BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg901326
Length=1254
Score E
Sequences producing significant alignments: (Bits) Value
AT2G34850.1 | Symbols: MEE25 | NAD(P)-binding Rossmann-fold sup... 1515 0.0
AT1G30620.1 | Symbols: HSR8, MUR4, UXE1 | NAD(P)-binding Rossma... 1230 0.0
> AT2G34850.1 | Symbols: MEE25 | NAD(P)-binding Rossmann-fold superfamily
protein | chr2:14704632-14706191 REVERSE LENGTH=1114
Length=1114
Score = 1515 bits (820), Expect = 0.0
Identities = 910/954 (95%), Gaps = 4/954 (0%)
Strand=Plus/Plus
Query 300 CAATCTATCTCGAGGGAACCTCGGTGCAATCAAGATTTTGCAACAACTGTTTCCGGAACC 359
|||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 1 CAATCTATCTCGAGGGAACCTCGGTGCAGTCAAGATCTTGCAACAACTGTTTCCGGAACC 60
Query 360 TGGAAGGCTTCAATTCATTTATGCTGATCTTGGAGATGCAAAAGCTGTTAACAAAATATT 419
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 61 TGGAAAGCTTCAATTCATTTATGCTGATCTTGGAGATGCAAATGCTGTTAACAAAATATT 120
Query 420 TTCTGAAAACGCATTTGACGCTGTGATGCATTTCGCGGCTGTTGCTTATGTTGGAGAAAG 479
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 121 TTCTGAAAACGCATTTGACGCTGTGATGCATTTTGCTGCTGTTGCTTATGTTGGAGAAAG 180
Query 480 CACACAATTTCCTCTCAAGTATTATCACAATATTACATCGAACACATTGGTAGTTTTAGA 539
|||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 181 CACACAGTTTCCTCTCAA-TATTATCACAATATCACATCGAACACATTGGTAGTTTTAGA 239
Query 540 GACAATGGCTGCTTATGGTGTGAAGACTTTGATATATTCAAGCACATGTGCTACTTATGG 599
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 GACAATGGCTGCTCATGGTGTGAAGACTTTGATATATTCAAGCACATGTGCTACTTATGG 299
Query 600 AGAGCCTGAGAAGATGCCAATAACAGAGGAAACTCCTCAGGTTCCAATCAATCCATATGG 659
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 300 AGAGCCTGAGAAAATGCCAATAACAGAGGAAACTCCACAGGTTCCAATCAATCCATATGG 359
Query 660 AAAGGCTAAGAAGATGGCAGAAGATATCATCTTAGATTTCTCCAAGAATTCTAATATGGC 719
||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct 360 AAAGGCTAAAAAGATGGCAGAAGATATCATCTTGGATTTCTCCAAGAATTCTATTATGGC 419
Query 720 AGTTATGATCCGGAGGTTATATTTCAATGTGATTGGGTCTGATCCTGAGGGCAGACTAGG 779
||||||||||| | | ||||||||||||||||||||||||||||||||| ||||||||
Sbjct 420 AGTTATGATCC-TAAG--ATATTTCAATGTGATTGGGTCTGATCCTGAGGGTAGACTAGG 476
Query 780 TGAAGCTCCAAGACCTGAACTCAGAGAGCATGGACGAATCTCTGGTGCTTGCTTTGACGC 839
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||
Sbjct 477 TGAAGCTCCAAGACCTGAACTCAGTGAGCATGGACGGATCTCTGGTGCTTGCTTTGATGC 536
Query 840 TGCACGAGGCATCATTCCCGGGCTGCAGATTAAAGGAACAGACTACAAGACTGTTGATGG 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 537 TGCACGAGGCATCATTCCCGGGCTGCAGATTAAAGGAACAGACTACAAGACTGTTGATGG 596
Query 900 GACTTGTGTACGTGATTACATTGATGTCACCGACTTGGATGATGCTCATGTTAAAGCTCT 959
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 597 GACTTGTGTACGTGATTACATTGATGTCACCGACTTGGTTGATGCTCATGTTAAAGCTCT 656
Query 960 TGAAAAGGCGAAACCCCGCAAAGTTGGAATCTTTAATGTTGGTACCGGGAAAGGTAGCAC 1019
||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |
Sbjct 657 TGAAAAGGCGAAACCCCGCAAAGTTGGTATCTTCAATGTTGGTACCGGGAAAGGTAGCTC 716
Query 1020 GGTGAAGGAGTTTGTGGAAGCATGCAAAAAGGCGACTGGAGTTGATATAAAAGTTGATTA 1079
||||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||
Sbjct 717 GGTGAAGGAGTTTGTGGAAGCGTGCAAAAAGGCGACCGGCGTTGATATAAAAGTCGATTA 776
Query 1080 CTTAGAAAGACGGGCAGGAGATTATGCCGAGGTTTACAGCGACCCAAGTAAGATCAGAGA 1139
||| |||||||||||||||||||| || |||||||||||||| ||||| || |||| |||
Sbjct 777 CTTGGAAAGACGGGCAGGAGATTACGCAGAGGTTTACAGCGATCCAAGAAAAATCAAAGA 836
Query 1140 AGAGCTGAATTGGACAGCTAAGCACACAAATCTTCAAGAAAGTTTAAAGACAGCATGGAG 1199
||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct 837 AGAGCTGAATTGGACAGCTAAGCACACCAATCTTCAAGAAAGTTTAAAGATGGCATGGAG 896
Query 1200 ATGGCAAAAGCTTCATCACAATGGCTATGGATCTTCTTCCTTGGTTTCTGCATA 1253
||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 897 ATGGCAAAAGCTTCATCGCAGTGGCTATGGATCTTCTTCCTTGGTTTCTGCATA 950
> AT1G30620.1 | Symbols: HSR8, MUR4, UXE1 | NAD(P)-binding Rossmann-fold
superfamily protein | chr1:10854549-10858244 FORWARD
LENGTH=1925
Length=1925
Score = 1230 bits (666), Expect = 0.0
Identities = 1036/1214 (85%), Gaps = 27/1214 (2%)
Strand=Plus/Plus
Query 28 GGGAGGCAAAACAGATCTATGTCTTTTGAAGGATTGGATTTA-GCAGACCCAAAGAAGAA 86
|||||||||||||||||||||||| ||| |||| |||| ||| |||||||| ||||||||
Sbjct 422 GGGAGGCAAAACAGATCTATGTCTCTTGGAGGACTGGA-TTATGCAGACCCCAAGAAGAA 480
Query 87 CAACAATTACATGGGGAAGATTGTTTTGGTCATG--ACACTTACAGCAATGTGTATTCTC 144
||||||||| |||| |||||| |||| | || | | |||||||| |||| ||| ||
Sbjct 481 AAACAATTACTTGGGAAAGATTCTTTT-GACA-GCTTCTCTTACAGCCTTGTGCATTTTC 538
Query 145 TTGCTCAAGCAATCCCCAACCTTTAATACCCCGAGCGTGTTTTCTCGACATGAACCAGGA 204
||||||||||||| ||||| || ||||| || |||||||||||||||||||| |||||
Sbjct 539 ATGCTCAAGCAATCTCCAACATTCAATACTCCTAGCGTGTTTTCTCGACATGAGCCAGGG 598
Query 205 ATTACACATGTTCTAGTCACTGGTGGTGCAGGGTATATCGGGTCACACACAGCTTTACGT 264
||||||||||| | |||||||||||||| |||||||| || ||||| ||||| || |
Sbjct 599 GTTACACATGTTTTGGTCACTGGTGGTGCTGGGTATATTGGTTCACATGCAGCTCTAAGG 658
Query 265 CTTCTAAAAGATTCATACCGTGTCACCATTGTGGACAATCTATCTCGAGGG-AACCTCGG 323
|||||||| || ||||| || || |||||||||||||||||||| || ||| || ||||
Sbjct 659 CTTCTAAAGGAATCATATCGAGTAACCATTGTGGACAATCTATCACG-GGGCAATCTCGC 717
Query 324 TGCAATCAAGATTTTGCAACAACTGTTTCCGGAACCTGGAAGGCTTCAATTCATTTATGC 383
|||| ||| |||||||||| |||| |||||||||||||||||||||||||| ||||||||
Sbjct 718 TGCAGTCAGGATTTTGCAAGAACTATTTCCGGAACCTGGAAGGCTTCAATTTATTTATGC 777
Query 384 TGATCTTGGAGATGCAAAAGCTGTTAACAAAATATTTTCTGAAAACGCATTTGACGCTGT 443
||||||||||||||| |||||||| ||||| ||||| | || || || |||||||||||
Sbjct 778 TGATCTTGGAGATGCCAAAGCTGTCAACAAGATATTCACAGAGAATGCCTTTGACGCTGT 837
Query 444 GATGCATTTCGCGGCTGTTGCTTATGTTGGAGAAAGCACACAATTTCCTCTCAAGTATTA 503
|||||||||||| |||||||| |||||||| |||||||||||||| ||||| ||||||||
Sbjct 838 GATGCATTTCGCTGCTGTTGCATATGTTGGGGAAAGCACACAATTCCCTCTTAAGTATTA 897
Query 504 TCACAATATTACATCGAACACATTGGTAGTTTTAGAGACAATGGCTGCTTATGGTGTGAA 563
||||||||||||||||||||| |||||||| |||||||||||||||||| |||| || ||
Sbjct 898 TCACAATATTACATCGAACACTTTGGTAGTATTAGAGACAATGGCTGCTCATGGAGTAAA 957
Query 564 GACTTTGATATATTCAAGCACATGTGCTACTTATGGAGAGCCTGAGAAGATGCCAATAAC 623
||||||||||||||||||||| ||||| || ||||| |||||||| | |||||||| ||
Sbjct 958 GACTTTGATATATTCAAGCACTTGTGCAACGTATGGGGAGCCTGATATTATGCCAATTAC 1017
Query 624 AGAGGAAACTCCTCAGGTTCCAATCAATCCATATGGAAAGGCTAAGAAGATGGCAGAAGA 683
|||||||||||||||||| |||||||| |||||||| ||||| |||||||||||||||||
Sbjct 1018 AGAGGAAACTCCTCAGGTGCCAATCAACCCATATGGTAAGGCCAAGAAGATGGCAGAAGA 1077
Query 684 TATCATCTTAGATTTCTCCAAGAATTCTA-ATATGGCAGTTATGATCCGGAGGTTATATT 742
|||||| || |||||||| || || || | |||||||||||||||||| || |||||
Sbjct 1078 TATCATTTTGGATTTCTCGAAAAACTC-AGATATGGCAGTTATGATCCTAAG---ATATT 1133
Query 743 TCAATGTGATTGGGTCTGATCCTGAGGGCAGACTAGGTGAAGCTCCAAGACCTGAACT-C 801
|||||||||||||||| ||||| ||||||||| | |||||||| ||||||||||| || |
Sbjct 1134 TCAATGTGATTGGGTCCGATCCAGAGGGCAGATTGGGTGAAGCCCCAAGACCTGAGCTGC 1193
Query 802 AGAGAGCATGGACGAATCTCTGGTGCTTGCTTTGACGCTGCACGAGGCATCATTCCCGGG 861
||||||||||||| ||||| |||||||| ||||| || ||||| |||||||| || ||
Sbjct 1194 -GAGAGCATGGACGCATCTCCGGTGCTTGTTTTGATGCAGCACGTGGCATCATGCCTGGC 1252
Query 862 CTGCAGATTAAAGGAACAGACTACAAGACTGTTGATGGGACTTGTGTACGTGATTACATT 921
|| ||||| ||||||||||||||||| || | |||||| ||||| ||||| |||||||||
Sbjct 1253 CTACAGATCAAAGGAACAGACTACAAAACCGCTGATGGAACTTGCGTACGGGATTACATT 1312
Query 922 GATGTCACCGACTTGGATGATGCTCATGTTAAAGCTCTTGAAAAGGCGAAACCCCGCAAA 981
|||||||| || |||| |||||||||||||||||||||| ||||||| ||||| ||||||
Sbjct 1313 GATGTCACTGATTTGGTTGATGCTCATGTTAAAGCTCTTCAAAAGGCAAAACCACGCAAA 1372
Query 982 GTTGGAATCTTTAATGTTGGTACCGGGAAAGGTAGCACGGTGAAGGAGTTTGTGGAAGCA 1041
|||||||||| |||||||| ||||||||||||||| ||||||| |||||||| || ||
Sbjct 1373 GTTGGAATCTACAATGTTGGCACCGGGAAAGGTAGCTCGGTGAAAGAGTTTGTTGAGGCG 1432
Query 1042 TGCAA-AAAGGCGACTGGAGTTGATATAAAAGTT-GATTACTTAGAA-AGACGGGCAGGA 1098
||||| |||| | ||||| ||||| || || | | || || || | ||||| |||||
Sbjct 1433 TGCAAGAAAG-CAACTGGTGTTGAGATCAA-GATCGACTATTT-GCCTAGACGTGCAGGT 1489
Query 1099 GATTATGCCGAGGTTTACAGCGACCCAAGTAAGATCAGAGAAG-AGCTGAATTGGACAGC 1157
||||| || ||||||||||| || ||||| ||||| || |||| | || || ||||||||
Sbjct 1490 GATTACGCTGAGGTTTACAGTGATCCAAGCAAGATTAG-GAAGGAACTTAACTGGACAGC 1548
Query 1158 TAAGCACACAAATCTTCAA-GAAAGT-TTAAAGACAGCATGGAGATGGCAAAAGCTTCAT 1215
||||||||| ||||| ||| || ||| || | ||| |||||||||||||| ||||| ||
Sbjct 1549 TAAGCACACTAATCT-CAAAGAGAGTCTTGA-GACTGCATGGAGATGGCAGAAGCTGCAC 1606
Query 1216 CACAATGGCTATGG 1229
| |||||||||||
Sbjct 1607 CGTAATGGCTATGG 1620
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 61646269260
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5