BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg902383
Length=1896
Score E
Sequences producing significant alignments: (Bits) Value
AT2G43690.1 | Symbols: | Concanavalin A-like lectin protein ki... 1242 0.0
AT2G43700.1 | Symbols: | Concanavalin A-like lectin protein ki... 1166 0.0
> AT2G43690.1 | Symbols: | Concanavalin A-like lectin protein
kinase family protein | chr2:18112589-18114583 FORWARD LENGTH=1995
Length=1995
Score = 1242 bits (672), Expect = 0.0
Identities = 1065/1253 (85%), Gaps = 34/1253 (3%)
Strand=Plus/Plus
Query 16 TGGTTAATGGTTCTGGTGATCATTGCTCTGTTTAATCTTGAAAACTCACTTGGCAGGCTT 75
||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 25 TGGTTGATGGTTCTGGTGATCATTGCTCTGTCTAATCTTGAAAGCTCACTTGGCAGGCTT 84
Query 76 GTTTTTGAGGGATCCACTGGGATT-ATTAATGGTTTCCCAATGTTGACAAACACCAAGAA 134
||||||||||||||| | ||| || || ||||||||| | | ||||||||||||||||||
Sbjct 85 GTTTTTGAGGGATCCGCCGGG-TTAATGAATGGTTTCACGACGTTGACAAACACCAAGAA 143
Query 135 GCACGTCTATGGTCAAGCCTTCGATGACGAGCCATTCCCTTTCAAGAATTCGACCAACGG 194
|||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 144 ACACGCCTATGGTCAAGCCTTCAATGACGAGCCATTCCCTTTCAAGAATTCGGTCAACGG 203
Query 195 TAACATGACTTCGTTTTCTTTTACCTTCTTCTTTGCTATCGTCCCTGGGCATAGAGA-AA 253
|||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||| ||
Sbjct 204 TAACATGACTTCGTTTTCATTTACCTTCTTCTTTGCTATCGTCCCTGAGCATATAGACAA 263
Query 254 GAGGCTCTCACGGTATGGCCTTCGTGATCTCGCCTACAAGAGGCCTTCCAGGTGCTTTTG 313
||| ||||||||||| ||||| |||||||| || || |||||| |||| ||||| | |
Sbjct 264 -AGGTTCTCACGGTATAGCCTTTGTGATCTCTCCCACGAGAGGCATTCCTGGTGCATCCG 322
Query 314 CTGATCAGTACCTCGGAATATTCAACGATACAGACAATGGAAAAAGCTCGAATCATGTCA 373
||||||||||||| || || |||||||||||| | ||||||| ||||| || ||| |||
Sbjct 323 CTGATCAGTACCTTGGTATCTTCAACGATACAAATGATGGAAATAGCTCCAACCATATCA 382
Query 374 TTGCTGTGGAGCTCGATATACATAAAGATGATGAATTTGGTGACGTTAATGATAACCACG 433
||||||||||||| |||||||||||||| ||||||||||||||| || |||||||||| |
Sbjct 383 TTGCTGTGGAGCTTGATATACATAAAGACGATGAATTTGGTGACATTGATGATAACCATG 442
Query 434 TTGGTATTAACATTAATGGAATGAGATCTAACATATCTGCTCCTGCCGGGTATTTTGATC 493
||||||| || |||||||| |||||||||| |||||||||||||||| |||| |||||
Sbjct 443 TTGGTATCAATATTAATGGTATGAGATCTATTGTATCTGCTCCTGCCGGTTATTATGATC 502
Query 494 AAAAGGGTCAGTTCAAAAGCCTTTCTCTAATCAGTGGAAATCTACTCCGAGTCACGATTT 553
|||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct 503 AAAATGGTCAGTTCAAAAATCTTTCTTTAATCAGTGGAAATCTACTCCGAGTCACGATTT 562
Query 554 TGTATAGCCAGGaaaaaaaaCAGCTTAGCGTCACCTTATCATCACCAGAGGAGGCTTAT- 612
|||||||||||||| |||||||||||| |||||||||||| || ||||||| ||| ||
Sbjct 563 TGTATAGCCAGGAAGAAAAACAGCTTAATGTCACCTTATCACCAGCAGAGGAAGCTAATG 622
Query 613 TACCCGAA-TCAGCCACTTCTATT-ACTGAACCAAGATCTGTCACCGTATTTGTTGGA-G 669
| ||| || | ||| ||||| || ||||||| ||||| ||||||||||| | || | |
Sbjct 623 T-CCCAAAGTG-GCCTCTTCT-TTCACTGAACAAAGATTTGTCACCGTATCT-TTCAAAG 678
Query 670 AAAATGTATCTCGGCTACACTGCCTCCACAGGTTCGGTTGGAGCATTACATTACATATGG 729
|| |||||| |||||| ||| || ||||| || ||||| |||||| |||||||||| |||
Sbjct 679 AATATGTATATCGGCTTCACAGCTTCCACTGGGTCGGTCGGAGCAATACATTACATGTGG 738
Query 730 ACGTTACATGTGTATGATATCGCTG-TGGTTCCAGATCTGGATTTCCCTATACCGACGTT 788
| || |||| | | | | | | |||||| | |||||||| |||||| || ||
Sbjct 739 ATGTGGTATGTATTT-ACCTTTATTATTGTTCCAAAACTGGATTTTGATATACCAACCTT 797
Query 789 TCCTCCATATCCCAAGCCAAAGTCTCAGGTAA-GACGGACT-GT-CTTGGTGAC-TTGCT 844
|||||||||||||||| || |||||||||||| | | || | || |||| |||| || ||
Sbjct 798 TCCTCCATATCCCAAGGCAGAGTCTCAGGTAAAG-CTGA-TAGTTCTTG-TGACGTT-CT 853
Query 845 TGACATTGG-TCCTCTTTGTTGCGGTTGCTGCATCAGCTTTAAGTCTCTTCTTCTATA-G 902
|||| |||| || ||||||||||| |||||||||||||||||| | | |||||||||| |
Sbjct 854 TGACTTTGGCTC-TCTTTGTTGCGCTTGCTGCATCAGCTTTAATTGTTTTCTTCTATAAG 912
Query 903 AAGACATAA-AAAGGTTAAGGAGGTTCTAGAGGAATGGGA-GATCCAATGTGGGCCTCAT 960
| ||||||| ||| || ||||||||| ||||||||||| | || ||||||| || |||
Sbjct 913 A-GACATAAGAAACTTTT-GGAGGTTCTCGAGGAATGGGAAG-TCGAATGTGGACCACAT 969
Query 961 AGGTTTGCTTACAAAGAACTCTTTAAAGCCACAAAGGGTTTCAAACAACTTGTGGGCAAA 1020
|||||| |||||||||||||||| || |||||||| ||||||||||||||| | ||| ||
Sbjct 970 AGGTTTTCTTACAAAGAACTCTTCAATGCCACAAATGGTTTCAAACAACTTCTCGGCGAA 1029
Query 1021 GGAGGGTTCGGTCAGGTTTTTAAGGGTACACTTCCAGGTTCAGACGCAGAA-ATTGCTGT 1079
|| ||||| |||| || ||||| || |||||| |||||||| | ||| || ||||||||
Sbjct 1030 GGGGGGTTTGGTCCTGTCTTTAAAGGCACACTTTCAGGTTCAAATGCA-AAGATTGCTGT 1088
Query 1080 TAAACGGATCTCTCATGATTCAAGACAAGGAATGCAG-GAATTCTTAGCAGAGATATCGA 1138
||||||| | |||||||| ||||| ||||||||| || ||||| || || ||||| ||||
Sbjct 1089 TAAACGGGTTTCTCATGACTCAAGTCAAGGAATG-AGAGAATTATTGGCCGAGATTTCGA 1147
Query 1139 CAATTTGTCGGCTTAGACACCCAAACCTAGTCAGGCTTCAGGGTTACTGTAGGTACAAGG 1198
| ||| |||||||||||||||| || ||||||||||||| ||||| || || ||||| |
Sbjct 1148 CTATTGGTCGGCTTAGACACCCCAATCTAGTCAGGCTTCTTGGTTATTGCAGATACAAAG 1207
Query 1199 AGGAGCTTTACTTGGTTTATGACTTTATGCCCAATGGAAGTCTTGACAAGTAC 1251
| ||||| |||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct 1208 AAGAGCTCTACTTGGTTTATGACTTTCTGCCCAATGGAAGCCTTGACAAGTAC 1260
> AT2G43700.1 | Symbols: | Concanavalin A-like lectin protein
kinase family protein | chr2:18115092-18118844 FORWARD LENGTH=3207
Length=3207
Score = 1166 bits (631), Expect = 0.0
Identities = 1029/1218 (84%), Gaps = 40/1218 (3%)
Strand=Plus/Plus
Query 54 TGAAAACTCACTTGGCAGGCTTGTTTTTG-AGGGATCCACTGGGA-TTATTAATGGTTTC 111
||||||||| | ||||| | || || || |||||||| || ||| || |||| |||| |
Sbjct 945 TGAAAACTCCCGTGGCAAAC-TGGTTATGCAGGGATCCGCT-GGATTTTTTAAAGGTTAC 1002
Query 112 CCAATGTTGACAAACACCAAGAAGCACGTC-TATGGTCAAGCCTTCGATGACGAGCCATT 170
| |||||| | |||||||||||||| | ||||||||||||||||| |||||| | |
Sbjct 1003 AGGACGTTGACGAGCACCAAGAAGCACG-CATATGGTCAAGCCTTCGAGGACGAGATAGT 1061
Query 171 CCCTTTCAAGAATTCGACCAACGGTAACA-TGACTTCGTTT-TCTTTTACCTTCTTCTTT 228
|||||||||||||||| |||||| | ||| | ||||| ||| ||| | || |||||||||
Sbjct 1062 CCCTTTCAAGAATTCGGCCAACGAT-ACAGTTACTTC-TTTCTCTGTCACGTTCTTCTTT 1119
Query 229 GCTATCGTCCCTG-GGCATAGAG-A-AAGAGGCTCTCACGGTATGGCCTTCGTGATCTCG 285
||||||| ||||| || ||| || | || |||| |||| ||||||||||||||||||||
Sbjct 1120 GCTATCGCCCCTGAGG-ATA-AGCACAA-AGGCGCTCATGGTATGGCCTTCGTGATCTCT 1176
Query 286 CCTACAAGAGGCCTTCCAGGTGCTTTTGCTGATCAGTACCTCGGAATATTCAACGATA-C 344
|| ||||||||| || | ||||| | |||||||||||||| ||||| || ||| | | |
Sbjct 1177 CCCACAAGAGGCATTACTGGTGCCTCCGCTGATCAGTACCTTGGAATCTTTAAC-AAAGC 1235
Query 345 AGACAATGGAAAAAGCTCGAATCATGTCATTGCTGTGGAGCTCGATATACATAAAGATGA 404
| |||| || | ||||| ||||||||||| |||||||||||||||||| ||||||||||
Sbjct 1236 AAACAACGGGGATAGCTCAAATCATGTCATCGCTGTGGAGCTCGATATAAATAAAGATGA 1295
Query 405 TGAATTTGGTGACGTTAATGATAACCACGTTGGTATTAACATTAATGGAATGAGATCTAA 464
|||||||| ||| |||| |||||||| |||||||| ||||| || |||||||| ||||
Sbjct 1296 GGAATTTGGCGACATTAACGATAACCATGTTGGTATCAACATAAACGGAATGAGGTCTAT 1355
Query 465 CATATCTGCTCCTGCCGGGTATTTTGATCAA-AAGGGTCAGTTCAAAAG-CCTTTCTCTA 522
|| || ||||||||| || |||| ||||||| || ||||| || |||| |||||| |
Sbjct 1356 CAAATTTGCTCCTGCTGGTTATTATGATCAAGAA-GGTCAATT-TAAAGATCTTTCTTTG 1413
Query 523 ATCAGTGGAAATCTACTCCGAGTCACGATTTTGTATAGCCAGGa-aaaaaaaCAGCTTAG 581
|| ||||||| |||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 1414 ATAAGTGGAAGTCTACTCCGAGTCACGATTTTGTATAGCCA-GATGGAAAAACAGCTTAA 1472
Query 582 CGTCACCTTATCATCACCAGAGGAGGCTTATTACCCGAATC-AGCCACTTCTATT-ACTG 639
|||||||||||||||||||||||||||||||||||||| | |||| ||||| || | ||
Sbjct 1473 TGTCACCTTATCATCACCAGAGGAGGCTTATTACCCGAA-CAAGCCTCTTCT-TTCATTG 1530
Query 640 AACCAAGATCTGTCACCGTAT-TTGTTGGAGAAAATGTATCTCGGCTACACTGCCTCCAC 698
||||||||||| ||||| ||| || |||||||| |||||| | |||| | | ||||| ||
Sbjct 1531 AACCAAGATCTATCACCCTATATT-TTGGAGAACATGTATGTGGGCTTCTCAGCCTCAAC 1589
Query 699 AGGTTCGGTTGGAGCATTACATTACATATGGACGTTACATGTGT--ATGATATCGCTG-T 755
|| || ||| ||||| | |||||||| | || ||| | ||| ||| || || |
Sbjct 1590 GGGGTCTGTTAGAGCAATGCATTACATGTTGA-GTT-GGTTTGTACATGGCGGCGTTGAT 1647
Query 756 GGTTCCAGATCTGGATTTCCCTATACCGACGTTTCCTCCATATCCCAAGCCAAAGTCTCA 815
|||||| | ||||| || ||||| || |||||||||||||||||| ||| ||||
Sbjct 1648 -GTTCCAAACCTGGACTTGGGAATACCAACATTTCCTCCATATCCCAAGGAAAAATCTCT 1706
Query 816 GG-TAAGACGGACTGTCTTGGTGACTTGCTTGACATTGGTCCTCTTTGTTGCGGTTGCTG 874
|| | | |||| ||| |||||||| ||||| ||||||| |||||||||||| ||| ||
Sbjct 1707 GGTTTA-TCGGATTGTTTTGGTGACCAGCTTGGCATTGGTTCTCTTTGTTGCGCTTGTTG 1765
Query 875 CATCAGCTTTAAGTCTCTTCTTCTATAGAAGACATAAAAAGGTTAAGGAGGTTCTAGAGG 934
|||||||||||||| |||| ||||| || ||||||||||||||||| |||||||||||||
Sbjct 1766 CATCAGCTTTAAGTATCTTTTTCTACAGGAGACATAAAAAGGTTAAAGAGGTTCTAGAGG 1825
Query 935 AATGGGAGATCCAATGTGGGCCTCATAGGTTTGCTTACAAAGAACTCTTTAAAGCCACAA 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1826 AATGGGAGATCCAATGTGGGCCTCATAGGTTTGCTTACAAAGAACTCTTTAAAGCCACAA 1885
Query 995 AGGGTTTCAAACAACTTGTGGGCAAAGGAGGGTTCGGTCAGGTTTTTAAGGGTACACTTC 1054
| ||||||||||||||| | |||||||||||||| |||||||| ||||||||||||||||
Sbjct 1886 AAGGTTTCAAACAACTTCTAGGCAAAGGAGGGTTTGGTCAGGTCTTTAAGGGTACACTTC 1945
Query 1055 CAGGTTCAGACGCAGAAATTGCTGTTAAACGGATCTCTCATGATTCAAGACAAGGAATGC 1114
||||||| || ||||| ||||| |||||||| || || |||||||||| |||||||||||
Sbjct 1946 CAGGTTCTGATGCAGAGATTGCCGTTAAACGAATTTCACATGATTCAAAACAAGGAATGC 2005
Query 1115 AGGAATTCTTAGCAGAGATATCGACAATTTGTCGGCTTAGACACCCA-AACCTAGTCAGG 1173
|||||||||| || ||||||||||||||| ||||||||||||||| | ||||||||||||
Sbjct 2006 AGGAATTCTTGGCTGAGATATCGACAATTGGTCGGCTTAGACACC-AGAACCTAGTCAGG 2064
Query 1174 CTTCAGGGTTACTGTAGGTACAAGGAGGAGCTTTACTTGGTTTATGACTTTATGCCCAAT 1233
||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 2065 CTTCAGGGTTATTGTAGGTACAAGGAGGAACTCTACTTGGTTTATGACTTTATGCCCAAT 2124
Query 1234 GGAAGTCTTGACAAGTAC 1251
||||||||||||||||||
Sbjct 2125 GGAAGTCTTGACAAGTAC 2142
Score = 593 bits (321), Expect = 2e-168
Identities = 531/630 (84%), Gaps = 24/630 (4%)
Strand=Plus/Plus
Query 1285 TGGGTACAAGTCGTAATTCATCGAGATATCAAGCCTGCAAATGTCTTGATTGACCATCAG 1344
||||||||||| |||||||||||||| |||||||| ||||||||| |||||||||| ||
Sbjct 2239 TGGGTACAAGTTGTAATTCATCGAGACATCAAGCCGGCAAATGTCCTGATTGACCACCAA 2298
Query 1345 ATGAATGCGAGACTCGGGGATTTCGGGCTAGCCAAGTTGTACTATCAGGGTTATGATCCT 1404
|||||||| || ||||||||||| ||| | || ||||||||| |||||||||||||||||
Sbjct 2299 ATGAATGCAAGGCTCGGGGATTTTGGGTTGGCTAAGTTGTACGATCAGGGTTATGATCCT 2358
Query 1405 CAAACATCGAGAGTAGCTGGAACATT-TGGGTACATTGCCCCCGAGCTCATAAGAAGTGG 1463
|| ||||| ||||| ||||| ||||| | |||||||||| || |||||||||||||| ||
Sbjct 2359 CAGACATCTAGAGTTGCTGGGACATTCT-GGTACATTGCACCGGAGCTCATAAGAAGCGG 2417
Query 1464 AAGAGCAACCACAGGGACAGACGTCTACGCCTTTCGG-CTGTTTATACTGGAAGTCTCTT 1522
||||||||||||||||||||||||||| ||||| ||| |||||||| || ||||||||||
Sbjct 2418 AAGAGCAACCACAGGGACAGACGTCTATGCCTT-CGGGCTGTTTATGCTAGAAGTCTCTT 2476
Query 1523 GCGGTAGAAGGCTGATAGAGCCACGAGCAGCCACCAACGAGGTCGTCCTTGCAGAATGGA 1582
||||||| ||||||||||||| | || ||||| || ||||||||||||| || |||||||
Sbjct 2477 GCGGTAGGAGGCTGATAGAGCGAAGAACAGCCTCCGACGAGGTCGTCCTAGCTGAATGGA 2536
Query 1583 CATTAGAA-TGCTGGGAAAACGGAGATATCCTTAAGGCAGCCAATGAAAGACTCCACCAA 1641
||||| || |||||||||||||||||||| || |||||| |||||| || ||| ||
Sbjct 2537 CATTA-AAGTGCTGGGAAAACGGAGATATTCTCGAGGCAGTCAATGATGGAATCCGTCAC 2595
Query 1642 GAACACAATAGAGAACAGCTCGAGATTGTTCTGAAACTGGGAGTATTATGTTCGCACCAG 1701
||| |||||||||||||||||||| ||||| ||||| ||||||| || ||||||||||||
Sbjct 2596 GAAGACAATAGAGAACAGCTCGAGCTTGTTTTGAAATTGGGAGTGTTGTGTTCGCACCAG 2655
Query 1702 GTTGCAACAGTTAGGCCTGACATGTCTAAAGTGGTCCGGATCTTAAATGGTGAT-TCGAA 1760
| || | || ||||||| ||||||||||| ||||||| |||||| ||||||| | | |
Sbjct 2656 GCTGTAGCAATTAGGCCAGACATGTCTAAGGTGGTCCAGATCTTGGGTGGTGATCT-GCA 2714
Query 1761 GCTTCC-GAGTAATTTGCTGGATATTGTCAAGGCCGAGAGGGTTAGAATGTGGTCTGAGA 1819
|||||| || |||| | || ||||| ||||| || |||| ||| ||||||||||||||||
Sbjct 2715 GCTTCCAGA-TAATCTACTCGATATAGTCAAAGCAGAGAAGGTCAGAATGTGGTCTGAGA 2773
Query 1820 CATCTGATAGT--A-TTC---------CATCACA-GGAGTCCATCGGTACCTTGACATTT 1866
||||||| ||| | || ||||||| || |||||| ||||||||||| ||
Sbjct 2774 CATCTGAGAGTGTACTTGGTGTTTTGACATCACAAGG-GTCCATTGGTACCTTGACGTTA 2832
Query 1867 ACGGAACCTTTCACTTCCCACGGACGCTGA 1896
||||||||||| || |||| |||||||||
Sbjct 2833 ACGGAACCTTTTACCTCCCGGGGACGCTGA 2862
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 93875019150
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5