BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg902166
Length=1164
Score E
Sequences producing significant alignments: (Bits) Value
AT2G41880.1 | Symbols: GK-1, AGK1 | guanylate kinase 1 | chr2:1... 1794 0.0
AT3G57550.2 | Symbols: AGK2, GK-2 | guanylate kinase | chr3:213... 990 0.0
> AT2G41880.1 | Symbols: GK-1, AGK1 | guanylate kinase 1 | chr2:17474619-17477223
FORWARD LENGTH=1556
Length=1556
Score = 1794 bits (971), Expect = 0.0
Identities = 1103/1166 (95%), Gaps = 12/1166 (1%)
Strand=Plus/Plus
Query 1 ATGGGAGAAGCTCCAGCAAT-TTCAGTGGATCATCTGGAGAACGGACACTTCAATGGCGT 59
|||||||||||||||||| | || ||||||||||| |||||||||||||| |||||| ||
Sbjct 246 ATGGGAGAAGCTCCAGCAGTATT-AGTGGATCATCCGGAGAACGGACACTCCAATGGTGT 304
Query 60 CTGTGTGAAATCTGCACCCGAGAACATTGAGATATCAGTAGATGCCGGCGATCGAACT-T 118
|||||||||||||| ||| ||||||| ||||||| |||| |||| ||||||||||| | |
Sbjct 305 CTGTGTGAAATCTGAACCAGAGAACACTGAGATAACAGTCGATGTCGGCGATCGAA-TAT 363
Query 119 TTGTGATCGGTGGAAATCATGAAAGGAACAATTTTTCCATTGGGGTTCAGATTTATGACA 178
|| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 364 TTTTGATCGGTGGAACTCATGAAAGGAACAATTTTTCCATTGGGGTTCAGATTTATGACA 423
Query 179 AAATCATTAACAATTGGTTTAGTCCTATTGTGCTTGGGACAGGTCCTAAGCCCAGCCAGG 238
|||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 424 AAATCAGTAACAACTGGTTTAGTCCTATTGTGCTTGGGACAGGTCCTAAGCCCAGCAAGG 483
Query 239 GGTACTCTGCGTTTGTTCTCGAACAAGGTCGGATTTTGGTTATTAAGAAAGGTTCACCTC 298
||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 484 GGTACTCCGCGTTTGTTCTTGAACAAGGTCGGATTTTGGTTATTAAAAAAGGTTCACCTC 543
Query 299 GAAATGAATCCATCTGGTTCCTCGAGGTAGATAGTCCATATGTGCGGGAACAGAAGAAAT 358
| || || |||||||||||||||||||| |||||||| |||||||||||||||||||| |
Sbjct 544 GCAACGACTCCATCTGGTTCCTCGAGGTCGATAGTCCTTATGTGCGGGAACAGAAGAAGT 603
Query 359 TACTAGGGAAGGAAGTTGTTGCGTGGAGTAAAGGTGTGAGAGGCAATGCCGAGAAGCCTA 418
||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 604 TACTAAGGAAGGAAGTTGTTGCTTGGAGTAAAGGTGTGAGAGGCAATGCTGAGAAGCCTA 663
Query 419 TTGTTATAAGCGGTCCTTCTGGAGTTGGAAAAGGAACGCTTATATCAATGCTTATGAAGG 478
|||||||||||||||||||||| || || |||||||||||||||||||||||||||||||
Sbjct 664 TTGTTATAAGCGGTCCTTCTGGTGTGGGCAAAGGAACGCTTATATCAATGCTTATGAAGG 723
Query 479 AGTTTCCTTCAATGTTTGGGTTCTCAGTGAGCCACACAACTCGATCTCCAAGGTCTATGG 538
||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||
Sbjct 724 AGTTTCCTTCAATGTTTGGGTTCTCTGTGAGTCACACAACTCGATCTCCGAGGTCTATGG 783
Query 539 AGA-GAGATGGTGTTCATTATCACTTTGCTGATAAAAAAGTTATGGAGAAAGAAATCAAA 597
||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 784 AGATG-GACGGTGTTCATTATCACTTTGCTGATAAAAAAGTTATGGAGAAAGAAATCAAA 842
Query 598 GATGGAAAGTTTCTTGAGTTTGCTTCTGTTCATGGTAATCTCTATGGAACCAGCATTGAG 657
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 843 GACGGAAAGTTTCTTGAGTTTGCTTCTGTTCACGGTAATCTCTATGGAACCAGCATTGAG 902
Query 658 TCCGTTG-AGATGGTAACAGATTCAGGAAAGAGATGTATTCTCGACATTGATGTTCAGGG 716
||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 903 TCCGTTGAAG-CGGTAACAGATTCAGGAAAGAGATGTATTCTCGACATTGATGTTCAGGG 961
Query 717 GGCAAGGTCTGTGAGAGCGAGTTCTCTTGATGCCATATTCATATTCGTGTGTCCCCCTTC 776
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 962 GGCAAGGTCTGTGAGAGCGAGTTCTCTTGATGCCATATTCATATTCGTATGTCCCCCTTC 1021
Query 777 AATGAAAGAGCTTGAAGATCGGCTCCGTGCTAGAGGAACCGAGACAGAGGAGCAAATTCA 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1022 AATGAAAGAGCTTGAAGATCGGCTCCGTGCTAGAGGAACCGAGACAGAGGAGCAAATTCA 1081
Query 837 AAAGCGGCTTAGAAATGCTGAGGCAGAGATGAAAGAGGGGATATCCTCGGGTATTTTCGG 896
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 1082 AAAGCGGCTTAGAAATGCTGAGGCAGAGATCAAAGAAGGGATATCCTCGGGTATTTTCGG 1141
Query 897 TCTCATTTTGTATAATGACAACCTTGAGGAATGCTACAAGAAGCTCAAGAAACTCTTGGG 956
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1142 TCTCATTTTGTATAATGACAACCTTGAGGAATGCTACAAGAAGCTCAAGAATCTCTTGGG 1201
Query 957 GCTAGATGGAGTCACTTC-TGTCAATGGTGTAGAAATTGAAGGGATCAATCTTCCCACCG 1015
|||||||||| || || | |||||||||||||||||| || |||||||||||||||| |
Sbjct 1202 GCTAGATGGACTCGCT-CATGTCAATGGTGTAGAAATAGAGGGGATCAATCTTCCCATTG 1260
Query 1016 AGCACACAGTATCTAAAATGGAAGATAAGATCATTATTCAAGAAACAGGAAAAGAAACAA 1075
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1261 AGTACGCAGTATCTAAAATGGAAGATAAGATCATTATTCAAGAAACAGGAAAAGAAACAA 1320
Query 1076 GGA-TCAAGATTGTATTGGATATATCTTCGCTTAATGGAGGAGCACCGGGTAGAACAAGG 1134
||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1321 GGAAT-AAGATTGTAGTGGATATATCTTCGCTTAATGGAGGAGCACCGGGTAGAACAAGG 1379
Query 1135 GGGATTCTTGTCGACGCCATAAAGTT 1160
|||||||||||||||||||| |||||
Sbjct 1380 GGGATTCTTGTCGACGCCATTAAGTT 1405
> AT3G57550.2 | Symbols: AGK2, GK-2 | guanylate kinase | chr3:21306723-21309464
FORWARD LENGTH=1777
Length=1777
Score = 990 bits (536), Expect = 0.0
Identities = 964/1166 (83%), Gaps = 48/1166 (4%)
Strand=Plus/Plus
Query 1 ATGGGAGAAGCTCCAGCAATTTC--AGTGGATCATCTGGAGAACGGACACTTCAATGGCG 58
||||||||||| ||||| |||| ||||||||||||||||| ||| || |||||||
Sbjct 334 ATGGGAGAAGCACCAGC--TTTCTTTGTGGATCATCTGGAGAATGGATACACCAATGGC- 390
Query 59 TCT-GTGTGAAATCTGCA-CCCGAGAACATTGAGAT--ATCAGTAG-ATGCCGGCGATCG 113
| | |||| ||||| | | || |||||| ||||| ||| || | | || |||||
Sbjct 391 TTTGGTGTCAAATCCG-AGCCTAAGAACA--GAGATACATCTGT-GCTTATTGGGGATCG 446
Query 114 AACTTTTGTGATCGGTGGAAATCATGAAAGG-AA-CAATTTTTCCATTGGGGTTCAGATT 171
| | |||||||| ||||||||||||| |||| || | ||| |||| |||| |||||||||
Sbjct 447 ATCCTTTGTGATTGGTGGAAATCATG-AAGGAAACCCATTGTTCC-TTGGTGTTCAGATT 504
Query 172 TATGACAAAATCATTAACAATTGGTTTAGTCCTATTGTGCTTGGGACAGGTCCTAAGCCC 231
|||||||| ||| |||||| |||| ||||||| ||| ||||| || || ||||| |||
Sbjct 505 CATGACAAAGTCACTAACAAGTGGTCCAGTCCTAGTGTTCTTGGAACTGGCCCTAAACCC 564
Query 232 AGCCAGGGGTACTCTGCGTTTGTTC-TCGAACAAGGTCGGATTTTGGTTATTAAGAAAGG 290
|| |||| |||||||| |||||| || || ||||||||||||||||||| || |||||
Sbjct 565 TGCAAGGGTTACTCTGCCATTGTTCTTCCAA-AAGGTCGGATTTTGGTTATCAAAAAAGG 623
Query 291 TTCA-CCTCGAAATGAATCCATCTGGTTCCTCGAGGTAGATAGTCCATATGTGCGGGAAC 349
||| | || |||| ||||| |||||||| ||||| |||| ||| | | | |||||||
Sbjct 624 CTCAGCTTC-TGATGACTCCATTTGGTTCCTTGAGGTGGATACTCCTTTTATCCGGGAAC 682
Query 350 AGAAGAAATTACTAGGGAAG-GAAGTTGTTGCGTGGAGTAAAGGTGTGAGAGGCAATGCC 408
| |||||||| || ||||| || |||||||| ||||||||||| || || || |||||
Sbjct 683 AAAAGAAATTGCT-TGGAAGAGAGGTTGTTGCTTGGAGTAAAGGAGTAAGGGGAAATGCA 741
Query 409 GAGAAGCCTATTGTTATAAGCGGTCCTTCTGGAGTTGGAAAAGGAACGCTTATATCAATG 468
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 742 GAGAAGCCTATTGTTATAAGCGGTCCTTCTGGAGTTGGAAAAGGAACACTTATATCGATG 801
Query 469 CTTATGAAGGAGTTTCCTTCAATGTTTGGGTTCTCAGTGAGCCACACAACTCGATCTCCA 528
|| |||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||
Sbjct 802 CTCATGAAGGAGTTTCCTTCAATGTTTGGGTTCTCTGTGAGCCACACGACTCGAGCTCCA 861
Query 529 AGGTCTATGGAGAGAGA-TGGTGTTCATTATCACTTTG-CTGATAAAAAAGTTATGGAGA 586
|||| |||||||| ||| ||||||||| || || ||| ||||||| | ||||||||||
Sbjct 862 AGGTGTATGGAGA-AGAATGGTGTTCACTACCA-TTTCACTGATAAGACTGTTATGGAGA 919
Query 587 AAGAAATCAAAGATGGAAAGTTTCTTGAGTTTGCTTCTGTTCATGGTAATCTCTATGGAA 646
|||||||||||||||| |||||||| |||||||| |||||||| || ||||| || ||||
Sbjct 920 AAGAAATCAAAGATGGGAAGTTTCTCGAGTTTGCGTCTGTTCACGGCAATCTATACGGAA 979
Query 647 CCAGCATTGAGTCCGTTGAGATGGTAACAGATTCAGGAAAGAGATGTATTCTCGACATTG 706
|||||||||| ||||||||| | ||||||||||||||||||||||| ||| | || ||||
Sbjct 980 CCAGCATTGAATCCGTTGAGGTTGTAACAGATTCAGGAAAGAGATGCATTTTGGATATTG 1039
Query 707 ATGTTCAGGGGGCAAGGTCTGTGAGAG-CGAGTTCTCTTGATGCCATATTCATATTCGTG 765
||||||| || || ||||| |||| || ||||||| || ||||| ||||||||||||||
Sbjct 1040 ATGTTCAAGGAGCGAGGTCAGTGA-AGGCGAGTTCACTGGATGCGATATTCATATTCGTT 1098
Query 766 TGTCCCCCTTCAATGAAAGAGCTTGAAGATCGGCTCCGTGCTAGAGGAACCGAGACAGAG 825
||||| ||||||||||| || |||||||||||||| ||||| ||||||| |||||||||
Sbjct 1099 TGTCCTCCTTCAATGAAGGAACTTGAAGATCGGCTTCGTGCCCGAGGAACAGAGACAGAG 1158
Query 826 GAGCAAATTCAAAAGCGGCTTAGAAATGCTGAGGCAGAGATGAAAG-AGGGGATATCCTC 884
|||||||| ||||||||||||||||| ||||| |||||||| |||| |||| | ||||||
Sbjct 1159 GAGCAAATCCAAAAGCGGCTTAGAAACGCTGACGCAGAGATCAAAGCAGGGAA-ATCCTC 1217
Query 885 GGGTATTTTCGGTCTCATTTTGTATAATGACAACCTTGAGGAATGCTACAAGAAGCTCAA 944
|| ||||| | | || ||||||||||||||||||||||||||||||||| || ||
Sbjct 1218 TGGCATTTTTGAACACAAACTGTATAATGACAACCTTGAGGAATGCTACAAGACCCTTAA 1277
Query 945 GAAACTCTTGGGGCT-AGATGGAG-TCACTTCTGTCAATGGTGTAGAA--ATT-GAAGGG 999
||| ||||||||| | | | | | | || |||| |||||||||||| | | ||||||
Sbjct 1278 GAATCTCTTGGGGATTA-ACG-ACCTTGCTCCTGTGAATGGTGTAGAAGCAGTAGAAGGG 1335
Query 1000 ATCAATCTTCCCACCGAGCACACAGTATCTAAA-ATGGAAGATAAGATCATT-ATTCAAG 1057
|||||||| |||| |||||||||||| | ||| ||||| || ||||| || |||||||
Sbjct 1336 ATCAATCTGCCCAAGGAGCACACAGTAAC-AAAGATGGATGACAAGATT-TTGATTCAAG 1393
Query 1058 AAACAGGAAAAGAAAC-AAGGATCAAGAT--T-GTATTGGATATATCTTCGCTTAATGGA 1113
|||||||| ||| ||| ||| | ||| || | || |||||| ||||||| | || ||
Sbjct 1394 AAACAGGAGAAGGAACCAAGAA-CAAAATGATCGTGTTGGATTTATCTTCAATCAACGGG 1452
Query 1114 GGAGCACCGGGTAGAACAAGGGGGAT 1139
||||||||||| |||||||| |||||
Sbjct 1453 GGAGCACCGGGAAGAACAAGAGGGAT 1478
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 57128220210
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5