BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg902410

Length=492
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G04070.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfam...   691    0.0  


> AT5G04070.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily 
protein | chr5:1102090-1104446 FORWARD LENGTH=1482
Length=1482

 Score =  691 bits (374),  Expect = 0.0
 Identities = 452/489 (92%), Gaps = 8/489 (2%)
 Strand=Plus/Plus

Query  11   TGAAGGAGGCGTTGCGTTTTATATGCTCATCTAATTTCTGGAGGATGGCTT-TGTTTTGG  69
            |||||||||| ||||||||||| ||||||||||||||||||||||||| || ||||||||
Sbjct  159  TGAAGGAGGCTTTGCGTTTTATCTGCTCATCTAATTTCTGGAGGATGG-TTCTGTTTTGG  217

Query  70   AACATTGCCCTCCTTTTTTCTTACTTCCAATTGCTTAAAAAGAGTATCTTTGGCTCAAAA  129
            |||||||||||||||||||| ||||| ||||||||||||||||||||||||| | | |||
Sbjct  218  AACATTGCCCTCCTTTTTTCGTACTTTCAATTGCTTAAAAAGAGTATCTTTGCCCCCAAA  277

Query  130  TCAAGTT-C-C-TCTTCTTGCTCCAAATCCAATCATTCACACACACCTATTTGTGTTATC  186
            ||||||| | | |||||||||||||||| ||||||||||||||||||| |||||||||| 
Sbjct  278  TCAAGTTCCTCTTCTTCTTGCTCCAAATTCAATCATTCACACACACCTGTTTGTGTTATA  337

Query  187  ACTGGTGCTACTTCGGGACTTGGTAAGGCCACTGCGTTTGCTCTATCAAGGAAAGGTTTC  246
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct  338  ACTGGTGCTACTTCGGGACTTGGTAAGGCCACTGCGTTTGCTCTTTCAAGGAAAGGTTTC  397

Query  247  TACGTTGTTC---TTGGAAGATCATCCCACTTACTATCAAAGACCTTGAGTGATATTAAG  303
            ||||||||||   ||||| | || || |||||||||||||||||||||||||||||||||
Sbjct  398  TACGTTGTTCTTGTTGGACGGTCCTCGCACTTACTATCAAAGACCTTGAGTGATATTAAG  457

Query  304  AGGCAGAATGAGAATGCCCAACTCAAAGCTTTTGAAGTTGACATTTCGTCTTTTCAATCA  363
            |||||||| ||| ||||| ||||||||||||||||||||||||| ||||||||||||| |
Sbjct  458  AGGCAGAACGAGGATGCCAAACTCAAAGCTTTTGAAGTTGACATGTCGTCTTTTCAATTA  517

Query  364  GTTTTCAAGTTCAGAAACTCTCTAGAGCAATGGCTTTTAGATTCAGATTTACGTTCTTCA  423
            ||||| |||||||||| ||||||||||||||||||||| || |||||||| | |||||||
Sbjct  518  GTTTTAAAGTTCAGAAGCTCTCTAGAGCAATGGCTTTTTGAGTCAGATTTGCATTCTTCA  577

Query  424  GTCCAGCTTTTGGTGAACAATGCTGGAATACTGGCAACATCTAGTCGGCCAACCATTGAA  483
            ||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||
Sbjct  578  GTCCAGCTTTTGGTGAACAATGCTGGAATACTGGCAACATCTAGTCGTCCAACTGTTGAA  637

Query  484  GGCTTTGAC  492
            |||||||||
Sbjct  638  GGCTTTGAC  646



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 23459346649


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5