BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg901794 Length=1653 Score E Sequences producing significant alignments: (Bits) Value AT2G38720.1 | Symbols: MAP65-5 | microtubule-associated protein... 2021 0.0 > AT2G38720.1 | Symbols: MAP65-5 | microtubule-associated protein 65-5 | chr2:16188047-16192266 FORWARD LENGTH=1928 Length=1928 Score = 2021 bits (1094), Expect = 0.0 Identities = 1216/1275 (95%), Gaps = 7/1275 (1%) Strand=Plus/Plus Query 1 ATGTCTCCGTCTTCAACCACCACTTGCACTTCCCTTCTTGAAGAGTTGCAGATAATATGG 60 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct 1 ATGTCTCCGTCTTCAACCACTACTTGCACTTCCCTTCTTGAAGAGTTGCAGATGATATGG 60 Query 61 GATGAGATTGGTGAAAGTTACAATGAAAGAGATAAGATGCTGCTAGAACTTGAGCAGGAA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GATGAGATTGGTGAAAGTTACAATGAAAGAGATAAGATGCTGCTAGAACTTGAGCAGGAA 120 Query 121 TGTCTGGATATATACAATAAGAAGGTTGAGAAAACTCGTAAGTACAGAGCTGAGTTACAG 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 121 TGTCTGGATATATACAATAAGAAGGTTGAGAAAACTCGTAAGTTCAGAGCTGAGTTACAG 180 Query 181 CGATCCTTAGCTCAAGCTGAAGCTGAGATTGCCAGCCTCATGTCTGCGCTTGGTGAAAAA 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 CGATCATTAGCTCAAGCTGAAGCTGAGATTGCCAGCCTCATGTCTGCGCTTGGTGAAAAA 240 Query 241 GTTTCGTTTCCCAAGAA-A--GAAGGCTCTTTGAAGGAGCAAATATCT-GCTGTAAAGCC 296 ||||||||| ||||||| | |||||||||||||||||||| || || | ||||||||| Sbjct 241 GTTTCGTTTGCCAAGAAGAAAGAAGGCTCTTTGAAGGAGCAGATTTCCAG-TGTAAAGCC 299 Query 297 TGTACTGGAAGATCTACTGATGAAAAAGGATCGAAGAAGGAAAGAGCTCTCTGAGACACA 356 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 300 TGTACTGGAAGATCTACTGATGAAAAAGGATCGAAGAAGGAAAGAGCTCTCTGAGACACT 359 Query 357 GACTCAAATAGAAGAGATCTCTTCTAACATAGCGGGGAATGATTATACTGTTTGTTCTGG 416 || |||||||| ||||||| | ||||||||||| |||||||||||||||||| ||||||| Sbjct 360 GAATCAAATAGCAGAGATCACGTCTAACATAGCAGGGAATGATTATACTGTTAGTTCTGG 419 Query 417 TCCTGAAATTGATGAAAGTGACTTGACACAAAGAAAGTTGGATGAACTTAGAGAACG-TC 475 | | ||| ||||||||||||||||||||||||||||||||||||||||||||| | | || Sbjct 420 TTCAGAAGTTGATGAAAGTGACTTGACACAAAGAAAGTTGGATGAACTTAGAGCA-GATC 478 Query 476 TGCAGGATCTTCGCAATGAAAAGGCTGTTCGACTGCAGAAAGTAAACTCTTATATCAGTG 535 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 479 TGCAGGATCTTCGAAATGAAAAGGCTGTTCGACTGCAGAAAGTAAACTCTTATATCAGTG 538 Query 536 CTGTCCATGAGCTGTCAGAGATTATGTCATTTGATTTCTCCAAGGCCTTGAATAATGTCC 595 ||||||||||||||||||||||| |||| |||||||||||||||||| |||||| ||||| Sbjct 539 CTGTCCATGAGCTGTCAGAGATTCTGTCTTTTGATTTCTCCAAGGCCCTGAATAGTGTCC 598 Query 596 ATAGCAGCTTGGCTGACTTTTCAAAGACTCATTCGAAAAGCATTAGTAATGATACTCTTG 655 ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 599 ATAGCAGCTTGACTGAGTTTTCAAAGACTCATTCGAAAAGCATTAGTAATGATACTCTTG 658 Query 656 CTAGATTAACAGAACTTGTAAAGTCTCTCAAGGAGGAGAAACATGAGAGGCTGCTTAAGC 715 |||| || |||||||||||||||||||| |||| |||||||||||||||||||||||||| Sbjct 659 CTAGGTTCACAGAACTTGTAAAGTCTCTGAAGGCGGAGAAACATGAGAGGCTGCTTAAGC 718 Query 716 TACAAGGTTTGGGAAGAAGCATGCAAGAGCTGTGGAACCTAATGGAAACACCTATGCATG 775 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 719 TACAAGGTTTGGGAAGAAGCATGCAAGAGCTGTGGAACCTAATGGAAACACCTATGGATG 778 Query 776 AGAGGAGAAGATTTGACCATTGCAGTAGCTTACTTTCTGGTCCACCTGATGTTGCCATGA 835 ||||||||||||||||||||||||| |||||||||||| ||| |||||||| |||| ||| Sbjct 779 AGAGGAGAAGATTTGACCATTGCAGCAGCTTACTTTCTAGTCTACCTGATGATGCCTTGA 838 Query 836 AAAAAGGATGCCTCGGTCTGGACATTATCCGAGAGGCCGAAGATGAAGTGAAAAGACTCA 895 |||||||||||||| | || ||||||||||||||||||||||||||||||| |||||| | Sbjct 839 AAAAAGGATGCCTCAGCCTAGACATTATCCGAGAGGCCGAAGATGAAGTGAGAAGACTGA 898 Query 896 ATGCCCTGAAGTCCAGCAAAATGAAGGAATTGGTGTTTAAGAGGCTGTGTGAACTAGAAG 955 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 899 ATTCCCTGAAGTCCAGCAAAATGAAGGAATTGGTGTTTAAGAGGCAGTGTGAACTAGAAG 958 Query 956 AGATCTGTAGAGGGAATCATATGGACATTAATAGTGATGCTGCAAGAAAGAGTCTTGTCG 1015 ||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct 959 AGATCTGCAGAGGGAATCATATGGATATCAATAGTGATGCTGCAAGAAAGAGTCTTGTCG 1018 Query 1016 ACCTCATTGAATCTGGTGATGGTGATCTGTCTGATATTCTTACAAGAATAGATGGTCAGA 1075 | ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct 1019 AACTCATTGAATCTGGTGATGGTGATCTGTCTGATATTCTTGCAAGCATAGATGGTCAGA 1078 Query 1076 TCGAGAAGGCAAGAGAAGAAGCTTTAAGCAGAAAGGAAATTTTGGACAAAGTTGATAAGT 1135 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1079 TCGAGAAGGCAAGAGAAGAAGCTTTAAGCAGAAAGGAAATATTGGACAAAGTTGATAAGT 1138 Query 1136 GGAGACATGCAAAGGAGGAAGAAACATGGCTTGATGACTATGAAAAGGATGAAAATCGCT 1195 ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1139 GGAGACACGCAAAGGAGGAAGAAACATGGCTTGATGATTATGAAAAGGATGAAAATCGCT 1198 Query 1196 TCAGTGCTGTGAGAGGAGCACACAAAAATCTAAAACGGGCAGAAAAAGCTAGGAGCCTTA 1255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1199 TCAGTGCTGTGAGAGGAGCACACAAAAATCTAAAACGGGCAGAAAAAGCTAGGAGCCTTA 1258 Query 1256 TCAGCAAAATTCCTG 1270 ||||||||||||||| Sbjct 1259 TCAGCAAAATTCCTG 1273 Score = 628 bits (340), Expect = 4e-179 Identities = 366/379 (97%), Gaps = 0/379 (0%) Strand=Plus/Plus Query 1273 ATGGTCGATGTTCTGACCACGAAAGTGAAGGCCTGGGAGAAAGAAAGAGGAGTCCCCTTC 1332 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1384 ATGGTGGATGTTCTGACCACGAAAGTGAAGGCCTGGGAGAAAGAAAGAGGGGTCCCCTTC 1443 Query 1333 TTATGTGATAAGCAACCGTTATTACAAACTCTAGAAGAAGACATTGTTATCCGTGCTCAA 1392 ||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct 1444 TTATGCGATAAGCAACCGTTATTACAAACACTAGAAGATGACATTGTTATCCGTGCTCAA 1503 Query 1393 AGAGAAGAGGAAAAGCGTCAATTCCGAGAGCAGAAACGACTACAAGGTCAGCTTGCTACA 1452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1504 AGAGAAGAGGAAAAGCGTCAATTCCGAGAGCAGAAACGACTACAAGGTCAGCTTGCTACA 1563 Query 1453 GAGAAAGAAGCAAAGTATGGTTCAAAGTCTGCAAAGAAGAAGCAATTGGGACAGAGTCTG 1512 ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct 1564 GAGAAAGAAGCAAAGTATGGTTCCAAGTCTGCAAAGAAGAAGCCATTGGGACAGAGTCTT 1623 Query 1513 AACACAGACAATGTGACTAAAACTCCCATTGGTCGACGCATTGGGAATACACCTGGACGT 1572 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 1624 AACACAGACAATGTGACTAAAACTCCCATTGGTCGGCGCATTGGAAATACACCTGGACGT 1683 Query 1573 TCTGCTACTTCTGGCGGCAAAGATTATAGAGGCAATGCCGTGATACCATTGAACTATGTT 1632 |||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1684 TCTGTTACTTCTGGTGGCAAAGATTATAGAGGCAATGCGGTGATACCATTGAACTATGTT 1743 Query 1633 GCTCTTCAGAAAGACGATT 1651 ||||||||||||||||||| Sbjct 1744 GCTCTTCAGAAAGACGATT 1762 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 81676286715 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5