCA 415 ||||||| ||||||||||||||||||||||| ||||||| |||||| |||||| ||| || Sbjct 391 GGGAAGTCGGACAGAAAAAGTCAAATTCATCGACGGACCATATGGAAATAACCCGAAACA 450 Query 416 CGCAAGCTGGCTTTGATGCTGTGTGTGAGTGCGAAGACGAATGGTCAAAGCATGGTCCGA 475 ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct 451 CGCAAGCTGGCTTTGATGCTGTGTGCGAGTGCGAAGACGAATGGGCAAAGCATGGTCCGA 510 Query 476 GACAAGAGTCTCCTCTCACTTTCTATTACCATAATGTTCTAAAACTATGTCAAATTACTC 535 ||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||| Sbjct 511 AACAAGAGTCTCCTCTCACTTTCTATTACCATAACGTTCTGAAACTATGCCAAATTACTC 570 Query 536 GTCTTATTATCAGCAAGCTTGAGGCTTAA 564 |||||||||||||||||||| |||||||| Sbjct 571 GTCTTATTATCAGCAAGCTTTAGGCTTAA 599 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 27076205233 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5