BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg902495

Length=378
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G44030.1 | Symbols:  | Galactose oxidase/kelch repeat superf...   106    2e-22


> AT2G44030.1 | Symbols:  | Galactose oxidase/kelch repeat superfamily 
protein | chr2:18220086-18221228 FORWARD LENGTH=1143
Length=1143

 Score =  106 bits (57),  Expect = 2e-22
 Identities = 67/72 (93%), Gaps = 0/72 (0%)
 Strand=Plus/Plus

Query  55   ATGAGGAAATCATCATCAGAGTCGTCTCCCAAGTCGTTTTTGTCTTTACCCTACGACGTT  114
            ||||||  ||||||||||||||||||||||||||||||| |||| ||||| |||||||||
Sbjct  19   ATGAGGTCATCATCATCAGAGTCGTCTCCCAAGTCGTTTCTGTCGTTACCGTACGACGTT  78

Query  115  GTTTTCAACTGT  126
            ||||||||||||
Sbjct  79   GTTTTCAACTGT  90



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 17794783146


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5