BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg901385
Length=1212
Score E
Sequences producing significant alignments: (Bits) Value
AT2G35390.2 | Symbols: | Phosphoribosyltransferase family prot... 1989 0.0
AT1G32380.1 | Symbols: PRS2 | phosphoribosyl pyrophosphate (PRP... 1282 0.0
> AT2G35390.2 | Symbols: | Phosphoribosyltransferase family protein
| chr2:14895279-14897822 REVERSE LENGTH=1702
Length=1702
Score = 1989 bits (1077), Expect = 0.0
Identities = 1167/1212 (96%), Gaps = 0/1212 (0%)
Strand=Plus/Plus
Query 1 ATGGCGTCTCTGGGTCTGTCGTTTCCTCCCGCCGCCAAAACGCCGTCGTATCTAGCCTCT 60
||||||||||||||||| || |||||||||||||| ||||||||| ||||||||||||||
Sbjct 242 ATGGCGTCTCTGGGTCTATCCTTTCCTCCCGCCGCAAAAACGCCGACGTATCTAGCCTCT 301
Query 61 TCGTCTTCAACTTTCTTCTCTAACTCTTCTCTATCCGTCAGAACCTCTCAGTATCGCTCC 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 302 TCGTCTTCAACTTTCTTCTCTAACTCTTCTCTATCCGTCAGAACCTCTCAGTTTCGCTCC 361
Query 121 CGAAACTCTGTCTTCGCTTCTGTTAAATGTGATATGCCGGAGTCATTGAATGTGGGAAAC 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 362 CGAAACTCTGTCTTCGCTTGTGTTAAATGTGATATGCCGGAGTCATTGAATGTGGGAAAC 421
Query 181 GGGAATCCGAGTATCCCAATTATTAATGAGAGGACACTTCCAAAGTTCTTGGAATCTGCT 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 422 GGGAATCCAAGTATCCCAATTATTAATGAGAGGACACTTCCAAAGTTCTTGGAATCTGCT 481
Query 241 CGAATGGAGAAATCAGTCAGTAGAACCAGTACCAGGTTGAAGTTGTTCTCTGGTACTGCA 300
|| |||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||
Sbjct 482 CGTATGGAGAAATCAGTCAATAGAACCAATACAAGGTTGAAGTTGTTCTCTGGTACTGCA 541
Query 301 AATCCAGCACTTGCTCAGGAAATTGCTTGGTATATGGGCTTGGAGCTTGGGAAGGTTAAT 360
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 542 AATCCAGCACTTGCTCAGGAAATTGCTTGGTATATGGGCTTGGATCTTGGCAAGGTTAAT 601
Query 361 ATTAAGAGATTTGCTGATGGAGAGATCTATGTTCAGCTACAAGAGAGCGTTAGGGGATGC 420
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 602 ATTAAGAGGTTTGCTGATGGAGAGATCTATGTTCAGCTACAAGAGAGCGTTAGGGGATGT 661
Query 421 GACGTCTATTTGGTGCAGCCTACTTGCACTCCCACTAATGAGAATCTCATGGAGCTTTTG 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 662 GACGTCTATTTGGTGCAGCCTACTTGCACTCCCACTAATGAGAATCTCATGGAGCTTTTG 721
Query 481 ATTATGGTAGATGCTTGCCGAAGAGCTTCAGCTAAGAAAGTAACAGCTGTTATTCCGTAT 540
|||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||
Sbjct 722 ATTATGGTAGATGCTTGCCGAAGAGCATCAGCTAAGAAAGTTACAGCTGTGATTCCGTAT 781
Query 541 TTTGGATATGCAAGAGCTGATAGGAAGACACAAGGGCGTGAATCCATTGCTGCCAAATTG 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 782 TTTGGATATGCAAGAGCTGACAGGAAGACACAAGGGCGTGAATCCATTGCTGCCAAATTG 841
Query 601 GTTGCTAATCTGATCACTGAAGCCGGTGCAGATCGAGTTCTTGCATGTGATCTTCATTCT 660
||||| ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 842 GTTGCAAATCTTATCACTGAAGCTGGTGCAGATCGAGTTCTTGCTTGTGATCTTCATTCA 901
Query 661 GGACAGTCCATGGGTTATTTTGACATTCCAGTCGACCATGTGTACTGCCAGCCGGTGATA 720
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 902 GGACAGTCGATGGGTTATTTTGACATTCCAGTCGACCATGTGTACTGCCAGCCGGTGATA 961
Query 721 CTTGATTATCTTGCTAGCAAGTCAATTTCCTCAGAGGACTTGGTCGTGGTTTCTCCTGAT 780
||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||
Sbjct 962 CTTGATTATCTTGCTAGCAAGTCAATTCCCTCAGAGGATTTGGTAGTGGTTTCTCCTGAT 1021
Query 781 GTTGGTGGAGTAGCCAGGGCACGTGCTTTTGCAAAGAAATTATCAGATGCGCCACTTGCC 840
|||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||
Sbjct 1022 GTTGGTGGAGTAGCCAGGGCCCGCGCTTTTGCAAAGAAATTATCAGATGCACCACTTGCC 1081
Query 841 ATTGTCGATAAAAGGCGTTCAGGACACAATGTTGCTGAGGTCATGAACCTAATTGGTGAT 900
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1082 ATTGTCGATAAAAGGCGTTCTGGACACAATGTTGCTGAGGTCATGAACCTAATTGGTGAT 1141
Query 901 GTAAAAGGGAAGGTGGCAGTAATGGTGGATGATATGATTGATACCGCTGGAACCATTGTA 960
|||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct 1142 GTAAGAGGGAAGGTGGCAATAATGGTGGATGATATGATTGATACTGCTGGAACCATTGTA 1201
Query 961 AAAGGAGCAGCTTTGTTACACCAGGAAGGTGCTAGGGAGGTCTATGCGTGCTGCACACAT 1020
||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct 1202 AAAGGAGCAGCTTTGTTACACCAGGAAGGTGCTCGGGAGGTATATGCGTGCTGCACACAC 1261
Query 1021 GCTGTTTTCAGCCCGCCAGCGATAGAACGATTATCAGGGGGTTTGCTTCAAGAAGTGATA 1080
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct 1262 GCTGTTTTCAGCCCGCCAGCGATAGAGCGATTATCAGGGGGTTTGCTGCAAGAAGTGATA 1321
Query 1081 GTGACAAACACATTACCAGTAGCAGAAAAGAATTACTTCCCGCAGTTAACAATATTATCG 1140
||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 1322 GTGACAAACACATTACCTGTAGCAGAGAAGAATTACTTCCCGCAGTTAACAATATTATCA 1381
Query 1141 GTGGCTAATCTTCTGGGTGAGACCATTTGGCGTGTCCATGATGATAGTTCCGTCAGTAGC 1200
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1382 GTGGCTAATCTCCTGGGTGAGACCATTTGGCGTGTGCATGATGATAGTTCCGTCAGTAGC 1441
Query 1201 ATTTTCCTTTGA 1212
||||||||||||
Sbjct 1442 ATTTTCCTTTGA 1453
> AT1G32380.1 | Symbols: PRS2 | phosphoribosyl pyrophosphate (PRPP)
synthase 2 | chr1:11681752-11684478 FORWARD LENGTH=1733
Length=1733
Score = 1282 bits (694), Expect = 0.0
Identities = 929/1043 (89%), Gaps = 14/1043 (1%)
Strand=Plus/Plus
Query 177 AAACGGGAATC-CGAGTATCCCAATTATTAATGAGAGGACACTTCCAAAGTTCTTGGAAT 235
||||||||| | | || | |||||||||||||||| |||| |||| |||||||| || |
Sbjct 449 AAACGGGAA-CGCTCGTGTTCCAATTATTAATGAGACGACAATTCCTAAGTTCTTTGATT 507
Query 236 CTGCTCGAATGGAGAAATCAGTCAGTAGAACCAGTACCAGGTTGAAGTTGTTCTCTGGTA 295
|| | || |||||||||| || ||||||| || ||| | | | ||||||||||||||||
Sbjct 508 CTTCACGGTTGGAGAAATCGGTTAGTAGAAACAATACTAAGCTCAAGTTGTTCTCTGGTA 567
Query 296 CTGCAAATCCAGCACTT-GCTCAGGAAATTGCTTGGTATATGGGCT-TGGAGCTTGGGAA 353
|||| |||||||| || ||||||||||||||||||||||||| | |||||||||||||
Sbjct 568 CTGCTAATCCAGC-TTTATCTCAGGAAATTGCTTGGTATATGGG-TCTGGAGCTTGGGAA 625
Query 354 GGTTAATATTAAGAGATTTGCTGATGGAGAGATCTATGTTCAGCTAC-AAGAGAGCGTTA 412
||||| || ||||||||||||||||||||||||||||||||||| | |||| || ||||
Sbjct 626 GGTTAGCATAAAGAGATTTGCTGATGGAGAGATCTATGTTCAGCT-CAAAGAAAGTGTTA 684
Query 413 GGGGATGCGACGTCTATTTGGTGCAGCCTACTTGCACTCCCACTAATGAGAATCTCATGG 472
| || ||||| |||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct 685 GAGGTTGCGATGTCTTTTTGGTGCAGCCTACTTGCACTCCAACTAATGAGAATCTCATGG 744
Query 473 AGCTTTTGATTATGGTAGATGCTTGCCGAAGAGCTTCAGCTAAGAAAGTAACAGCTGTTA 532
|||| ||||| ||||| ||||||||||||||||| |||||||||||||| |||||||| |
Sbjct 745 AGCTATTGATCATGGTGGATGCTTGCCGAAGAGCATCAGCTAAGAAAGTCACAGCTGTGA 804
Query 533 TTCCGTATTTTGGATATGCAAGAGCTGATAGGAAGACACAAGGGCGTGAATCCATTGCTG 592
|||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||
Sbjct 805 TTCCGTATTTTGGATACGCAAGAGCTGATAGAAAGACACAAGGGCGTGAATCTATTGCTG 864
Query 593 CCAAATTGGTTGCTAATCTGATCACTGAAGCCGGTGCAGATCGAGTTCTTGCATGTGATC 652
|||||||||| || || || || || ||||||||||||||| | ||||| || |||||||
Sbjct 865 CCAAATTGGTAGCAAACCTTATAACAGAAGCCGGTGCAGATAGGGTTCTGGCTTGTGATC 924
Query 653 TTCATTCTGGACAGTCCATGGGTTATTTTGACATTCCAGTCGACCATGTGTACTGCCAGC 712
||||||| ||||| |||||||||||||||||||| ||||| || ||||| || |||||||
Sbjct 925 TTCATTCAGGACAATCCATGGGTTATTTTGACATACCAGTGGATCATGTCTATTGCCAGC 984
Query 713 CGGTGATACTTGATTATCTTGCTAGCAAGTCAATTTCCTCAGAGGACTTGGTCGTGGTTT 772
| |||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||
Sbjct 985 CTGTGATACTTGATTATCTTGCTAGCAAGTCAATTTCCTCTGAGGATTTGGTAGTGGTTT 1044
Query 773 CTCCTGATGTTGGTGGAGTAGCCAGGGCACGTGCTTTTGCAAAGAAATTATCAGATGCGC 832
|||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| |
Sbjct 1045 CTCCTGATGTTGGTGGAGTAGCCAGGGCACGTGCATTTGCTAAGAAATTATCTGATGCAC 1104
Query 833 CACTTGCCATTGTCGATAAAAGGCGTTCA-GGACACAATGTTGCTGAGGTCATGAACCTA 891
||||||||||||||||||||||||| ||| || |||||||| ||||||||||||||||||
Sbjct 1105 CACTTGCCATTGTCGATAAAAGGCG-TCACGGCCACAATGTCGCTGAGGTCATGAACCTA 1163
Query 892 ATTGGTGATGTAAAAGGGAAGGTGGCAGTAATGGTGGATGATATGATTGATACCGCTGGA 951
|| |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct 1164 ATCGGTGATGTTAAAGGGAAGGTGGCAGTAATGGTGGATGATATTATTGATACAGCTGGA 1223
Query 952 ACCATTGTAAAAGGAGCAGCT-TTGTTACACCAGGAAGGTGCTA-GGGAGGTCTATGCGT 1009
|||||||| |||||||||||| || |||||| |||| ||||| | | ||||| || || |
Sbjct 1224 ACCATTGTGAAAGGAGCAGCTCTT-TTACACGAGGAGGGTGC-ACGTGAGGTTTACGCTT 1281
Query 1010 GCTGCACACATGCTGTTTTCAGCCCGCCAGCGATAGAACGATTATCAGGGGGTTTGCTTC 1069
|||| ||||| ||||||||||| || || |||||||| || |||||| | |||||||| |
Sbjct 1282 GCTGTACACACGCTGTTTTCAGTCCTCCTGCGATAGAGCGGTTATCAAGCGGTTTGCTGC 1341
Query 1070 AAGAAGTGATAGTGACAAACACATTACCAGTAGCAGAAAAGAATTACTTCCCGCAGTTAA 1129
|||||||||||||||| || || ||||||||||| || ||||||||||||||||||||||
Sbjct 1342 AAGAAGTGATAGTGACGAATACTTTACCAGTAGCGGAGAAGAATTACTTCCCGCAGTTAA 1401
Query 1130 CAATATTATCGGTGGCTAATCTTCTGGGTGAGACCATTTGGCGTGTCCATGATGATAGTT 1189
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1402 CGATATTATCGGTGGCTAATCTTCTGGGTGAGACCATTTGGCGTGTCCATGATGATAGCT 1461
Query 1190 CCGTCAGTAGCATTTTCCTTTGA 1212
|||| ||||| ||||||||||||
Sbjct 1462 CCGTTAGTAGTATTTTCCTTTGA 1484
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 59537846370
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5