BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg901281

Length=834
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G34530.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecu...  1230    0.0  


> AT2G34530.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecular_function 
unknown; INVOLVED IN: biological_process unknown; 
LOCATED IN: endomembrane system; EXPRESSED IN: flower; 
EXPRESSED DURING: petal differentiation and expansion stage; 
BEST Arabidopsis thaliana protein match is: unknown protein 
(TAIR:AT2G34540.2); Has 35333 Blast hits to 34131 proteins 
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; 
Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes 
- 9610 (source: NCBI BLink). | chr2:14548962-14550245 REVERSE 
LENGTH=1056
Length=1056

 Score = 1230 bits (666),  Expect = 0.0
 Identities = 782/834 (94%), Gaps = 23/834 (3%)
 Strand=Plus/Plus

Query  1    ATGAAGACCAAGTATGGAGCAGCACTTGCACCTGTCTTCCTCCTTGCTGGTGCATATGTC  60
            ||||| |||||||||||||||||| |||||||||| ||||||||||||| ||||||||||
Sbjct  29   ATGAAAACCAAGTATGGAGCAGCAGTTGCACCTGTATTCCTCCTTGCTGCTGCATATGTC  88

Query  61   GCTTGGAACTACATAAATCATGGTTTGTGGAGAAAGAAAGACGATAAAAATAGTCGTCGG  120
            ||||||||||||||||||| |||||| |||||||||||||||||| ||||| |  |||| 
Sbjct  89   GCTTGGAACTACATAAATCGTGGTTTATGGAGAAAGAAAGACGATGAAAAT-G--GTCGA  145

Query  121  GATATC-AG--AAAG---C-G------CGTTTCAGAACAAAGAAGAGATGGTAATGCTAA  167
            |||| | ||  ||||   | |      | ||||||||||||||||||||||||||| |||
Sbjct  146  GATA-CAAGAAAAAGCATCGGTAAAAACATTTCAGAACAAAGAAGAGATGGTAATGTTAA  204

Query  168  AAACATGGGTAAGGAGGCTTCTTCAGGAAGAGATGAAAGAACCCTCTCAAAATCTGTTTC  227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  205  AAACATGGGTAAGGAGGCTTCTTCAGGAAGAGATGAAAGAACCCTCTCAAAATCTGTTTC  264

Query  228  AATGGGAGCTATTCGAGGAGGAAAATTAGCACTACAGAGATTGCTTGATTTGCACTCATA  287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  265  AATGGGAGCTATTCGAGGAGGAAAATTAGCACTACAGAGATTGCTTGATTTGCACTCATA  324

Query  288  CCGCGTTGATACTTCTTCCCTTGCGAATGCTGAGA-TAGAATTTGAAGCATTGCTTTCCA  346
            ||||| ||| ||||||||||||||||||||||| | | ||||||||||||||||||||||
Sbjct  325  CCGCGGTGACACTTCTTCCCTTGCGAATGCTGA-ACTCGAATTTGAAGCATTGCTTTCCA  383

Query  347  AGGAAAACCCGGACTTTGGGTTGCTTCAGAGAGACATTGTGAAAATGGAAATGAGTGgaa  406
            ||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct  384  AGGAAAAGCCGGACTTCGGGTTGCTTCAGAGAGACATTGTAAAAATGGAAATGAGTGGAA  443

Query  407  aagaagcaaaaggag-tggagctattgaagaaag-cactggagaaagcaagaaaagaagg  464
            ||||||||||||||| || |||||||||| |||| || ||||||||||||||||||||||
Sbjct  444  AAGAAGCAAAAGGAGCTG-AGCTATTGAA-AAAGGCATTGGAGAAAGCAAGAAAAGAAGG  501

Query  465  gaaagGTCACGAGGCCTATGAGATTGAGATGTTGCTTGTGGAGATGTTGATCTACTTGGG  524
            ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct  502  GAAAGGTCATGAGGCTTATGAGATTGAGATGTTGCTTGTGGAGATGTTGATCTACTTGGG  561

Query  525  AAACATTGAAGAGGCTTCAAAATGTAAGTGTTTAGAGGATGAAGTCATAACAGATGCAAG  584
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  562  AAACATGGAAGAGGCTTCAAAATGTAAGTGTTTAGAGGATGAAGTCATAACAGATGCAAG  621

Query  585  ACGTCCTCTATATCAGACTATAATCCATTACCTTCGAGGTGATCCTATGAAGCAAGTCGA  644
            ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct  622  ACGTCCTCTATATCAGACTATAATCCATTACCTTCAAGGTCATCCTATGAAGCAAGTCGA  681

Query  645  GGAGACATTCAACAGGTTCAGAGAGATTCAAATTGGTCTACAATGGCCTGGAAGCTCAGA  704
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  682  GGAGACATTCAACAGGTTCAGAGAGATTCAAATTGGTCTACAATGGCCTGGAAGCTCAGA  741

Query  705  AGAATGTGAGATTGAACAAGTCACGTTTGATGAGTTCAAGAAAGTTATGGAGTCTCTCAA  764
            ||||||||| ||||| |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct  742  AGAATGTGAAATTGACCAAGTCACATTTGATGAGTTCAAGAAAGTTATGGAATCTCTCAA  801

Query  765  GCAAGAAATCGAAGACGGCAACAAAAGAAAATTGAAGTTAATCAAAGATAAAAC  818
            ||| |||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct  802  GCATGAAATCGAAGACGGCAACAAAAGAAAGTTGAAGTTAGTCAAAGATAAAAC  855



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 40639424923


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5