BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg900990 Length=1206 Score E Sequences producing significant alignments: (Bits) Value AT2G31860.1 | Symbols: | pseudogene, poly (ADP-ribose) glycohy... 316 2e-85 > AT2G31860.1 | Symbols: | pseudogene, poly (ADP-ribose) glycohydrolase, putative, contains Pfam domain, PF05028: poly (ADP-ribose) glycohydrolase (PARG); blastp match of 59% identity and 1.4e-19 P-value to EGAD|134505|143482 114E2.c protein {Drosophila melanogaster} | chr2:13542483-13545266 REVERSE LENGTH=2784 Length=2784 Score = 316 bits (171), Expect = 2e-85 Identities = 184/190 (97%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 248 AGAGAATGTCGAAAGAAGAATCAAGCAGATGGTTTAACGAGGTTTTACCTGAAATGGCTT 307 ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| Sbjct 332 AGAGAATGTCGAAAGAAGAATCAAGCAGATGGTTTAACGAGTTTTTACCTGCAATGGCTT 391 Query 308 GTCTTCTTCTGAGATTCCCATCTCTCTTGGAACT-ACACTATCTAAATTCAGACAATCTC 366 |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct 392 GTCTTCTTCTGAGATTCCCATCTCTCTTGGAA-TCACACTATCTAAATTCAGACAATCTC 450 Query 367 ATCAATGGAACCAAAACCGGTCTTCGTGTCTTAGGCCCCAACAAAGCCGGCATTGTGTTT 426 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 451 ATCAATGGAACCAAAACCGGTCTTCGTGTCTTAGTCCCCAACAAAGCCGGCATTGTGTTC 510 Query 427 CTCAGCCAGG 436 |||||||||| Sbjct 511 CTCAGCCAGG 520 Score = 303 bits (164), Expect = 2e-81 Identities = 196/211 (93%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 532 CTATT-CGGGAGCCTAATCAACACGGGACA-AAACGAGCATCAAGAGAACAAGATAAAGT 589 ||||| | |||||||||||||||||||| | ||| ||||||||||||||||||||||||| Sbjct 765 CTATTGCAGGAGCCTAATCAACACGGGA-AGAAATGAGCATCAAGAGAACAAGATAAAGT 823 Query 590 GCATAATTCATTACTTCCAAAGGCTATCTTCATGTATCTCTCCTGGATTTGTCTCATTCG 649 ||||||||||||||||||| |||||||||||| |||||||||| || || |||||||||| Sbjct 824 GCATAATTCATTACTTCCAGAGGCTATCTTCAAGTATCTCTCCAGGGTTCGTCTCATTCG 883 Query 650 AACGAAAGATTCTCTCTTTAGAACAAGGTTCTTCTTGTCTTGATGAAGGCTTTTGGAGAA 709 ||||||||||||||||||||||||||| ||||||| |||||||||||| |||||| ||| Sbjct 884 AACGAAAGATTCTCTCTTTAGAACAAGATTCTTCTACTCTTGATGAAGGGTTTTGGGGAA 943 Query 710 AATCTACTGTCAATCTCTGCCCTGTTGAGGT 740 ||||||||||||||||||||||||||||||| Sbjct 944 AATCTACTGTCAATCTCTGCCCTGTTGAGGT 974 Score = 270 bits (146), Expect = 2e-71 Identities = 166/176 (94%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 1027 AGGGAGACCAATAAGGCTCTATGTGGTTTCCTTCACGTCTGCAAGAAGCAGGGCAACGCG 1086 ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| | Sbjct 1654 AGGGAGACCAATAAGGCTCTATGTGGTTTCCTTCACGTCTGCAAGAATCAGAGCAACGGG 1713 Query 1087 CAATGCATAGATCATGAAGATGGAGTCGGTGTTGCTACAGGGAATTGGGGATGTGGTGCT 1146 || || ||||||||||||||||| |||||||| | ||||||||||||||||||||||||| Sbjct 1714 CAGTGTATAGATCATGAAGATGGGGTCGGTGTCGTTACAGGGAATTGGGGATGTGGTGCT 1773 Query 1147 TATGGTGGAGATCCTGAGCTCAAGTCTCTTCTTCAGTGGCTTGCTGTTTCACAGGT 1202 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct 1774 TATGGTGGAGATCCTGAGCTCAAGTCTCTTCTTCAATGGCTTGCGGTTTCACAGGT 1829 Score = 209 bits (113), Expect = 4e-53 Identities = 119/122 (98%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 841 CAGGAAGAGATTAGATTTATGATCAATCCAGAATTGATCGTTGGTATGCTCTTCTTACCA 900 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct 1231 CAGGAAGAGATTAGATTCATGATCAATCCAGAATTGATCGTTGGTATGCTCTTTTTACCA 1290 Query 901 ACCATGGAAGTCACTGAAGCCATTGAAGTTGTTGGTGCAGAAAGATTCTCTCATTACACA 960 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1291 ACCATGGAAGTCACTGAAGCCATTGAAGTTGTTGGTGCAGAAAGATTCTCTCTTTACACA 1350 Query 961 GG 962 || Sbjct 1351 GG 1352 Score = 189 bits (102), Expect = 5e-47 Identities = 106/108 (98%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 433 CAGGAACTTATAGGAGCTTTGCTTTCATGTTCTTTCTTCTGTTTGTTTCCTGTCGATGAT 492 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 600 CAGGAACTTATAGGAGCTTTGCTTTCATGTTCTTTCTTCTGTTTGTTCCCTGTCGATGAT 659 Query 493 AGAGGCTCGAATCATCTTCCAATCATCAATTTCGACAAACTATTCGGG 540 |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 660 AGAGGCTCAAATCATCTTCCAATCATCAATTTCGACAAACTATTCGGG 707 Score = 172 bits (93), Expect = 5e-42 Identities = 103/108 (95%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 737 AGGTTCATACTTATGGTTTGATCGAGGATCATAGCGTTGAAGCTCTTGAAGTTGACTTTG 796 |||||| ||||| |||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct 1049 AGGTTCGTACTTCTGGTTTGATCGAGGATCAAAGCGTAGAAGCTCTTGAAGTTGACTTTG 1108 Query 797 CCAATAAGAACTTAGGAGGTGGCGCTCTTCGCAAGGGATGTGTCCAGG 844 |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1109 CCAACAAGAACTTAGGAGGTGGCGCTCTTCGCAAGGGATGTGTCCAGG 1156 Score = 115 bits (62), Expect = 9e-25 Identities = 66/68 (97%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 962 GATATTCATCTTCATTTCGGTTTTCTGGTGACTACATTGATACAAAGGAAACAGATGTTT 1021 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1438 GATATTCATCTTCGTTTCGGTTTTCCGGTGACTACATTGATACAAAGGAAACAGATGTTT 1497 Query 1022 TCGGAAGG 1029 |||||||| Sbjct 1498 TCGGAAGG 1505 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 59236643100 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5