BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg902384
Length=1920
Score E
Sequences producing significant alignments: (Bits) Value
AT2G43700.1 | Symbols: | Concanavalin A-like lectin protein ki... 1188 0.0
AT2G43690.1 | Symbols: | Concanavalin A-like lectin protein ki... 957 0.0
> AT2G43700.1 | Symbols: | Concanavalin A-like lectin protein
kinase family protein | chr2:18115092-18118844 FORWARD LENGTH=3207
Length=3207
Score = 1188 bits (643), Expect = 0.0
Identities = 1019/1199 (85%), Gaps = 32/1199 (3%)
Strand=Plus/Plus
Query 1 ATGTCTCGTGTAATCATCTCACGAGTCATTTTCTTGATTCTTGCTTTGTTCTGTTGTACT 60
||||||||| |||| |||||| |||||||||||||| |||||| | ||||||||||||
Sbjct 886 ATGTCTCGTACAATCGGCTCACGGGTCATTTTCTTGATCCTTGCTCTCTTCTGTTGTACT 945
Query 61 GATAACTCCCATAGG-AAACTGATT-TGGGAAGGATCGGCTGGAGTTTTCAAAGGTTTCA 118
|| ||||||| | || |||||| || | | | ||||| |||||| |||| ||||||| ||
Sbjct 946 GAAAACTCCCGT-GGCAAACTGGTTAT-GCAGGGATCCGCTGGATTTTTTAAAGGTTACA 1003
Query 119 GGACGTTGACGAACACCACGAAGCACACATATGGTCAAGCATTCGACGACAAGCCATTCC 178
|||||||||||| ||||| ||||||| ||||||||||||| ||||| ||| || | |||
Sbjct 1004 GGACGTTGACGAGCACCAAGAAGCACGCATATGGTCAAGCCTTCGAGGACGAGATAGTCC 1063
Query 179 CTTTCAAGAATTTC--CTC-ACAGGTGCAATGACTTCTTTCTCTTTCACCTTCTTTTTTG 235
|||||||||| ||| | | || | | || | |||||||||||| |||| ||||| ||||
Sbjct 1064 CTTTCAAGAA-TTCGGC-CAAC-GATACAGTTACTTCTTTCTCTGTCACGTTCTTCTTTG 1120
Query 236 CTATCGTCCCTGAGCATAAGCACAAAGGCTCTCACGGTATGGCCTTCGTGATTTCTCCTA 295
|||||| ||||||| |||||||||||||| |||| ||||||||||||||||| ||||| |
Sbjct 1121 CTATCGCCCCTGAGGATAAGCACAAAGGCGCTCATGGTATGGCCTTCGTGATCTCTCCCA 1180
Query 296 CAAGAGGCATTCCAGGTGCATCCGCAGATCAGTACCTCGGAATCTTCAATGAAGTAAACA 355
||||||||||| | ||||| ||||| ||||||||||| |||||||| || ||| |||||
Sbjct 1181 CAAGAGGCATTACTGGTGCCTCCGCTGATCAGTACCTTGGAATCTTTAACAAAGCAAACA 1240
Query 356 ACGGGAACAACTCGAATCATGTCATCGCTGTGGAGCTCGATATAAATAAAGATGATGAAT 415
||||| | | ||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1241 ACGGGGATAGCTCAAATCATGTCATCGCTGTGGAGCTCGATATAAATAAAGATGAGGAAT 1300
Query 416 TTGGCGACATTAACGATAACCATGTTGGTATCAACATAAATGGGATGAGGTCTATTGTAT 475
|||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct 1301 TTGGCGACATTAACGATAACCATGTTGGTATCAACATAAACGGAATGAGGTCTATCAAAT 1360
Query 476 CTGCTCCTGCTGGTTATTATGATCAAGAGGGTCAATTCAGAA-ATCTTTCTTTGATCAGT 534
||||||||||||||||||||||||||| |||||||| | || ||||||||||||| |||
Sbjct 1361 TTGCTCCTGCTGGTTATTATGATCAAGAAGGTCAATTTA-AAGATCTTTCTTTGATAAGT 1419
Query 535 GGAAATCTACTCCGAGTCACGATTTTGTAT-GACCAGAAG-AAGAAAGAGCTTAGTGTCA 592
|||| ||||||||||||||||||||||||| | ||||| | || ||| |||||| |||||
Sbjct 1420 GGAAGTCTACTCCGAGTCACGATTTTGTATAG-CCAGATGGAA-AAACAGCTTAATGTCA 1477
Query 593 CATTATCATCGCCAGAGGAAGCTTATTACCCCAAGCAA-CCACTTCTTTCGCTAAACCAA 651
| |||||||| |||||||| ||||||||||| || ||| || |||||||| | ||||||
Sbjct 1478 CCTTATCATCACCAGAGGAGGCTTATTACCCGAA-CAAGCCTCTTCTTTCATTGAACCAA 1536
Query 652 GATCTGTCACCGTATCTTTTGGAGAAAATGTATGTCGGCTTCACAGCCTCTACGGGGTCG 711
||||| ||||| ||| |||||||||| |||||||| |||||| ||||||| ||||||||
Sbjct 1537 GATCTATCACCCTATATTTTGGAGAACATGTATGTGGGCTTCTCAGCCTCAACGGGGTCT 1596
Query 712 GTTGGAGCAATGCACTACATGTCGATTTGGTATAG-ATATACCATAC-T-GATTGTTCCA 768
||| |||||||||| ||||||| || ||||| | | | || | | | ||| ||||||
Sbjct 1597 GTTAGAGCAATGCATTACATGTTGAGTTGGTTT-GTACATGGCGG-CGTTGAT-GTTCCA 1653
Query 769 GACCTGGA-TATCGGGA-TCCCGACGTTTCCTCCATACCCCAAGGAAAAATCACTGGTAA 826
||||||| | | |||| | || || ||||||||||| |||||||||||||| |||||
Sbjct 1654 AACCTGGACT-T-GGGAATACCAACATTTCCTCCATATCCCAAGGAAAAATCTCTGGTTT 1711
Query 827 ATCGCATTCTTTGGGTGACCGGCTTGGCATTGGCTCTCTTAGTTGCGATGGCTGCATCAG 886
|||| ||| ||| ||||||| |||||||||||| |||||| |||||| | | ||||||||
Sbjct 1712 ATCGGATTGTTTTGGTGACCAGCTTGGCATTGGTTCTCTTTGTTGCGCTTGTTGCATCAG 1771
Query 887 GTTTTAGTCTCTTCTTATATAGAAAAAACCAAATGGTTCAAGAGGTTCTAGAGGAGTGGG 946
||| ||| |||| || || || | | | ||| |||| |||||||||||||||| ||||
Sbjct 1772 CTTTAAGTATCTTTTTCTACAGGAGACATAAAAAGGTTAAAGAGGTTCTAGAGGAATGGG 1831
Query 947 AGATTCAAAATGGACCTCATAGGTTTTCTTACAAAGAACTCTTTAAAGCCACAAATGGTT 1006
|||| ||| ||| |||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct 1832 AGATCCAATGTGGGCCTCATAGGTTTGCTTACAAAGAACTCTTTAAAGCCACAAAAGGTT 1891
Query 1007 TCAAACAACTTCTAGGCAAAGGAGGGTTCGGTCAGGTCTTTAAGGGAACACTTCCAGGTT 1066
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 1892 TCAAACAACTTCTAGGCAAAGGAGGGTTTGGTCAGGTCTTTAAGGGTACACTTCCAGGTT 1951
Query 1067 CCGATGCAAATATTGCTGTTAAACGGGTTTCTCATGGTTCGAGTCAAGGAATG-AGAGAA 1125
| |||||| | ||||| |||||||| |||| |||| ||| | ||||||||| || |||
Sbjct 1952 CTGATGCAGAGATTGCCGTTAAACGAATTTCACATGATTCAAAACAAGGAATGCAG-GAA 2010
Query 1126 TTCTTGGCCGAGATAGCAACTATTGGTCGGCTTAGACACCCA-AATCTAGTGAGGCTTC 1183
|||||||| |||||| | || ||||||||||||||||||| | || ||||| |||||||
Sbjct 2011 TTCTTGGCTGAGATATCGACAATTGGTCGGCTTAGACACC-AGAACCTAGTCAGGCTTC 2068
> AT2G43690.1 | Symbols: | Concanavalin A-like lectin protein
kinase family protein | chr2:18112589-18114583 FORWARD LENGTH=1995
Length=1995
Score = 957 bits (518), Expect = 0.0
Identities = 921/1111 (83%), Gaps = 45/1111 (4%)
Strand=Plus/Plus
Query 112 GGTTTCAGGACGTTGACGAACACCACGAAGCACACATATGGTCAAGCATTCGACGACAAG 171
||||||| ||||||||| ||||||| ||| ||| | ||||||||||| ||| | ||| ||
Sbjct 115 GGTTTCACGACGTTGACAAACACCAAGAAACACGCCTATGGTCAAGCCTTCAATGACGAG 174
Query 172 CCATTCCCTTTCAAGAATTTC-CTC-ACAGGTGCA-ATGACTTC-TTTCTC-TTTCACCT 226
||||||||||||||||| ||| || || ||| | |||||||| ||| || ||| ||||
Sbjct 175 CCATTCCCTTTCAAGAA-TTCGGTCAAC-GGT-AACATGACTTCGTTT-TCATTT-ACCT 229
Query 227 TCTTTTTTGCTATCGTCCCTGAGCATA-AGCACAAAGGCTCTCACGGTATGGCCTTCGTG 285
|||| |||||||||||||||||||||| || ||||||| ||||||||||| ||||| |||
Sbjct 230 TCTTCTTTGCTATCGTCCCTGAGCATATAG-ACAAAGGTTCTCACGGTATAGCCTTTGTG 288
Query 286 ATTTCTCCTACAAGAGGCATTCCAGGTGCATCCGCAGATCAGTACCTCGGAATCTTCAAT 345
|| ||||| || ||||||||||| ||||||||||| ||||||||||| || ||||||||
Sbjct 289 ATCTCTCCCACGAGAGGCATTCCTGGTGCATCCGCTGATCAGTACCTTGGTATCTTCAAC 348
Query 346 GA-AGTAAACAACGGGAACAACTCGAATCATGTCATCGCTGTGGAGCTCGATATAAATAA 404
|| | ||| | || || | ||| || ||| |||| ||||||||||| |||||| ||||
Sbjct 349 GATA-CAAATGATGGAAATAGCTCCAACCATATCATTGCTGTGGAGCTTGATATACATAA 407
Query 405 AGATGATGAATTTGGCGACATTAACGATAACCATGTTGGTATCAACATAAATGGGATGAG 464
||| ||||||||||| |||||| | |||||||||||||||||||| || ||||| |||||
Sbjct 408 AGACGATGAATTTGGTGACATTGATGATAACCATGTTGGTATCAATATTAATGGTATGAG 467
Query 465 GTCTATTGTATCTGCTCCTGCTGGTTATTATGATCAAGAGGGTCAATTCAGAAATCTTTC 524
|||||||||||||||||||| ||||||||||||||| | ||||| |||| |||||||||
Sbjct 468 ATCTATTGTATCTGCTCCTGCCGGTTATTATGATCAAAATGGTCAGTTCAAAAATCTTTC 527
Query 525 TTTGATCAGTGGAAATCTACTCCGAGTCACGATTTTGTAT-GACCAG-AAGAAGAAAGAG 582
||| |||||||||||||||||||||||||||||||||||| | |||| ||||| ||| ||
Sbjct 528 TTTAATCAGTGGAAATCTACTCCGAGTCACGATTTTGTATAG-CCAGGAAGAA-AAACAG 585
Query 583 CTTAGTGTCACATTATCATC-GCCAGAGGAAGCTTAT-TACCCCAAGCAACCACTTCTTT 640
|||| |||||| |||||| | || |||||||||| || | ||| ||| || |||||||
Sbjct 586 CTTAATGTCACCTTATCACCAGC-AGAGGAAGCTAATGT-CCCAAAGTGGCCTCTTCTTT 643
Query 641 CGCTAAACCAAGATCTGTCACCGTATCTTTTGGAGAAAATGTATGTCGGCTTCACAGCCT 700
| || ||| ||||| ||||||||||||||| |||| |||||| ||||||||||||| |
Sbjct 644 CACTGAACAAAGATTTGTCACCGTATCTTTCAAAGAATATGTATATCGGCTTCACAGCTT 703
Query 701 CTACGGGGTCGGTTGGAGCAATGCACTACATGTCGATTTGGTATAG-ATATACCAT-ACT 758
| || |||||||| |||||||| || ||||||| ||| |||||| | || |||| | | |
Sbjct 704 CCACTGGGTCGGTCGGAGCAATACATTACATGTGGATGTGGTAT-GTATTTACCTTTATT 762
Query 759 GATTGTTCCAGACCTGGATATCGGGATCCCGACGTTTCCTCCATACCCCAAGGAAAAATC 818
||||||||| | |||||| | | || || || ||||||||||| ||||||| | | ||
Sbjct 763 -ATTGTTCCAAAACTGGATTTTGATATACCAACCTTTCCTCCATATCCCAAGGCAGAGTC 821
Query 819 ACTGGTAAATC-GC-A-TTCTTTGGGTGACCGG-CTTGGCATTGGCTCTCTTAGTTGCGA 874
| |||||| | | | ||||| | |||| | |||| | ||||||||||| ||||||
Sbjct 822 TCAGGTAAAGCTGATAGTTCTT-G--TGAC-GTTCTTGACTTTGGCTCTCTTTGTTGCGC 877
Query 875 TGGCTGCATCAGGTTTTAGTCTCTTCTTATATA-GAAA-A-AACCAAA-TGGTTCAAGAG 930
| |||||||||| ||| | | | ||||| |||| || | | || ||| | || |||
Sbjct 878 TTGCTGCATCAGCTTTAATTGTTTTCTTCTATAAGAGACATAAG-AAACTT-TTG--GAG 933
Query 931 GTTCTAGAGGAGTGGGAGATTCAAAA-TGGACCTCATAGGTTTTCTTACAAAGAACTCTT 989
||||| ||||| ||||| | || || |||||| ||||||||||||||||||||||||||
Sbjct 934 GTTCTCGAGGAATGGGA-AGTCGAATGTGGACCACATAGGTTTTCTTACAAAGAACTCTT 992
Query 990 TAAAGCCACAAATGGTTTCAAACAACTTCTAGGCAAAGGAGGGTTCGGTCAGGTCTTTAA 1049
|| |||||||||||||||||||||||||| ||| |||| ||||| |||| ||||||||
Sbjct 993 CAATGCCACAAATGGTTTCAAACAACTTCTCGGCGAAGGGGGGTTTGGTCCTGTCTTTAA 1052
Query 1050 GGGAACACTTCCAGGTTCCGATGCAAATATTGCTGTTAAACGGGTTTCTCATGGTTCGAG 1109
|| |||||| ||||||| ||||||| ||||||||||||||||||||||||| || ||
Sbjct 1053 AGGCACACTTTCAGGTTCAAATGCAAAGATTGCTGTTAAACGGGTTTCTCATGACTCAAG 1112
Query 1110 TCAAGGAATGAGAGAATTCTTGGCCGAGATAGCAACTATTGGTCGGCTTAGACACCCAAA 1169
|||||||||||||||||| ||||||||||| | ||||||||||||||||||||||| ||
Sbjct 1113 TCAAGGAATGAGAGAATTATTGGCCGAGATTTCGACTATTGGTCGGCTTAGACACCCCAA 1172
Query 1170 TCTAGTGAGGCTTCTTGGCTACTGCAG-TAC 1199
|||||| ||||||||||| || ||||| |||
Sbjct 1173 TCTAGTCAGGCTTCTTGGTTATTGCAGATAC 1203
Score = 730 bits (395), Expect = 0.0
Identities = 619/726 (85%), Gaps = 20/726 (3%)
Strand=Plus/Plus
Query 1195 AGTACCTCTATGGCGGATCAGATCAAGAACAGTTCTCTTGGACTCAACGTTTCAAAGATC 1254
||||||| || || |||||||||| |||| ||||||||| |||||||||| ||||||
Sbjct 1256 AGTACCTTTACGGAACATCAGATCAAAAACAACTCTCTTGGAGTCAACGTTTC-AAGATC 1314
Query 1255 ATCAAAGACGTTGCCTCTGCACTCTCCTATCTCCAT-ATCGACTGGGTACAAGTTGTTAT 1313
|||||||| || |||||||||||||||||||||||| || | ||| |||| || || ||
Sbjct 1315 ATCAAAGATGTAGCCTCTGCACTCTCCTATCTCCATCAT-GGGTGGATACATGTCGTCAT 1373
Query 1314 TCATCGAGACATCAAGCCTGCAAATGTCCTAATCGACGACAAGATGAATGCAAGTCTTGG 1373
|||| ||||||||||||| ||||| || |||||||| |||||||||||||||||||||||
Sbjct 1374 TCATAGAGACATCAAGCCAGCAAACGTGCTAATCGATGACAAGATGAATGCAAGTCTTGG 1433
Query 1374 AGATTTCGGATTGGCTAAGCTGTATGATCAAGGATTTGATCCTCAAACCTCTATG-GTAG 1432
||||||||||||||||||| | ||||||||||||| ||||||||||||||||| | ||||
Sbjct 1434 AGATTTCGGATTGGCTAAGGTATATGATCAAGGATATGATCCTCAAACCTCTA-GAGTAG 1492
Query 1433 CTGGAACCTTCGGGTATATGGCACCAGAGCTCATGAGAACTGGAAGATCGACCACGGGTA 1492
||||||| |||||||| ||||| |||||| |||||||||| |||||| | || | ||| |
Sbjct 1493 CTGGAACATTCGGGTACATGGCGCCAGAGATCATGAGAACCGGAAGACCAACTATGGGAA 1552
Query 1493 CAGATGTCTATGCCTTTGGTGTGTTTATGCTTGAAGTTTCTTGCGGTAGAAAACTGTTTG 1552
| ||||| || || |||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct 1553 CGGATGTTTACGCTTTTGGTATGTTTATGCTTGAAGTTTCTTGCGATAGAAAACTGTTTG 1612
Query 1553 AGTCACAAGCAGAGCCCGAAGAGG-TCGTTCTTGC-AGACTGGGCGATAAATCGTTGGGA 1610
|| ||| ||||||| | ||||||| | ||||| | | |||||||||||||| |||||||
Sbjct 1613 AGCCACGAGCAGAGTCGGAAGAGGCTA-TTCTTACTA-ACTGGGCGATAAATTGTTGGGA 1670
Query 1611 AAACGGTGATATTGTAGAGGCGGCTAATGAAAGCATCCGAGAAGATCATGACAAGGGACA 1670
||||||||||||||||||||| |||| |||||| |||||| ||||| |||| ||||||||
Sbjct 1671 AAACGGTGATATTGTAGAGGCAGCTACTGAAAGAATCCGACAAGATAATGATAAGGGACA 1730
Query 1671 GCTTGAGCTTGTTCTGAAGCTAGGAGTGTTATGCTCGCAC-AGGGATGAAGAGATTAGGC 1729
||| ||||||||||||||||||||||||||||| ||||| ||| ||||||| ||||||
Sbjct 1731 GCTCGAGCTTGTTCTGAAGCTAGGAGTGTTATGTTCGCATGAGGC-TGAAGAGGTTAGGC 1789
Query 1730 CGGATATGGCTACGGTGGTTAAGATCTTGAACGGAGTTTCTGAGCTTCCGGATAATCTTC 1789
||||||||||||| || |||||||| ||||||||||||||||||||||||||||| || |
Sbjct 1790 CGGATATGGCTACAGTTGTTAAGATTTTGAACGGAGTTTCTGAGCTTCCGGATAACCTGC 1849
Query 1790 TCGACATTGTTAGAACGGAGAAATTGGGAAGAT-GGTACGATGCG-TACGG-AAACGTGC 1846
| || ||||||||| | ||||| |||| || || ||||||| | | ||| | ||| ||
Sbjct 1850 TTGATATTGTTAGATCCGAGAAGTTGGAAA-ATTGGTACGA-GAGGTACAGCAAA-GTAA 1906
Query 1847 TTGTTAGGGCGATTACA-ATGGAATCTGCAGGTAACTTGACGATTACGGAACCGATGACT 1905
||| | || || || | ||| || |||||||||| | |||||||||||||| |||
Sbjct 1907 TTGATCCGGTGACAACGGA-GGAGTCCATAGGTAACTTGGCCATTACGGAACCGAT-ACT 1964
Query 1906 TCCGTC 1911
||||||
Sbjct 1965 TCCGTC 1970
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 95079832230
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5