BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg902531 Length=1854 Score E Sequences producing significant alignments: (Bits) Value AT2G44990.1 | Symbols: CCD7, MAX3, ATCCD7 | carotenoid cleavage... 2760 0.0 > AT2G44990.1 | Symbols: CCD7, MAX3, ATCCD7 | carotenoid cleavage dioxygenase 7 | chr2:18558938-18561621 FORWARD LENGTH=1890 Length=1890 Score = 2760 bits (1494), Expect = 0.0 Identities = 1699/1798 (94%), Gaps = 13/1798 (1%) Strand=Plus/Plus Query 1 ATGTCTCTCCCTATCCCGCCGAAATTTCTTCTACCGCTAAAATCTCCACCGATTCATCAT 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1 ATGTCTCTCCCTATCCCGCCGAAATTTCTTCCACCGCTAAAATCTCCACCGATTCATCAT 60 Query 61 CACCAAGCTCCGCCACCGCTTGCACCGCCACGAGCCGCAATATCAATATCTATACCAGAA 120 |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 61 CACCAAACTCCGCCACCGCTTGCACCTCCACGAGCCGCAATATCAATATCTATACCAGAC 120 Query 121 ACCGGTTTAGGACGTACGGGAACCATCATCGACGAGTCCACGTCATCAGCTTTCCGTGAC 180 ||||||||||||||||| || |||||| |||||||||||||||| |||||||||||||| Sbjct 121 ACCGGTTTAGGACGTACCGGTACCATCCTCGACGAGTCCACGTCTTCAGCTTTCCGTGAT 180 Query 181 TACCAATCTTTATTCGTATCACAACGCTCCGAGAC-AGTCGAACCGGTCGTAATTAAACC 239 ||||||||||||||||| |||||||| |||||||| | |||||||||||||||||||||| Sbjct 181 TACCAATCTTTATTCGTGTCACAACGTTCCGAGACTA-TCGAACCGGTCGTAATTAAACC 239 Query 240 AATCGATGGCTCAATACCGGTTGATTTCCCTTCCGGTACGTATTACTTAGCCGGTCCAGG 299 |||||| || |||||||||||| | |||||||||||||| || ||||||||||||||||| Sbjct 240 AATCGAAGGTTCAATACCGGTTAACTTCCCTTCCGGTACATACTACTTAGCCGGTCCAGG 299 Query 300 ACTATTCACTGACGACCATGGCTCAACGGTCCATCCTTTAGACGGTCACGGTTATCTCCG 359 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 300 ACTATTTACTGACGACCATGGCTCAACGGTTCATCCTTTAGACGGTCACGGTTATCTCCG 359 Query 360 TGCGTTTCACATCGACGGTAATAAACGAAAAGCCACTTTCACGGCGAAGTATGTTAAAAC 419 ||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct 360 TGCGTTTCACATCGACGGTAACAAACGGAAAGCCACTTTCACGGCGAAGTACGTTAAAAC 419 Query 420 AGAAGCTAAAGAAGAAGAGCACGATCCTGTAACTGACACGTGGCGGTTCACTCATAGAGG 479 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 420 GGAAGCTAAAAAAGAAGAGCACGATCCTGTAACTGACACGTGGCGGTTCACTCATAGAGG 479 Query 480 TCCTTTCTCTGTGTTAAAAGGCGGGAAAAGATTTGGAAACACGAAAGTGATGAAAAACGT 539 ||||||||| ||||| ||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 480 TCCTTTCTCGGTGTTGAAAGGAGGGAAGAGATTTGGAAACACGAAAGTGATGAAAAACGT 539 Query 540 GGCCAATACTAGCGTTTTGAAATGGGCTGGGCGGTTGCTTTGTTTATGGGAAGGTGGTGA 599 ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 540 GGCTAATACTAGCGTTTTGAAATGGGCTGGGCGATTGCTTTGTTTATGGGAAGGTGGTGA 599 Query 600 ACCGTACGAGATTGAATCGGGATCGTTGGATACCGTCGGGAGATTTAACGTCGAGATCAA 659 |||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||| Sbjct 600 ACCGTACGAGATTGAATCTGGATCGTTGGATACCGTCGGAAGATTTAACGTCGAGAACAA 659 Query 660 CGGTTGtg-atgatgatgatgatgGTGATTCTTCCGACAGAGATTTATCTGGTCATGATA 718 |||||||| || || |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 660 CGGTTGTGAATCTTG-TGATGATGATGATTCTTCCGACAGAGATTTATCTGGTCATGATA 718 Query 719 TATGGGACACAGCCGCAGATTTGTTGAAACCCATACTTCAAGGAGTATTTAAGATGCCAC 778 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 719 TATGGGACACAGCCGCAGATTTGTTGAAACCCATACTTCAAGGTGTATTTAAGATGCCAC 778 Query 779 CGAAACGGTTCTTGTCACATTACAAAGTCGACGGTCGAAGAAATAGACTTTTAACGGTCA 838 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 779 CGAAACGGTTCTTGTCACATTACAAAGTCGACGGTCGAAGAAAAAGACTTTTAACGGTCA 838 Query 839 CTTGCAACGCTGAAGATATGCTTTTACCTCGAAGCAACTTCTCATTTTGTGAGTATGATT 898 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 839 CTTGCAACGCTGAAGATATGCTTTTACCTCGAAGCAACTTCACATTTTGTGAGTATGATT 898 Query 899 CGGAATTCAAGTTGATACAAACGAGAGAATTCAAGATCGATGATCACATGATGATTCATG 958 |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 899 CGGAATTCAAGTTGATACAAACGAAAGAATTCAAGATCGATGATCATATGATGATTCATG 958 Query 959 ATTGGGCATTCACGGACACTCACTACATACTATTTGCCAACCGAGTCAAGCTTGATCCAC 1018 |||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||| Sbjct 959 ATTGGGCATTCACGGATACTCACTACATACTCTTTGCCAACCGAGTCAAGCTTAATCCAA 1018 Query 1019 TTGGTTCCATAGCGGCTATGTGCGGCATGTCACCGATGGTATCAGCGTTATCGTTGAACC 1078 | ||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||| Sbjct 1019 TAGGTTCCATAGCGGCTATGTGCGGAATGTCACCAATGGTATCAGCGTTATCGTTAAACC 1078 Query 1079 CTAGCAACGAGAGTTCCCCGATTTATATTCTCCCTAGGTTTTCTGAGAAAT---CTATGG 1135 | |||||||||||||| ||||||||||||||||||||||||||||| |||| ||| || Sbjct 1079 CAAGCAACGAGAGTTCTCCGATTTATATTCTCCCTAGGTTTTCTGATAAATATTCTAGGG 1138 Query 1136 G-GGATCGAGACTGGAGAGTTCCTGTCGAAGTGTCTTCTCAATTGTGGCTAATACACTCC 1194 | || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1139 GAGG-TCGAGACTGGAGAGTTCCTGTCGAAGTGTCTTCTCAATTATGGCTAATACACTCC 1197 Query 1195 GGAAACGCTTATGAGACTAGAGAGGATAACGGCGATTTAAAGATTCAGATACAAGCGTCT 1254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1198 GGAAACGCTTATGAGACTAGAGAGGATAACGGCGATTTAAAGATTCAGATACAAGCTTCC 1257 Query 1255 GCTTGTTCCTACC-AGTGGTTCGATTTCCAGAAAATGTTTGGCTATGATTGGCAAAGGAA 1313 |||||||| |||| | ||||||||||||||||||||||||||||||||||||||||| || Sbjct 1258 GCTTGTTCTTACCGA-TGGTTCGATTTCCAGAAAATGTTTGGCTATGATTGGCAAAGCAA 1316 Query 1314 CAATCTGGATCCTTCTGTTATGAATCTGAATCGCGGGGATGACAAACTACTCCCTCATCT 1373 ||| ||||||||||||||||||||||| || || || || |||||||||||||||||||| Sbjct 1317 CAAGCTGGATCCTTCTGTTATGAATCTAAACCGTGGCGACGACAAACTACTCCCTCATCT 1376 Query 1374 AGTTAAGGTGTCTATGACATTGGACTCTTTTGGCGATTGCAAGAGTTGTGATGTAGAGCC 1433 |||||||||||||||||| ||||||||| || | ||||| ||||||||||||||||| Sbjct 1377 AGTTAAGGTGTCTATGACTTTGGACTCTACCGGAAACTGCAATAGTTGTGATGTAGAGCC 1436 Query 1434 TCTAAACGGCTGGAACAAGCCATCAGATTTTCCGGTTATAAACTCATCCTGGTCCGGAAA 1493 ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1437 TCTAAACGGGTGGAACAAGCCGTCAGATTTTCCGGTTATAAACTCATCCTGGTCCGGAAA 1496 Query 1494 AAAGAACAAGTACATGTACTCTGCAGCCTCTTCGGGAACTCGAGGTGAACTTCCCCATTT 1553 |||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||| Sbjct 1497 AAAGAACAAGTACATGTACTCTGCTGCCTCGTCGGGAACTCGAAGTGAACTTCCCCATTT 1556 Query 1554 CCCATTCGACATGGTCGTGAAGTTTGACTTAGACTCAAACCTCGTCCGTACTTGGTCTAC 1613 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1557 TCCATTCGACATGGTCGTGAAATTTGACTTAGACTCAAACCTCGTCCGTACTTGGTCTAC 1616 Query 1614 CGGGGCTAGAAGATTCGTTGGTGAGCCCATGTTTGTCCCAAGAAAA-TCCGATGAAGAAG 1672 ||| ||||||||||||||||||||||||||||||||||||| |||| || | |||||||| Sbjct 1617 CGGAGCTAGAAGATTCGTTGGTGAGCCCATGTTTGTCCCAA-AAAACTCTGTTGAAGAAG 1675 Query 1673 GAGAAGAAGAGGACGATGGTTACATTCTCGTGGTTGAGTATGCGGTTTCGGTGGAGAGAT 1732 |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| Sbjct 1676 GAGAAGAAGAGGACGATGGTTACATTGTCGTGGTCGAGTATGCGGTTTCGGTGGAGAGAT 1735 Query 1733 GTTACCTTGTGATTTTGGATGCCAAGAAGATCGGTGAATCCGATGCGGTCGTGTCGAG 1790 ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1736 GTTACCTAGTGATTTTGGATGCTAAGAAGATCGGTGAATCCGATGCGGTCGTGTCGAG 1793 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 91766596260 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5