BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg901763
Length=1578
Score E
Sequences producing significant alignments: (Bits) Value
AT2G38460.1 | Symbols: ATIREG1, IREG1, FPN1 | iron regulated 1 ... 2462 0.0
AT5G03570.1 | Symbols: ATIREG2, FPN2, IREG2 | iron regulated 2 ... 1079 0.0
> AT2G38460.1 | Symbols: ATIREG1, IREG1, FPN1 | iron regulated
1 | chr2:16103311-16106177 FORWARD LENGTH=1877
Length=1877
Score = 2462 bits (1333), Expect = 0.0
Identities = 1502/1583 (95%), Gaps = 13/1583 (1%)
Strand=Plus/Plus
Query 1 ATGGAGAATGAGACAGAATTGAGGGATGTTCATcaagaagaagaacaacaacaacgtgaa 60
||||||||||||||||||||||||| |||||||| || |||| |||||||||| |||
Sbjct 56 ATGGAGAATGAGACAGAATTGAGGGTTGTTCATC-AG--GAAG---AACAACAACGCGAA 109
Query 61 gaaggagaagaagaagCACAGCCACAAAACCCACCA-C--CCTTACGACGTCGTTTCGTG 117
||||||||||| ||| |||||||||||||||||||| | ||||||||||||||||||||
Sbjct 110 GAAGGAGAAGATGAATCACAGCCACAAAACCCACCACCAGCCTTACGACGTCGTTTCGTG 169
Query 118 ATATATCTTTACGTTGGATATTTTCTTGCAAGATGGAGTGCCAGAACATGGGAATTCTCT 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 170 ATATATCTTTACGTTGGATATTTTCTTGCAAGATGGAGTGCCAGAACATGGGAATTCTCT 229
Query 178 GTTGCTTTGTATATGATCCACTGGTGGCCAAACTCTCTGCTTCTAGCCGCGATTTATGGT 237
||||| |||||||||||||||| ||||||||||||||||||||| || || |||||||||
Sbjct 230 GTTGCATTGTATATGATCCACTTGTGGCCAAACTCTCTGCTTCTCGCTGCCATTTATGGT 289
Query 238 GCTATAGAATCTGGTTCTACTGCAATTTTTGGTCCCATTGTGGGGCAATGGGTCGAGGGA 297
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 290 GCTATAGAATCTGGTTCTACTGCAATCTTTGGTCCCATTGTGGGGCAATGGGTCGAGGGA 349
Query 298 ATGGACTATGTTAAAGTTCTCAGACTCTGGCTCCTGTTCCAGAACCTCTCCTACACTATT 357
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 350 ATGGACTACGTTAAAGTTCTTAGACTCTGGCTCCTGTTCCAGAACCTCTCCTACACTATT 409
Query 358 GCTGGTGGTGCAGTCATCAAGTTGTTGCTAGTTTCCGATCTTAAGTCCCGGAATCTCGCG 417
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct 410 GCTGGTGGTGCAGTCATCAAGTTGTTGCTAGTTTCTGATCTTAAGTCCCGGAATCTCCCG 469
Query 418 GTGTTTGCAATCTTGGTTGTGTTAACGAATGTTGCTGGCGCCATTGGAGTTCTTTCGACT 477
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 470 GTGTTTGCAATCTTGATTGTGTTAACGAATCTTGCTGGCGCCATTGGAGTTCTTTCGACT 529
Query 478 CTTGCTGGCACCATTCTGATCGAACGAGACTGGGCTGTGGTTATGTCAGAAGGTCATCCA 537
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 530 CTTGCTGGCACCATTCTGATCGAACGAGACTGGGCTGTGGTTATGTCTGAAGGTCATCCA 589
Query 538 CCAGCAGTATTGACAAGAATGAATTCTGTCATTAGGGGCATTGATTTGAGCTCCAAGTTA 597
|||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||
Sbjct 590 CCAGCAGTATTGACAAAAATGAATTCTGTCATTAGAGGCATTGATTTGAGCTCCAAGCTA 649
Query 598 TTTTCTCCAGTCATCACTGGTCTGATCATCAGTTTTGTCTCACTTAAGGCGTCAGCGATA 657
| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 650 CTGTCTCCAGTCATTACTGGTCTGATCATCAGTTTTGTCTCACTTAAGGCTTCAGCGATC 709
Query 658 ACTTTTGCAGCTTGGGCCACTATAACAGCTTGGGTTGAATATTGGCTCTTCATTTCAGTT 717
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 710 ACTTTTGCAGCTTGGGCTACTATAACAGCTTGGGTTGAATATTGGCTCTTCATTTCTGTG 769
Query 718 TATAGTGGTGTTCCTGCGATAGCACGAAGCAATGAGAGACGGATCTTGCGTTCCCGGACA 777
||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 770 TATAGCGGTGTTCCTGCAATAACACGAAGCAATGAGAGACGGATCTTGCGTTCCCGGACA 829
Query 778 AAGCAAGTAGAAGGAACAGATGCACCTGTTTCTGTATCTAATGCTCCGGGAACAGAGGAG 837
|||||||||||||||| |||||||||||||||||| |||| || ||||||||||||||||
Sbjct 830 AAGCAAGTAGAAGGAAGAGATGCACCTGTTTCTGTTTCTATTGTTCCGGGAACAGAGGAG 889
Query 838 AGTTCTACTGGAACCCCACCGTGTAGAACCGGAATC-CGGAAGATTCTTAATAGAGTATC 896
||| |||||||| ||| |||| ||||||||||||| || ||| || ||||| | ||
Sbjct 890 GGTTATACTGGAAACCCTCCGTCTAGAACCGGAATCTTGG-TGATACTGGATAGAATGTC 948
Query 897 CAAGTCCTCTTTTGTTGGCGCATGGAGAATATATTTCAATCAAGAAGTTGTACTCCCCGG 956
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 949 CAAGTCCTCTTTTGTTGGCGCATGGAGAATTTATTTCAATCAAGAAGTTGTCCTCCCCGG 1008
Query 957 GGTTTCTCTAGCTCTCTTGTTCTTCACCGTCCTCAGCTTTGGAACATTGATGACGGCTAC 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1009 GGTTTCTCTAGCTCTCTTGTTCTTCACCGTCCTCAGCTTTGGAACATTGATGACGGCTAC 1068
Query 1017 ATTGCAGTGGGAAGGGATACCTACATATATCATCGGTATAGGCAGGGGAATAAGTGCAAC 1076
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1069 ATTGCAGTGGGAAGGTATACCTACATATATCATCGGTATAGGCAGGGGAATAAGTGCAAC 1128
Query 1077 GGTTGGACTAACGGCTACATTAGTGTATCCGCTAATGCAATCCCGTCTGTCAACGCTGAG 1136
|||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct 1129 GGTTGGACTAGCGGCTACATTAGTGTATCCGCTAATGCAATCGCGTCTCTCAACTCTGAG 1188
Query 1137 AACCGGTCTCTGGTCCTTCTGGTCTCAGTGGAGCTGCCTTTTGGTCTGCGTTGGATCGAT 1196
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1189 AACCGGCCTCTGGTCCTTCTGGTCTCAGTGGAGCTGCCTTTTGGTCTGCGTTGGATCGAT 1248
Query 1197 ATGGGTTAAAAAGGATAAAATAGCATCTTACATGCTAATGGCTGGAGTTGCTGCTTCAAG 1256
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1249 TTGGGTTAAAAAGGATAAAATAGCATCTTACATGCTAATGGCTGGAGTTGCTGCTTCAAG 1308
Query 1257 GCTTGGCTTGTGGATGTTTGATCTTTCCGTCATCCAACAAATGCAGGATCTTGTTTCAGA 1316
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1309 GCTTGGCTTGTGGATGTTTGATCTTGCCGTCATCCAACAAATGCAGGATCTTGTTTCAGA 1368
Query 1317 ATCCGACCGTTGTGTGGTTGGAGGTGTTCAGAACTCACTGCAATCGGCTCTTGACTTGAT 1376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1369 ATCCGACCGTTGTGTGGTTGGAGGTGTTCAGAACTCACTGCAATCGGCTCTTGACTTGAT 1428
Query 1377 GGCATATCTATTAGGTATCATTGTCTCCAATCCAAAGGATTTCTGGATATTGACGTTGAT 1436
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1429 GGCATATCTTTTAGGTATCATTGTCTCCAATCCAAAGGATTTTTGGATATTGACGTTGAT 1488
Query 1437 CTCATTCTCCACTGTGTCGTTAGCAGGAATGCTCTATACAATTCATCTCTACCGGATTAG 1496
|||||||||||| || ||||| ||||||||||||||||||||||| |||||||| || ||
Sbjct 1489 CTCATTCTCCACAGTATCGTTGGCAGGAATGCTCTATACAATTCACCTCTACCGCATAAG 1548
Query 1497 AAACCACATTTTTCA-CTTTGAGAAGATTCCTTTGTTGAACAAATGTTTATTCAAGTTGC 1555
|||||| |||||||| ||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct 1549 AAACCATATTTTTCATCTT-GAGAAGATTCCTTTGTTGAACAAATGTATATTCAAGTTGC 1607
Query 1556 TCCCTTCTCGTGGAAACATGTAA 1578
||||||||||||||||| |||||
Sbjct 1608 TCCCTTCTCGTGGAAACGTGTAA 1630
> AT5G03570.1 | Symbols: ATIREG2, FPN2, IREG2 | iron regulated
2 | chr5:903756-906664 FORWARD LENGTH=1673
Length=1673
Score = 1079 bits (584), Expect = 0.0
Identities = 1165/1438 (81%), Gaps = 70/1438 (5%)
Strand=Plus/Plus
Query 136 TATTTTCTTGCAAGATGGAGTGCCAGAACATGGGAATTCTCTGTTGCTTTGTATATGATC 195
||||||||||| ||||| |||| ||||| |||||||||||||||||| ||||||||||
Sbjct 184 TATTTTCTTGCTCGATGGGGTGCAAGAACTTGGGAATTCTCTGTTGCTCTGTATATGATT 243
Query 196 CA-CTGGTGGCCAAACTCTCTGCTTCT-AGCCGCGATTTATGGTGCTATAGAATCTGGTT 253
| || ||||||||||||||| |||| | | ||||| || |||| | ||||||| ||||
Sbjct 244 TACCT-CTGGCCAAACTCTCTGTTTCTCA-CTGCGATGTACGGTGTTGTAGAATCCGGTT 301
Query 254 CTACTG-CAAT-TTTT-GGTCCCATTGTGGGGC-AATGGGTCGAGGGAATGGA-CTATGT 308
| | | || | |||| ||||||||||| || | ||| | | || ||||| || ||||||
Sbjct 302 C--C-GCCACTCTTTTCGGTCCCATTGTAGGCCAAAT-GATTGATGGAAT-GAGCTATGT 356
Query 309 TAAAGTTCTCAGACTCTGGCTCCTGT-TC-CAGAACCTCTCCTACACTATTGCTGGTGGT 366
||||||||| ||||||||||| ||| | || |||||||||| || | |||||||||||
Sbjct 357 TAAAGTTCTTAGACTCTGGCT--TGTAACTCAAAACCTCTCCTTCATTGTTGCTGGTGGT 414
Query 367 GCAGTCATCAAGTTGTTGCTAGTTTCC-GATCTTAAGTCCCGGAATCTCGCGGTGTTT-G 424
|||||| | ||| || ||| | || ||||||||||| | |||| || | || ||| |
Sbjct 415 GCAGTCGTTGCTTTGCTGGTAG-TACCTGATCTTAAGTCTCAGAATTTCCCTGT-TTTCG 472
Query 425 CAATC-TTGGTTGTGTTAACGAATGTTGCTGGCGCCATTGGAGTTCTTTCGACTCTTGCT 483
||| | ||||| ||||| |||||| || |||||||||||||||| || || ||||||||
Sbjct 473 CAA-CATTGGTCGTGTTGACGAATCTTTCTGGCGCCATTGGAGTACTCTCTACTCTTGCA 531
Query 484 GGCACCATTCTGATCGAACGAGACTGGGCTGTGGTTATGTCAGAAGGTCATCCACCAGCA 543
|||||| || |||||||||||||||||| ||| |||||||| ||||||||| |||||||
Sbjct 532 GGCACCGTTTTGATCGAACGAGACTGGGTTGTTGTTATGTCGGAAGGTCATTCACCAGCG 591
Query 544 GTATTGACAAGAATGAATTCTGTCATTAGGGGCATTGATTTGAGCTCCAAGTTATTTTCT 603
|| || ||||||||||| ||||| ||||| |||||||| |||||||| ||| || | |||
Sbjct 592 GTTTTAACAAGAATGAACTCTGTTATTAGAGGCATTGACTTGAGCTCTAAGCTACTGTCT 651
Query 604 CCAGTCATCACTGGTCTGATCATCAGTTTTGTCTCACTTAAG-GCGTCAGCGATAACTTT 662
|| || || |||||| ||||||| || ||||| || ||| || || ||||| || || ||
Sbjct 652 CCGGTTATAACTGGTTTGATCATTAGCTTTGTATCTCTT-AGAGCATCAGCTATCACATT 710
Query 663 TGCAGCTTGGGCCACTATAACAGCT-TGGGTTGAATATTGGCTCTTCATTTCAGTTTATA 721
|||||||||||| ||||| || | | ||| |||| ||||||||||| || || || ||||
Sbjct 711 TGCAGCTTGGGCTACTATTACCG-TGTGGATTGAGTATTGGCTCTTTATCTCTGTGTATA 769
Query 722 GTGGTGTTCCTGCGATAGCACGAAGCAATGAGAGACGGA-TCTTGCGTTCCCG-GACAA- 778
||||||||||| |||| || |||| |||||||| ||| | || | | || |||
Sbjct 770 ACGGTGTTCCTGCTATAGTACAAAGCGATGAGAGAAGGAGT-TTAAGGT--CGTCTCAAT 826
Query 779 AGCAAGTAGAAGGA-ACAG--A-TGCACCT-GTTTCTGTATCTAATGCTCCGGGAACA-G 832
||||| ||| || |||| | |||| || |||| | ||| | | || | ||| |
Sbjct 827 CGCAAGCGGAA-GAGACAGATAGTGCATCTAGTTT-T-TATGT--TCCT-CTTTTACACG 880
Query 833 AGGA-GAGTTC-TACT-GGAACCCCACCGTGTAGAACCGGAATCCGGAA-GATTCTTAAT 888
| || ||| || || | |||| | | |||||| | |||| | || ||||||| |
Sbjct 881 AAGAGGAG-TCTTA-TAGGAA-TACGCAAAGTAGAAGCAGAAT-CTTAAGGATTCTTGAG 936
Query 889 AGAGTATCCAAGTCCTCTTTTGTTGGCGCATGGA-GAATATATTTCAATCAAGAAG-TTG 946
||| | || |||| ||||||||| |||| |||| |||| ||| ||||||||| || |||
Sbjct 937 AGAATCTCTGAGTCTTCTTTTGTTAGCGCGTGGAGGAAT-TATCTCAATCAAG-AGATTG 994
Query 947 TACTCCCCGGGGTTTCTCTAGCTCTCTTGTTCTTCACCGTCCTCAGCTTTGGAACATTGA 1006
| ||||| || |||||||||||||| ||||||||||| |||||||||||||||||| |||
Sbjct 995 TGCTCCCTGGAGTTTCTCTAGCTCTATTGTTCTTCACTGTCCTCAGCTTTGGAACACTGA 1054
Query 1007 TGACGGCTACATTGCAGTGGGAAGGGATACCTACATATATCATCGGTATAGGCAGGGGAA 1066
||||||| |||||| ||||| ||||||||||||| |||||||| ||||||||||| ||||
Sbjct 1055 TGACGGCGACATTGGAGTGGAAAGGGATACCTACTTATATCATTGGTATAGGCAGAGGAA 1114
Query 1067 TAAGTGCAACG-GTTGGACTAACGGCTA-CATTAGTGTATCCGCTAATGCAATCCCGTCT 1124
| || || | | ||||| ||| | |||| | || |||| || || |||||||||||| |
Sbjct 1115 TCAGCGC-AGGTGTTGGTCTAGCTGCTACCGTT-TTGTACCCTCTCATGCAATCCCGTAT 1172
Query 1125 GTCAACGCTGAGAACCGGTCTCTGGTCCTTCTGGTCTCAGTGGAGCTGCCTTTTGGTCTG 1184
||| | || |||||||| |||||||||| ||||||||||||| ||| |||||||| ||
Sbjct 1173 CTCACCTCTCAGAACCGGAGTCTGGTCCTTTTGGTCTCAGTGGACCTGTCTTTTGGTGTG 1232
Query 1185 CGTTGGATCGATATGGGTTAAAAAGGATAAAATAGCATCTTACATGCTAATGGCTGGAGT 1244
|||||||| || |||||| | ||||| ||||||||||| |||||||| |||||||||||
Sbjct 1233 TGTTGGATCAATTTGGGTTGAGAAGGAGAAAATAGCATCCTACATGCTCATGGCTGGAGT 1292
Query 1245 TGCTGCTTCAAGGCTTGGCTTGTGGATGTTTGATCTTTCCGTCATCCAACAAATGCAGGA 1304
||||||||| |||||||| ||||||||||| |||||| | || ||||| |||||||||||
Sbjct 1293 TGCTGCTTCTAGGCTTGGTTTGTGGATGTTCGATCTTGCGGTAATCCAGCAAATGCAGGA 1352
Query 1305 TCTTGTTTCAGAATCCGACCGTTGTGTGGTTGGAGGTGTTCAGAACTCACTGCAATCGGC 1364
||||||| | ||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1353 TCTTGTTCCGGAATCGGACCGTTGTGTGGTTGGAGGTGTTCAGAACTCGTTGCAATCGGC 1412
Query 1365 TCTTGACTTGATGGCATA-TCTATTAGGTATCATTGTCTCCAATCCAAAGGATTTCTGGA 1423
||||||||||||||| || ||| || ||||||||||| || ||||| |||||||| ||||
Sbjct 1413 TCTTGACTTGATGGC-TAATCTTTTGGGTATCATTGTATCTAATCCCAAGGATTTTTGGA 1471
Query 1424 TATTGACGTTGATCTCATTCTCC-ACTGTGTCGTTAGCAGGAATGCTCTATACAATTCAT 1482
| ||||||||||||||||| | | || || |||||||| ||||| |||||||| |||||
Sbjct 1472 TGTTGACGTTGATCTCATT-TGCTACGGTTTCGTTAGCCGGAATACTCTATACGATTCAC 1530
Query 1483 CTCTACCGGATTAGAAACCACAT-T-TTTCACTTTGAGAAGATTCCTTTGTTGAACAA 1538
|||||||| ||| |||| |||| | |||||||| ||||||||||| || ||||||||
Sbjct 1531 CTCTACCGTATTCGAAA--ACATCTATTTCACTTGGAGAAGATTCCCTTATTGAACAA 1586
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 77911245840
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5