BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg900998 Length=1728 Score E Sequences producing significant alignments: (Bits) Value AT2G31920.1 | Symbols: | Plant protein of unknown function (DU... 2431 0.0 > AT2G31920.1 | Symbols: | Plant protein of unknown function (DUF936) | chr2:13574032-13576367 REVERSE LENGTH=1779 Length=1779 Score = 2431 bits (1316), Expect = 0.0 Identities = 1599/1737 (92%), Gaps = 14/1737 (1%) Strand=Plus/Plus Query 1 ATGGCTTGCCTCACTCCTGGAGTTCTCTCCAACCTTCTCAATATCGCCGCCGGAAACTCA 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGCTTCCCTCACTCCTGGAGTTCTCTCCAACCTTCTCAATATCGCCGCCGGAAACTCA 60 Query 61 CTTTCTTCGCCGCCATTATTGTCCTCACACCGGTCACCACTCCTCCAAGTCATAGAAATC 120 | ||||||||||||||| ||||| || || || ||||||||||||||||||||||||||| Sbjct 61 CCTTCTTCGCCGCCATTGTTGTCTTCTCATCGTTCACCACTCCTCCAAGTCATAGAAATC 120 Query 121 GTTCCTTGTCTCTCTGACGACCAATGGCGTAGCGAAGCATTCTTCGTCAAAGTCTCTGAC 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GTTCCTTGTCTCTCTGACGACCAATGGCGTAGCGAAGCATTCTTCGTCAAAGTCTCTGAC 180 Query 181 TCTCTCCACGCAGCTTACGTCGCCGTTTCCGCCGGAGATGACGCTGATCTAATACGTTCC 240 |||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||| Sbjct 181 TCTCTCCACGCAGCTTACGTCGCCGTTTCCACCGGTGATGACGCTGATCTGATACGTTCC 240 Query 241 GATGAAATTCAGCTAGGACAGTTTGTTTACATATGCGGTGGTTTACACGTTGAGAAAGGA 300 |||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||| Sbjct 241 GATGAAATTCAGCTAGGACAATTCATTTACATATGCGGTGGTTTACACGTCGAGAAAGGA 300 Query 301 TGTCCTGTTCCTGTAATCCGTGGATTGAAACCAGTTCCTAAGCGGAGGATGTGTGTTGGA 360 ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 301 TGTCCTGTTCCTGTAATCCGTGGTTTGAAACCAGTCCCTAAGCGGAGGATGTGTGTTGGA 360 Query 361 AACCCTAGCGATCTTTTTTCTAGCGATTTGCTACATTC-TTTTACTCAGGTCTCTGTTTC 419 |||||||||||||||| ||||||||||||||| | ||| ||||||||||||||||||||| Sbjct 361 AACCCTAGCGATCTTTATTCTAGCGATTTGCTGC-TTCCTTTTACTCAGGTCTCTGTTTC 419 Query 420 GCCGACGGCCAAGAAGAAGAAGAATCTTGATGAAACAAGGAGATTGAGTTTGGATTCCGC 479 |||||| | | |||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct 420 TCCGACGACGACGAAGAAAAAGAATCTTGTTGAAACAAGGAGATTGAGTTTGGATTCCGC 479 Query 480 GAGAAGGAGTTGTTGGGATCAAACTCCTCCGGTGACCCACCGCCGTGACGCCGCAATGCT 539 |||||||||||||||||||||||||||||||||||| | || |||||||| ||| |||| Sbjct 480 GAGAAGGAGTTGTTGGGATCAAACTCCTCCGGTGACTCGTCGTCGTGACGCTGCATTGCT 539 Query 540 TCTTTCTTCACCACGTCCTAAATCCAAATTGGTCTTGAGTGATAAGAATCTGCTAAAGAA 599 ||||||||||||||||| |||||| ||||||||||||| |||||||| ||||||||||| Sbjct 540 TCTTTCTTCACCACGTCTTAAATCTAAATTGGTCTTGAATGATAAGAGTCTGCTAAAGAT 599 Query 600 TGAATTGCCATCAAAG-AGCTTTAACTGT--AACAC-C-CCTGCTTTAAGAAACAAGAAT 654 ||| | ||||||||| | |||||||||| ||| | | ||||| ||||| ||||||||| Sbjct 600 TGAGTCCCCATCAAAGTA-CTTTAACTGTGGAAC-CTCTCCTGCCTTAAGGAACAAGAAT 657 Query 655 GTGGATAAGCCTGCATCACCTATATCAATGGCCAATTCTCCAAAAGATGGTATCAAGTCA 714 |||| |||||||| |||||||||||| ||||| | |||||| |||||||||||||||||| Sbjct 658 GTGGTTAAGCCTGGATCACCTATATCCATGGCTAGTTCTCCGAAAGATGGTATCAAGTCA 717 Query 715 CCTATACCAAAGCACCTTAACAGCGAAACCCGGGCTTTAAGAAGTAGATATGTGGTGAAG 774 |||||| |||||||||||||| ||||||||| ||||||||||| ||||||||||| ||| Sbjct 718 CCTATATCAAAGCACCTTAACTGCGAAACCCCTGCTTTAAGAAGCAGATATGTGGTCAAG 777 Query 775 CCTGCATCACCTATTTCCATGGCTAGTTCTCCGAAAGATGGTATCAAGTCGTTGTCAAAG 834 |||||||||||||| ||| || |||| ||||| ||||||||||||||||| ||||||||| Sbjct 778 CCTGCATCACCTATATCCGTGACTAGGTCTCCTAAAGATGGTATCAAGTCCTTGTCAAAG 837 Query 835 GCAGTGGCTCCTCCGGTTGCGCTTTTTAAGGTGCCTTCAAGTCACATGACTTGGTCTGAT 894 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 838 GCAGTGACTCCTCCGGTTGCGCTTTTTAAGGTGCCTTCAAGTCACATGACTTGGTCTGAT 897 Query 895 CAAAGAATCTTATGGAATGGACTCCCAAAAACCATTCAATTTCTCGGAAAGGAAGTTTCA 954 |||||||| | ||||| |||||||||||||||||||||||| |||||||||||||||||| Sbjct 898 CAAAGAATGTCATGGAGTGGACTCCCAAAAACCATTCAATTGCTCGGAAAGGAAGTTTCA 957 Query 955 TCACATAGGCAAGTAGCAGTTTCGGCAGCAGTAAGCGCACTGGAGGAAGCATCTGCCATG 1014 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 958 TCACATAGGCAAGTAGCAGTTTCGGCAGCAGTAAGTGCACTGGAGGAAGCATCTGCCATG 1017 Query 1015 GAGTCTGTTCTACTCT-GTTTGCAGACCTTTGCCGAGCTGTGTGATTCAACTAAGAAATT 1073 |||||||||||| | | |||||||| |||||||||||||||||||||| |||||||| || Sbjct 1018 GAGTCTGTTCTATT-TAGTTTGCAGGCCTTTGCCGAGCTGTGTGATTCTACTAAGAAGTT 1076 Query 1074 ATCTGCAGGACAAGTAGTGAGCC-GATTCTTAGACATCTACCACAGTACACAGAATACAT 1132 |||| | |||||||||||| ||| | ||||| ||||||||||||| |||||||||||||| Sbjct 1077 ATCTACTGGACAAGTAGTG-GCCCGGTTCTTGGACATCTACCACAATACACAGAATACAT 1135 Query 1133 GCAAAGCGGTCCATCGGTTGCTTACTCAAAATGGAAAGAACGGCTCACGTAGATTAGTAG 1192 |||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||| Sbjct 1136 GCAAAGCGGTCCATCGGTTGCTTACTCAAAATCGAAACAACGGCTCGTGTAGATTAGTAG 1195 Query 1193 TAAACAAAAATGCAGCATCTTGGGTTCAAACTGCCGTAGTGACCAATTTTTCTCAGTTCA 1252 |||| ||||||||| |||||||||||||| |||| |||||||| |||||||||||||| Sbjct 1196 TAAATAAAAATGCAACATCTTGGGTTCAAGCTGCGGTAGTGACTGGTTTTTCTCAGTTCA 1255 Query 1253 ATTTATTCAAAGAGCCTGGAAAGAAAGAAGATGCTGCTGATCATCACTACATTGTTATAC 1312 | ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct 1256 ACTTATTTAAAGAGCCTGGAAAGAAAGGTGATGCTGCTGATCATCACTACATTGTTATGC 1315 Query 1313 AGAACTCATCCGAGAAAATGAAACCCAAGGAGACAACAAGTTCAAGAACCCCGTCTTACA 1372 ||||||||||||||||| |||| ||||||||||||||||||||||||||||| || |||| Sbjct 1316 AGAACTCATCCGAGAAACTGAACCCCAAGGAGACAACAAGTTCAAGAACCCCATCCTACA 1375 Query 1373 AAGGTGCAAAACCGCATGCAACTAAATATCGTTCTGTTTCAGACCGAAGTAGCTTCGAAG 1432 |||| || ||||||| |||||| ||| || ||||||||||||||||||||||||| |||| Sbjct 1376 AAGGCGCGAAACCGCCTGCAACGAAACATTGTTCTGTTTCAGACCGAAGTAGCTTAGAAG 1435 Query 1433 GTAAAAGCAGTCTGAATGAGTCAGCGAGTCTAGCGGACGAGTTAGTCCACGTTTCCAGCC 1492 |||||||||||||||| || ||| ||||||||||||| ||| ||||||| |||||||||| Sbjct 1436 GTAAAAGCAGTCTGAAGGATTCAACGAGTCTAGCGGATGAGCTAGTCCAAGTTTCCAGCC 1495 Query 1493 AATGGTTCTTGATTTATTTGGAGAATTCAGTGAACAAAGGGTCTTTCTTGGTGAAGAAGG 1552 |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| || Sbjct 1496 AATGGTTCTTGAAATATTTGGAGAATTCATTGAACAAAGGGTCTTTCTTGGTGAAGACGG 1555 Query 1553 AAGAAACAAATGGAAAAGAGTCTATTTTCGTCCACCTTAAAGCCGTAAACCATTGGCTCG 1612 ||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||| Sbjct 1556 AAGAAACAAATGGAAAAGAGTCTCTTCTCGTCCACCTTAAAGCTTTAAACCATTGGCTCG 1615 Query 1613 ATGGTCTGATCTTAAACCGAATGGAAACCAACGAGAAAGTCGAAGATTTAAGAAAGAAGC 1672 ||| ||||| ||||||| ||| ||||| ||||||||||||||||||||||||||||||| Sbjct 1616 ATGATCTGAACTTAAACAGAACAGAAACGAACGAGAAAGTCGAAGATTTAAGAAAGAAGC 1675 Query 1673 TGCAACGGTTTCTACTTGAGCATATTGAATTTGCCATTGGGGA-AGTTACAATTTGA 1728 |||||||||||||||||||||||||||||| || ||||||||| | ||||||| ||| Sbjct 1676 TGCAACGGTTTCTACTTGAGCATATTGAATCTGTCATTGGGGATACTTACAATATGA 1732 Score = 99.0 bits (53), Expect = 1e-19 Identities = 68/75 (91%), Gaps = 2/75 (3%) Strand=Plus/Plus Query 751 TTAA-GAAGTAGATATGTGGTGAAGCCTGCATCACCTATTTCCATGGCTAGTTCTCCGAA 809 |||| ||| ||| ||||||| ||||||| ||||||||| |||||||||||||||||||| Sbjct 643 TTAAGGAACAAGA-ATGTGGTTAAGCCTGGATCACCTATATCCATGGCTAGTTCTCCGAA 701 Query 810 AGATGGTATCAAGTC 824 ||||||||||||||| Sbjct 702 AGATGGTATCAAGTC 716 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 85441327590 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5