BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg901331
Length=1782
Score E
Sequences producing significant alignments: (Bits) Value
AT2G34890.1 | Symbols: | CTP synthase family protein | chr2:14... 2760 0.0
AT1G30820.1 | Symbols: | CTP synthase family protein | chr1:10... 1467 0.0
> AT2G34890.1 | Symbols: | CTP synthase family protein | chr2:14718195-14721271
REVERSE LENGTH=1794
Length=1794
Score = 2760 bits (1494), Expect = 0.0
Identities = 1689/1783 (95%), Gaps = 14/1783 (1%)
Strand=Plus/Plus
Query 1 ATGAAGTACGTGCTTGTAACAGGAGGTGTTGTGAGTGGATTAGGGAAAGGAATCACTGCA 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAAGTACGTACTTGTAACAGGAGGTGTTGTGAGTGGATTAGGGAAAGGAATCACTGCA 60
Query 61 AGCAGTGTTGGTGTCCTTCTTCAATCTTGTGGTCTTCGCGTTACTTGTATCAAAATTGAT 120
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 61 AGCAGTGTTGGTGTCCTTCTTCAGTCTTGTGGTCTTCGCGTTACTTGTATCAAAATCGAT 120
Query 121 CCTTATCTGAATTACGATGCTGGAACCATATCTCCTTACGAACATGGTGAAGTGTTTGTC 180
|| ||| |||| || ||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 121 CCGTATTTGAACTATGATGCTGGAACCATATCCCCTTACGAACATGGAGAAGTGTTTGTC 180
Query 181 TTGGACGATGGTAGTGAGGTGGATCTTGATCTTGGAAACTACGAGAGGTTTCTAGATGTC 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 181 TTGGACGATGGTAGTGAGGTGGATCTTGATCTTGGAAACTACGAGAGGTTTCTAGAT-AC 239
Query 241 -ACATTAACTCGAGATAACAATATCACTTACGGGAAGATTCAGCAGTATGTGATCGAGAA 299
||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct 240 AACATTAACTCGAGATAACAATATCACTTACGGGAAGATTCAGCGGTATGTGATGGAGAA 299
Query 300 AGAGAGGAAAGGAGATTACTTAGGGGAAACTGTTCAGATTGTTCCTCACGTCACTGATAC 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 AGAGAGGAAAGGAGATTACTTAGGGGAAACTGTTCAGATTGTTCCTCACGTCACTGATAC 359
Query 360 AATCCGAGAATGGGTGGAGAAAGTTGCAATGATTCCTGTAGATGGAAAAGAAGGTCCTCC 419
|||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct 360 AATCCGAGAATGGGTGGAGAGAGTTGCAATGATTCCTGTCGATGGAAAAGAAGGTCCTCC 419
Query 420 TGATGTTTGCATCATTGAATTAGGTGGAACTATAGGAGATAATGAATCCAGGCCTTTTGC 479
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 420 TGATGTTTGCATCATTGAGTTAGGTGGAACTATAGGAGATAATGAATCCAGGCCTTTTGC 479
Query 480 TGACGCACTTAGCCAATTATCATACAGTGTAGGCCGTGAGAATTTCTGTCTGATCCATGT 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 TGACGCACTTAGCCAATTATCATACAGTGTAGGCCGTGAGAATTTCTGTCTGATCCATGT 539
Query 540 CACACTCGTGCCAGTGCTCAGTGTTGTTGGTGAACAGAAAACAAAACCAACACAGCACAG 599
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 CACCCTCGTGCCTGTGCTCAGTGTTGTTGGTGAACAGAAAACAAAACCAACACAGCACAG 599
Query 600 CATTAGAGATCTACGAGGCTTGGGTTTGACACCTAATATCATAGCTTGTCGGAGCACAGA 659
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct 600 TATTAAAGATCTACGAGGCTTTGGTTTGACACCTAATATCATAGCTTGTCGGAGCACAAA 659
Query 660 GGTACTTGAAGAGAATGTAAAAGCAAAGCTATCTCGGTTTTGCTATGTTCCGATTCAGAA 719
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 GGCACTTGAAGAGAATGTAAAAGCAAAGCTATCTCGGTTTTGCTATGTTCCGATTCAGAA 719
Query 720 CATCTTCTCTCTCTATGATGTTCACAGCATCTGGCACATTCCTTTGTTGCTCAGGGAACA 779
|||||||||||||| |||||||| || |||||||||||||||| ||||||||| ||| ||
Sbjct 720 CATCTTCTCTCTCTGTGATGTTCCCAACATCTGGCACATTCCTCTGTTGCTCAAGGAGCA 779
Query 780 GAAGGCTCATGAAGCAATATCAAAAGTCCTGAACCTTTCTGGTATTGCTAAAGAACCTTC 839
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 780 GAAGGCTCATGAAGCAATTTCAAAAGTCCTGAACCTTTCTGGTATTGCTAAAGAACCTTC 839
Query 840 TTTAGAGAAATGGGCTTCAATGGTAGAAATTAGTGACAGTTTAAATGTACCGGTGAGAAT 899
||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct 840 TTTAGAGAAATGGGCATCAATGGTAGAAATTAGTGACGGTTTAAATGTACCCGTGAGAAT 899
Query 900 CGCTATCGTGGGAAAATATACAGATCTCTCAGATGCCTATCTTTCTGTCTTGAAGGCTCT 959
|||||||||||| |||||||||||||| |||||||||||||| |||||||||||||| ||
Sbjct 900 CGCTATCGTGGGGAAATATACAGATCTATCAGATGCCTATCTCTCTGTCTTGAAGGCCCT 959
Query 960 CCTCCATGCTTCCGTGGCTTTTGGA-AAAAAGCTTGTAGTTGATATGGTTCCATCTTGTG 1018
|||||||||||| ||||||||| | |||||||||| |||||||||||||||||| ||||
Sbjct 960 CCTCCATGCTTCTGTGGCTTTTC-ACAAAAAGCTTGAAGTTGATATGGTTCCATCGTGTG 1018
Query 1019 ATCTCGAAAAGACCACCAAGAAAGAGAATTCACGCGCATACGAGGCTGCTTGGAAGTTAC 1078
||||||||||||||| ||| ||||| ||||||||||||| |||||||||||||||||||
Sbjct 1019 ATCTCGAAAAGACCAAGAAGCAAGAGGATTCACGCGCATATGAGGCTGCTTGGAAGTTAC 1078
Query 1079 TCAAGGACGCAGATGGAGTTCTTCTCCCTGGAGGGTTTGGTGATAGGGGAATAGAGGGGA 1138
| ||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 1079 TGAAGGACGCAAATGGAGTTCTTCTCCCTGGAGGGTTTGGTGATAGGGGAGTGGAGGGGA 1138
Query 1139 TGATTCTTGCAGCAAAATATGCCCGAGAAAACAGTATCCCTTTCCTCGGTATCTGTCTCG 1198
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1139 TGATTCTTGCAGCAAAATATGCCCGAGAAAACAATATCCCTTTCCTCGGTATCTGTCTCG 1198
Query 1199 GGATGCAGATCGCTGTTATCGAGTTTTCACGCTCACTTCTCTACTTGCCTGATGCAAATA 1258
|||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||
Sbjct 1199 GGATGCAGATCGCTGTCATCGAGTTTGCACGCTCACTTCTCTGCTTGCCTGATGCAAATA 1258
Query 1259 GCACAGAGTTTGAACCTGAAACCAAAAATCCATGCATCATATTCATGCCTGAGGGCTCCA 1318
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1259 GCACAGAGTTTGAACCTGAAACCAAACATCCATGCATCATATTCATGCCTGAGGGCTCCA 1318
Query 1319 CAACTCATATGGGAGGCACAATGAGATTAGGCTCGAGAAGAGCCTATTTCCATGTCAAAG 1378
|||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| |
Sbjct 1319 TAACTCATATGGGAGGCACAATGCGATTAGGTTCGAGAAGAGCCTATTTCCATGACAAGG 1378
Query 1379 ACAGCAAATCTGCAAGACTATATGGGAACAAAGAGTTTGTCGATGAAAGGCATCGCCATA 1438
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1379 AAAGCAAATCTGCAAGACTATATGGGAACAAAGAGTTTGTCGATGAAAGGCATCGCCATA 1438
Query 1439 GATATGAGGTGAATCCTGATATGGTTGCATGCCTCGAGA-AGGCGGGTCTCTCTTTTGCT 1497
||||||||||||||||||||||||||||| |||| || | |||| |||||||||||||||
Sbjct 1439 GATATGAGGTGAATCCTGATATGGTTGCAAGCCTTGA-ACAGGCTGGTCTCTCTTTTGCT 1497
Query 1498 GCAAAAGATGAAACTGGCGAGCGAACGGAGATTGTTGAAGTTCCAAGCCACCCTTTTTTC 1557
||||||||||||||||| ||||| | ||||||||||||| |||||||||||||||| |||
Sbjct 1498 GCAAAAGATGAAACTGGGGAGCGCATGGAGATTGTTGAACTTCCAAGCCACCCTTTCTTC 1557
Query 1558 ATCGGTGCTCAATTCCATCCCGAGTACAAGTCGAGACCCGGGAAAATATCTCCTCTGTTC 1617
|||||||||||||| |||||||||||||| ||||||||| ||||| ||||||||||||||
Sbjct 1558 ATCGGTGCTCAATTTCATCCCGAGTACAAATCGAGACCCAGGAAAGTATCTCCTCTGTTC 1617
Query 1618 TTAGGACTAATAGCAGCATCATGTGGTGAGCTAGATGCAGTCCTGAATCCAGTTTCCATT 1677
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1618 TTAGGACTAATAGCAGCATCCTGTGGTGAGCTAGATGCAGTCCTGAATCCAGTTTCCATT 1677
Query 1678 CACCAAGACAACCAAAACA-TGTACTTGGAAAAGAA-CAAAACAAAGGTCGGTCCAAAAA 1735
|||||| ||||||||| || ||| |||||||||||| ||| ||| |||| ||||||||||
Sbjct 1678 CACCAACACAACCAAA-CAATGTTCTTGGAAAAGAAACAACACATAGGTTGGTCCAAAAA 1736
Query 1736 AGTGTTTTGGTAATGAAA-CCAACAAGAA-A--TCTCAGAAAC 1774
| ||||||||| || ||| |||||||||| | ||||||||||
Sbjct 1737 A-TGTTTTGGTGATAAAAACCAACAAGAAGAAATCTCAGAAAC 1778
> AT1G30820.1 | Symbols: | CTP synthase family protein | chr1:10944913-10949458
REVERSE LENGTH=2480
Length=2480
Score = 1467 bits (794), Expect = 0.0
Identities = 1403/1696 (83%), Gaps = 46/1696 (3%)
Strand=Plus/Plus
Query 1 ATGAAGTACGTGCTTGTAACAGGAGGTGTTGTGAGTGGATTAGGGAAAGGAATCACTGCA 60
||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||
Sbjct 340 ATGAAGTACGTGCTTGTAACAGGAGGTGTTGTGAGTGGATTAGGGAAAGGAGTAACAGCA 399
Query 61 AGCAGTGTTGGTGTCCTTCTTCAATCTTGTGGTCTTCGCGTTACTTGTATCAAAATTGAT 120
|| ||| ||||||| || ||| || ||||||||||||| ||||||| ||||||||| |||
Sbjct 400 AGTAGTATTGGTGTTCTCCTTAAAGCTTGTGGTCTTCGAGTTACTTCTATCAAAATCGAT 459
Query 121 CCTTATCTGAATTAC-GATGCTGGAACCATATCTCC-TTACGAACATGGTGAAGTGTTTG 178
||||||||||| || ||||||||||| || ||||| || ||||| |||||||| ||||
Sbjct 460 CCTTATCTGAAC-ACTGATGCTGGAACTATGTCTCCATTT-GAACACGGTGAAGTTTTTG 517
Query 179 TCTTGGACGATGGTAGTGAGGTGGATCTTGATCTTGGAAACTACGAGAGGTTTCTAGATG 238
|||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 518 TCTTGGACGATGGTGGTGAGGTGGATCTTGATCTTGGAAACTACGAAAGGTTTCTAGATA 577
Query 239 TCACATTAACTCGAGATAACAATATCACTTAC-GGGAAGATTCAGCAGTATGTGATCGAG 297
||| |||||| |||| || || |||||| || ||||| ||| | ||| |||| || |
Sbjct 578 TCAAATTAACAAGAGACAATAACATCACT-ACTGGGAAAATTTATCAGCATGTTATTGCT 636
Query 298 AAAGAGAGGAAAGGAGATTACTTAGGGGAA-ACTGTTCAGATTGTTCCTCACGTCACTGA 356
|||||||||||||||||||| || ||| || ||||||||| |||||||||| ||||||||
Sbjct 637 AAAGAGAGGAAAGGAGATTATTT-GGGAAAGACTGTTCAGGTTGTTCCTCATGTCACTGA 695
Query 357 TACAATCCGAGAATGGGTGGAGAAAGTTGCAATGATTCCTGTAGATGGAAAAGAAGG-TC 415
| |||| | ||| ||| | |||| |||||| | |||||||| |||||| |||| || ||
Sbjct 696 TGCAATTCAAGATTGGATCGAGAGAGTTGCGGTTATTCCTGTTGATGGAGAAGA-GGATC 754
Query 416 CTCCTGATGTTTGCATCATTGAATTAGGTGGAACTATAGGAGATAATGAATCCAG-GCCT 474
|| ||||||||||| | ||||||||||||||||| ||||| |||| ||||||| | ||||
Sbjct 755 CTGCTGATGTTTGCGTTATTGAATTAGGTGGAACAATAGGTGATATTGAATCC-GCGCCT 813
Query 475 TTTG-CTGACGCACTTAGCCAATTATCATACAGTGTAGGCCGTGAGAATTTCTGTCTGAT 533
||| | || || ||| | ||||| || ||| ||||||||| | ||||||||||||| |
Sbjct 814 TTTATC-GAGGCGCTTGGTCAATTCTCTTACCGTGTAGGCCCAGGGAATTTCTGTCTGGT 872
Query 534 CCATGTCA-CACTCGTGCCAGTGCTCAGTGTTGTTGGTGAACAGAAAACAAAACCAACAC 592
|||||||| | |||||||| ||||| | ||||||||||||||||||||| || || ||||
Sbjct 873 CCATGTCAGC-CTCGTGCCTGTGCTTAATGTTGTTGGTGAACAGAAAACTAAGCCGACAC 931
Query 593 AGCACAGCATTA-GAGATCTACGAGGCTTGGGTTTGACACCTAATATCATAGCTTGTCGG 651
|||| || | | | | |||||||| ||||| ||||| || ||||| |||||||| ||
Sbjct 932 AGCATAGTGTCAAGGGG-CTACGAGGATTGGGCTTGACGCCGGATATCTTAGCTTGTAGG 990
Query 652 AGCACAGAGGTACTTGAAGAGAATGTAAAAGCAAAGCTATCTCGGTTTTGCTATGTTCCG 711
|||||| || ||||||||| ||||| |||| ||| ||| ||| ||||||| |||| |||
Sbjct 991 AGCACAAAGCCACTTGAAGATAATGTGAAAGAAAAACTAGCTCAGTTTTGCCATGTCCCG 1050
Query 712 ATTCAGAACATCTTCTCTCTCTATGATGTTCACAGCATCTGGCACATTCCTTTGTTGCTC 771
|| || | |||||| ||||||||||||||| || ||| |||| ||||||||||||||
Sbjct 1051 CTTGAGTATATCTTCACTCTCTATGATGTTCCCAACATTTGGCGTATTCCTTTGTTGCTA 1110
Query 772 AGGGAACAGAAGGCTCATGAAGCAATATCAAAAGTCCTGAACCTTTCTGGTATTGCTAAA 831
| ||| ||||| |||||| ||||| |||||||| || || ||| || ||||| || ||
Sbjct 1111 AAGGATCAGAAAGCTCATCTGGCAATCTCAAAAGTGCTCAATCTTGCTAGTATT-CTTAA 1169
Query 832 -GAACCTTCTTTAGAGAAATGGGCTTCAATG-G-TAGAAATTA-GTGACAGTTTAAATGT 887
|| |||||| ||| | ||||| |||| | | | | ||| ||| |||||| |||| ||||
Sbjct 1170 TGAGCCTTCTCTAGGGGAATGGACTTCCA-GAGCT-GAA-TTATGTGACAATTTACATGT 1226
Query 888 ACCGGTGAGAATCGCTATCGTGGGAAAATATACAGATCTCTCAGATGCCTATCTTTCTGT 947
||||||||||||||| | ||||| |||||||||| ||||| ||||| ||||| |||||
Sbjct 1227 GCCGGTGAGAATCGCTGTTGTGGGGAAATATACAGGCCTCTCTGATGCTTATCTCTCTGT 1286
Query 948 CTTGAAGGCTCTCCTCCATGCTTCCGTGGCTTTTGGAAAAAAGCTTGTAGTTGATATGG- 1006
||| ||||||||| | |||||||| ||||||| | | |||||||| ||||||||| |||
Sbjct 1287 CTTAAAGGCTCTCTTACATGCTTCTGTGGCTTGTCGCAAAAAGCTCGTAGTTGAT-TGGG 1345
Query 1007 TTCCATCTTGTGATCTCGAAAA-GACCACCAAGAAAGAGAATTCAC--GCGCATACGAGG 1063
||||| |||||||||||||||| || || ||||||||||| || ||| ||| ||
Sbjct 1346 TTCCAGCTTGTGATCTCGAAAAAGAA-ACTGAGAAAGAGAATCCAGATGCGTATAA-AG- 1402
Query 1064 CTGCTTGGAAGTTACTCAAGGACGCAGATGGAGTTCTTCTCCCTGGAGGGTTTGGTGATA 1123
||||||||||||| || |||| | ||||||| ||||| | |||||||| ||||||||||
Sbjct 1403 CTGCTTGGAAGTTGCTAAAGGGTGTAGATGGAATTCTTGTACCTGGAGGTTTTGGTGATA 1462
Query 1124 GGGGAATAGAGGGGATGATTCTTGCAGCAAAATATGCCCGAGAAAACAGTATCCCTTTCC 1183
| ||| | || |||| ||||||||| ||||| ||||| || ||||||| ||||| ||||
Sbjct 1463 GAGGAGTGGAAGGGAAGATTCTTGCTGCAAAGTATGCACGTGAAAACAAAATCCCGTTCC 1522
Query 1184 TCGGTATCTGTCTCGGGATGCAGATCGCTGTTATCGAGTTTTCACGCTCACTTCTCTA-C 1242
||||||| ||||| || |||||||| ||||| ||||||||| |||| ||| |||| | |
Sbjct 1523 TCGGTATTTGTCTTGGAATGCAGATTGCTGTCATCGAGTTTGCACGATCAGTTCTA-AGC 1581
Query 1243 TTGCCTGATGCAAATAGCACAGAGTTTGAACC-TGAAACCAAAAATCCATGCATCATATT 1301
|||| || ||||| |||||||| ||| |||| |||||||||| |||| |||||||| ||
Sbjct 1582 TTGCAAGACGCAAACAGCACAGAATTT-AACCCTGAAACCAAACATCCTTGCATCATTTT 1640
Query 1302 CATGCCTGAGGGCTCCACAACTCATATGGGAGGCACAATGAGATTAGGCTCGAGAAGAGC 1361
|||||| ||||| || | |||||||||||||||||| ||| | ||||| || |||| | |
Sbjct 1641 CATGCCCGAGGGTTCTAAAACTCATATGGGAGGCACTATGCGCTTAGGATCAAGAAAATC 1700
Query 1362 CTAT-TTCCATGTCAAAGACAGCAAATCTGCAAGACTATATGGGAACAAAGAG-TTTGTC 1419
| || ||| |||||||||||||||||||||||| |||||| | ||||||| || |||||
Sbjct 1701 C-ATCTTCAATGTCAAAGACAGCAAATCTGCAAAACTATACGAGAACAAA-AGCTTTGTA 1758
Query 1420 GATGAAAGGCATCGCCATAGATATGAGGTGAATCCTGATATGGTTGCATGCCTCGAGAAG 1479
||||| |||||||| || ||||| ||||||||||| || ||||||| | |||| ||||||
Sbjct 1759 GATGAGAGGCATCGTCACAGATACGAGGTGAATCCGGACATGGTTGAACGCCTTGAGAAG 1818
Query 1480 GCGGGTCTCTCTTTTGCTGCAAAAGATGAAACTGGCGAGCGAACGGAGATTGTTGAAGTT 1539
|| ||||| ||||| ||||| ||||||||||||||| | || | |||||| ||||| ||
Sbjct 1819 GCCGGTCTTTCTTTCGCTGCGAAAGATGAAACTGGCAAACGCATGGAGATCATTGAACTT 1878
Query 1540 CCAAGCCACCCTTT-TTTCATCGGTGCTCAATTCCATCCCGAGTACAAGTCGAGACCCGG 1598
|||| ||| ||||| ||| ||||||||||||||||| ||||||| ||| || ||||||||
Sbjct 1879 CCAAACCATCCTTTCTTT-ATCGGTGCTCAATTCCACCCCGAGTTCAAATCCAGACCCGG 1937
Query 1599 GAAAA-TATCTCCTCTGTTCTTAGGACTAATAGCAGCATCATGTGGTGAGCTAGATGCAG 1657
|||| | ||||||||||| ||||| || || |||||||| ||||| ||| |||| |||
Sbjct 1938 GAAAGCT-TCTCCTCTGTTTTTAGGGCTCATTGCAGCATCGTGTGGCGAGTTAGACACAG 1996
Query 1658 TCCTGAATCCAGTTTC 1673
|||||||||||| |||
Sbjct 1997 TCCTGAATCCAGCTTC 2012
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88152157020
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5