BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg901607 Length=780 Score E Sequences producing significant alignments: (Bits) Value AT2G37390.1 | Symbols: NAKR2 | Chloroplast-targeted copper chap... 1127 0.0 AT3G53530.2 | Symbols: NAKR3 | Chloroplast-targeted copper chap... 200 2e-50 > AT2G37390.1 | Symbols: NAKR2 | Chloroplast-targeted copper chaperone protein | chr2:15694215-15695825 FORWARD LENGTH=1229 Length=1229 Score = 1127 bits (610), Expect = 0.0 Identities = 727/783 (93%), Gaps = 10/783 (1%) Strand=Plus/Plus Query 1 ATGAAGGGACGTATGTTTTGCGCTTCGCAAGCATCAACAGCCATATGTTCAAGCATGGAC 60 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 86 ATGAAGGGACGAATGTTTTGCGCTTCGCAAGCATCGACAGCCATATGTTCAAGCATGGAC 145 Query 61 CACGTTCACAAATCAACCACCACCGAAGAAGATGAACGAAGTAGCGGCCGAGCTATAGAC 120 |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct 146 CACGTTCACAAATCAACCACCACCGACGAAGATGAACGAAACAGCGGCCGAGCTATAGAC 205 Query 121 CGCCACAATCCGATCATTAAAGATGGCCGAAGATCATTCGCCGAGGACTTCATCAAACTA 180 |||||||| |||||||||||||||||||||||||||||||| || |||||||| |||||| Sbjct 206 CGCCACAACCCGATCATTAAAGATGGCCGAAGATCATTCGCTGACGACTTCATTAAACTA 265 Query 181 CCAGCTTCCGCCGAAGACGGAGAGATGAGTAACAAAAAACTAGAGATCTATAAAGGCAGG 240 ||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 266 CCAACTTCCGCAGAAGACGGAGAGATGAGTAACAAAAAGCTAGAGATCTATAAAGGCAGG 325 Query 241 AGAAGCATTACTGGCCGGAGAAGCACGGGTGGTGGCGGGGGAGGCGGAGCAGCGGCGTTG 300 |||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||||| Sbjct 326 AGAAGCATCACTGGCAGGAGAAGCACGGGCGGTGGCGGTGGAGGCGGAGCAGCGGCGTTG 385 Query 301 TTGAAGCTTATTACCAATGACATTGGCCTAGCGAGGAAGAGTTTCAGCTGTGTTGCTAGA 360 |||||||| || || |||||||||||| |||| ||||||||||||||||||||||| ||| Sbjct 386 TTGAAGCTGATCACTAATGACATTGGCTTAGCAAGGAAGAGTTTCAGCTGTGTTGCGAGA 445 Query 361 CCCGCTTGTGACTTAATCAAAACCCATGTGGGTTCTACAAGGTATCTTTTGGGATCGGAC 420 ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 446 CCCGCATGTGACTTAATCAAAACCCCTGTGGGTTCTACAAGGTATCTTTTGGGATCGGAC 505 Query 421 CCGGATTCTATTTCTGGG-TCTCCGGGTCAGGTTCCGGCTATGACGGTAGAAGCTGAAGC 479 |||||||||||| | ||| ||| || ||||| |||||||| |||||||||||||||||| Sbjct 506 CCGGATTCTATTAC-GGGTTCTGTGGATCAGGATCCGGCTAAGACGGTAGAAGCTGAAGC 564 Query 480 TCCTGCTGGTGAAGGCATAACGTTGAC-G-G-AGAAGA-ATACTTGTGTTGGTAGTTCGG 535 |||||||||||||| || ||||||||| | | |||||| | ||||||| | | | | | | Sbjct 565 TCCTGCTGGTGAAGACAAAACGTTGACAGAGAAGAAGACA-ACTTGTGGT-G-A-TACAG 620 Query 536 ACCAGCAGGTCGTTGTTCTTAAAGTGTCTCTCCACTGCAGAGGCTGTGAAGGCAAAGTTA 595 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 621 ACCAGCAGGTCGTTGTTCTTAAAGTGTCTCTCCACTGCAGAGGCTGTGAAGGCAAAGTTA 680 Query 596 GGAAACACTTGGCCAGAATGCAAGGTGTGACATCCTTCAACATAGATTTTGCTGCAAAGA 655 |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct 681 GGAAACACTTGGCCAGAATGCAAGGTGTAACATCTTTCAACATAGATTTTGCTGCAAAGA 740 Query 656 AGGTAACTGTGACTGGAGATATCACTCCCTTGGAAATATTGGAAAGTATCTCAAAGGTTA 715 | || |||||||||||||||||||||||||||||||||||||| || || |||||||||| Sbjct 741 AAGTGACTGTGACTGGAGATATCACTCCCTTGGAAATATTGGATAGCATTTCAAAGGTTA 800 Query 716 AAAATGCCCAATTTTGGACAACTCCAACATTCCCAAAGCCAAACGTGGAAACCCAAAATC 775 ||||||||||||||||||||| ||||||| |||||||||| ||||||||||| ||||||| Sbjct 801 AAAATGCCCAATTTTGGACAAATCCAACAATCCCAAAGCCGAACGTGGAAACACAAAATC 860 Query 776 CCT 778 ||| Sbjct 861 CCT 863 > AT3G53530.2 | Symbols: NAKR3 | Chloroplast-targeted copper chaperone protein | chr3:19845097-19846820 FORWARD LENGTH=1086 Length=1086 Score = 200 bits (108), Expect = 2e-50 Identities = 207/251 (82%), Gaps = 21/251 (8%) Strand=Plus/Plus Query 541 CAGGTCGTTGTTCTTAAAGTGTCTCT---C---CACTGCAGAGGCTGTGAAGGCAAAGTT 594 ||||| |||||||||| ||||||||| | ||||||||||||||| |||||||||| Sbjct 604 CAGGTAGTTGTTCTTAGAGTGTCTCTCCACTGTCACTGCAGAGGCTGTCAAGGCAAAGTG 663 Query 595 AGGAAACACT-TGGCCAGAATGC-A--AGGTGTGACATCCTTCAACATAGATTTTGC-TG 649 | |||||| | | ||| ||||| | |||||||||||||||||||||||||||||| | Sbjct 664 AAGAAACA-TCTATCCAAAATGCAAGTAGGTGTGACATCCTTCAACATAGATTTTGCAT- 721 Query 650 CAAAGAAGGTAACTGTGACTGGAGATATCACTCCCTTGGAAATATTGGAAAGTATCTCAA 709 ||||||||||||||||||||||||| |||||||| |||||| |||||| | |||||| Sbjct 722 CAAAGAAGGTAACTGTGACTGGAGACATCACTCCTTTGGAAGTATTGGGTTGCCTCTCAA 781 Query 710 AGGTTAAAAATGCCCAATTTTGGACA--AC-TCCAACAT---TCCCAAAGCCAAA-CGTG 762 |||| |||||||||||||| |||||| || |||| ||| |||||| | |||| | | Sbjct 782 AGGTCAAAAATGCCCAATTCTGGACACCACCTCCACCATCAATCCCAAGGGCAAATCC-G 840 Query 763 GAAACCCAAAA 773 |||||| |||| Sbjct 841 GAAACCTAAAA 851 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 37926780985 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5