BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg901622 Length=462 Score E Sequences producing significant alignments: (Bits) Value AT4G23500.1 | Symbols: | Pectin lyase-like superfamily protein... 726 0.0 > AT4G23500.1 | Symbols: | Pectin lyase-like superfamily protein | chr4:12264590-12267196 FORWARD LENGTH=1660 Length=1660 Score = 726 bits (393), Expect = 0.0 Identities = 441/464 (95%), Gaps = 4/464 (1%) Strand=Plus/Plus Query 1 ATTAAAACAGCTATTGGACGAGGAGGATACGTGAAAGATGTATATGTAAGAGGAATGACA 60 |||||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct 1077 ATTAAAACAGCTATCGGACGAGGAGGTTACGTGAAGGATGTATACGTAAGAGGAATGACA 1136 Query 61 ATGAAT-ACGATGAAATATGTGTTTTGGATGACCGGAAGTTACGGTTCTCATCCTGACGA 119 ||| || || |||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct 1137 ATG-ATGACAATGAAATATGTGTTTTGGATGACCGGAAGTTACGGTTCGCATCCGGACGA 1195 Query 120 GCATTATGATCCGAAAGCGTTACCGGTGATTCAGAACATTAATTATCAAGACATGGTCGC 179 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1196 TCATTATGATCCGAAAGCGTTACCGGTGATTCAGAACATTAATTATCAAGACATGGTCGC 1255 Query 180 CGAGAATGTGACGATGCCTGCTCAGTTGGCTGGAATATCGGGAGATCAGTTTACTGGAAT 239 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1256 CGAGAACGTGACGATGCCTGCTCAGTTAGCTGGAATATCGGGAGATCAGTTTACTGGAAT 1315 Query 240 CTGTATCTCTAACGTGACGATCACTCTTTCGAAGAAACCTAAGAAAGTGCTTTGGAATTG 299 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct 1316 TTGTATCTCTAACGTGACTATCACTCTATCGAAGAAACCTAAGAAAGTGCTTTGGAATTG 1375 Query 300 TACGGATGTTTCGGGTTATACAAGTGGTGTGACTCCGCAGCCGTGTCAGCTT-TTGCCGG 358 ||| ||||||||||||||||| ||||||||||||||||||||||||||| || || |||| Sbjct 1376 TACTGATGTTTCGGGTTATACTAGTGGTGTGACTCCGCAGCCGTGTCAG-TTGTTACCGG 1434 Query 359 AGAAGCAGCCGGGGGCAATTGTGCCGTGTAATTTCCCGGAAGATCCGATTCCTATTGATG 418 |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct 1435 AGAAGCAGCCGGGGACGGTTGTGCCGTGTAATTTCCCGGAAGATCCGATTCCTATTGATG 1494 Query 419 AAGTGAAGCTTCAACGTTGCTACTCCAGAAGAAGGAATATGTGA 462 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1495 AAGTGAAGCTTCAACGTTGCTACTCCAGAAGAAGGAATATGTGA 1538 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 22017274062 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5