BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg901241

Length=264
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G34140.1 | Symbols:  | Dof-type zinc finger DNA-binding fami...   111    2e-24


> AT2G34140.1 | Symbols:  | Dof-type zinc finger DNA-binding family 
protein | chr2:14413758-14414765 REVERSE LENGTH=1008
Length=1008

 Score =  111 bits (60),  Expect = 2e-24
 Identities = 67/70 (96%), Gaps = 2/70 (3%)
 Strand=Plus/Plus

Query  1    TTTTCCTTTAAACCCGTTGAAGAACGTGGTGAATTTGGTTGCTATTGG-TACATACAGGC  59
            ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct  638  TTTTCCTCTAAACCCGTTGAAGAACGTGGTGAATTTGGTTGCTATTGGGTACATACAGGC  697

Query  60   TGGCAA-GTA  68
            |||||| |||
Sbjct  698  TGGCAAAGTA  707



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 12064259760


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5