BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg902749
Length=1554
Score E
Sequences producing significant alignments: (Bits) Value
AT2G46950.1 | Symbols: CYP709B2 | cytochrome P450, family 709, ... 2433 0.0
AT2G46960.2 | Symbols: CYP709B1 | cytochrome P450, family 709, ... 953 0.0
> AT2G46950.1 | Symbols: CYP709B2 | cytochrome P450, family 709,
subfamily B, polypeptide 2 | chr2:19289138-19291614 REVERSE
LENGTH=2120
Length=2120
Score = 2433 bits (1317), Expect = 0.0
Identities = 1477/1556 (95%), Gaps = 4/1556 (0%)
Strand=Plus/Plus
Query 1 ATGGAGCTCCTGAGCACGATCAATCTCTTAGCAATAGCTCTAGTGCTCCTTGTAGTTCCG 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 239 ATGGAGCTCCTGAGCACGATCAATCTCTTAGCAATAGCTCTAGTGCTTCTTGTAGTTCCG 298
Query 61 AAGATATATGGAGCTTGTCGGATCCTTGTTTGGCGGCCATTGATGCTATCAAGAAAATTC 120
|||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||
Sbjct 299 AAGATATATGGAGCTTGTCGGATCCTTGTTTGGCGGCCATGGATGCTATCGAGAAGATTC 358
Query 121 AAGAAGCAAGGAATCTCAGGCCCAAAATACAGGATCTTGTACGGGAACCTCCGCGAGATT 180
||||||||||||||||| || |||||||||||||||||||| ||||||||||| ||||||
Sbjct 359 AAGAAGCAAGGAATCTCTGGTCCAAAATACAGGATCTTGTATGGGAACCTCCGAGAGATT 418
Query 181 AGGAAGGTGAAGAACGCAGCTAAGCTTAAGATTCTTGATCCAAACTCCAACGATATCGTC 240
|||||| ||||||||| ||||||||||| | |||||||||||||||||||||||||||||
Sbjct 419 AGGAAGATGAAGAACGAAGCTAAGCTTATGGTTCTTGATCCAAACTCCAACGATATCGTC 478
Query 241 CCTCGCCTTTTAGCTCATCTTCAGCAATGGATGTCTCAATACGGAGAGACTTTTCTTTAC 300
|||||| | ||| |||||||||||||||||| ||||||||| |||||||| |||||||||
Sbjct 479 CCTCGCGTCTTACCTCATCTTCAGCAATGGAAGTCTCAATATGGAGAGACCTTTCTTTAC 538
Query 301 TGGCAAGGTACAGAGCCAAGGTTATGCATCTCAGATCATGAGCTAGCGAAACAGATCTTA 360
|||||||| ||||| |||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 539 TGGCAAGGAACAGATCCAAGGTTGTGCATCTCAGATCATGAGCTCGCGAAACAGATCTTA 598
Query 361 TCGAACAAGTTTGGtttttttGCTAAATCAAAGACAAAACCTGAGATCCTTAAACTTGCT 420
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 599 TCGAACAAGTTTGTTTTTTTTTCTAAATCAAAGACAAAACCTGAGATCCTTAAACTTTCT 658
Query 421 GGTAATGGACTTATCTTCGCAAATGGTCTTGATTGGGTTCGGCATAGACGAATCTTAAAC 480
||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||
Sbjct 659 GGTAATGGACTTATCTTCGTAAATGGTCTTGATTGGGTTCGTCACAGACGAATCTTAAAC 718
Query 481 CCTGCATTCTCTATGGACAAACTCAAGCTCATGACCCAATTGATGGTGGATTGCACTTTG 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 719 CCTGCATTCTCTATGGACAAACTCAAGCTCATGACCCAATTGATGGTGGATTGCACTTTT 778
Query 541 AGAATGTTCGACGAGTGGGGAAAACAGAGGAATGGTGGCGAAACAGAGCAAGTGGTGTTG 600
||||||||| |||||| ||||||||||||||||| |||||||||||| | ||||||
Sbjct 779 AGAATGTTCCTTGAGTGGAAAAAACAGAGGAATGGTGTAGAAACAGAGCAATTTGTGTTG 838
Query 601 ATTAGCAGAGAGTTTAAGAGATTGACCGCTGATATCATAGCCACGGCTGCGTTTGGAAGC 660
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 839 ATTAGCAGAGAGTTTAAGAGATTGACCGCTGATATCATAGCGACGGCTGCGTTTGGAAGC 898
Query 661 AGTTATGCGGAAGGAATCGAAGTGTTTAAATCACAAATAGAGCTCCAAAAGTGTTGTGCT 720
||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||
Sbjct 899 AGTTATGCGGAAGGAATTGAAGTATTTAAATCACAATTAGAGCTCCAAAAGTGTTGTGCT 958
Query 721 GCTTCTCTTACTGACGTCTATTTCCCTGGAATCCAGTACCTTCCTACGCCTTCGAATCTT 780
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 GCTGCTCTTACTGACCTCTATTTCCCTGGAATCCAGTACCTTCCTACGCCTTCGAATCTT 1018
Query 781 CAAATATGGAAGCTTGATAGGAAAGTGAATAGCTCGACCAAAAGAATCATAGATGCGAGG 840
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 1019 CAAATATGGAAGCTTGATATGAAAGTGAATAGCTCGATCAAAAGAATCATAGATGCGAGG 1078
Query 841 CTAAAATCGGAATCC-AAGAATTACGGAAATGATCTTCTGGGAATCATGTTAACAGCTGC 899
||| |||||||||| ||| |||||||||| |||||||||||||||||||||||||||||
Sbjct 1079 TTAACATCGGAATCCAAAG-ATTACGGAAACGATCTTCTGGGAATCATGTTAACAGCTGC 1137
Query 900 AAGCTCTAACGAGTCTGAGAAAAAGATGAGCATTGATGAGATCATAGAAGAATGCAAGAC 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1138 AAGCTCTAACGAGTCTGAGAAAAAGATGAGCATTGATGAGATCATAGAAGAATGCAAGAC 1197
Query 960 GTTCTTCTTCGCAGGACACGAAACTACTGCGAATCTATTGACATGGAGTACAATGTTGCT 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1198 GTTCTTCTTCGCAGGACACGAAACTACTGCGAATCTATTGACATGGAGTACAATGTTGCT 1257
Query 1020 TAGCTTGCACCAAGATTGGCAAGAGAAACTCAGAGAAGAAGTTTTCAATGAATGTGGTAA 1079
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1258 TAGCTTGCACCAAGATTGGCAAGAGAAACTCAGAGAAGAAGTTTTCAATGAATGCGGTAA 1317
Query 1080 AGACAAAATCCCAGATTCAGAGACATGCGCCAAACTCAAACTGATGAACATGGTGTTTAT 1139
|||||||||||||||| ||||||||||| ||||||| ||||||||||||| |||||||||
Sbjct 1318 AGACAAAATCCCAGATGCAGAGACATGCTCCAAACTAAAACTGATGAACACGGTGTTTAT 1377
Query 1140 GGAGTCACTTCGTCTATACGGACCAGTGTTAAATTTGCTCCGATTAGCATCAGAAGATAT 1199
|||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1378 GGAGTCCCTTCGTCTATACGGACCAGTGTTAAATCTGCTCCGATTAGCATCAGAAGATAT 1437
Query 1200 GAAATTAGGAAACCTAGAGATCCCTAAAGGCACGACTATAGTCCTCCCGATTGTGAAGAT 1259
|||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct 1438 GAAATTAGGAAACCTAGAGATCCCTAAAGGCACGACTATAATCCTCCCGATTGCGAAGAT 1497
Query 1260 GCACAGAGACAAAGCCATTTGGGGAAGTGACGCCGACAAATTCAACCCTATGCGGTTTGA 1319
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1498 GCACAGAGACAAAGCCGTTTGGGGAAGTGACGCCGACAAATTCAACCCTATGCGGTTTGC 1557
Query 1320 AAACGG-CAATTCTCGGGCCGCTAATCACCCAAACGCTCTTCTCGCGTTTTCAATCGGAC 1378
|||||| | |||||||||||||||||| || |||||||| |||||||||||||| ||||
Sbjct 1558 AAACGGTCT-TTCTCGGGCCGCTAATCATCCGAACGCTCTCCTCGCGTTTTCAATGGGAC 1616
Query 1379 CAAGAGCTTGCATTGGCCAAAACTTTGCCATAATGGAAGCCAAGACCGTTCTTGCCATGA 1438
|||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 1617 CAAGAGCTTGCATTGGCCAAAACTTTGCGATAATGGAAGCCAAGACCGTTCTCGCCATGA 1676
Query 1439 TTCTTCAACGGTTCCGGCTCAATCTCTCCGTCGATTATAAACACGCGCCAGCGGATCACC 1498
|||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||
Sbjct 1677 TTCTTCAACGGTTCCGGCTCAATCTCTCCGCCGATTATAAACATGCGCCGGCGGATCACC 1736
Query 1499 TCACTCTTCAGCCTCAGTACGATTTACCTGTGATGCTTCAACCCATCGACGGTTGA 1554
|||||||||| |||||||||||| |||||||||| ||| |||| ||||||||||||
Sbjct 1737 TCACTCTTCAACCTCAGTACGATCTACCTGTGATACTTGAACCTATCGACGGTTGA 1792
> AT2G46960.2 | Symbols: CYP709B1 | cytochrome P450, family 709,
subfamily B, polypeptide 1 | chr2:19292049-19294260 REVERSE
LENGTH=1854
Length=1854
Score = 953 bits (516), Expect = 0.0
Identities = 1192/1508 (79%), Gaps = 88/1508 (6%)
Strand=Plus/Plus
Query 81 GATCCTTGTTTGGCGGCCA-TTGATGCT-ATCAAGAAAATTCAAGAAGCAAGGAATCTCA 138
||| |||||||||| ||| ||| || | | | |||| | |||| || ||||||||||||
Sbjct 123 GATTCTTGTTTGGCATCCATTTG-TGTTGA-CCAGAAGACTCAAAAACCAAGGAATCTCA 180
Query 139 GGCCCAAAATACAGGATCTTGTACGGGAACCTCCGCGAGATTAGGAAGGTGAAGA-ACGC 197
|||||||| ||||| ||||| ||||| |||||| ||||||| | |||| |||||| | |
Sbjct 181 GGCCCAAATTACAGAATCTTTTACGGAAACCTCAGCGAGATAAAGAAGATGAAGAGA-GA 239
Query 198 AGCTAAGCTTAAGATTCTTGATCCAAACTCCAACGATATCGTCCCTCGCCTT-TTAGCTC 256
| || | ||| |||||||||||| | |||||| ||||| ||||||| || || |||
Sbjct 240 ATCTCATCTTTCGATTCTTGATCCTAGCTCCAATGATATTTTCCCTCGTATTCTT-CCTC 298
Query 257 ATCT-TCAGCAATGGATGTCTCAATACGGAGAGACTTTTCTTTACTGGCAA-GGTACAGA 314
|| | ||| |||||||||||||||||||||||||||||||||||||| || || |||||
Sbjct 299 AT-TATCAAAAATGGATGTCTCAATACGGAGAGACTTTTCTTTACTGG-AACGGAACAGA 356
Query 315 GCCAAGGTTATGCATCTCAGATCATGAGCTAGCGAAACA-GATCTTATCGAACAAGTTTG 373
||||||| ||||||||||||||| ||| || || ||| | || || ||||||||||| |
Sbjct 357 GCCAAGGATATGCATCTCAGATCCTGAACTTGC-AAAAACTATGTTGTCGAACAAGTTAG 415
Query 374 GtttttttGCT-AAATCAAAGACAAAACCTGA-GATCCTTAAACTTGCT-GG-T--AATG 427
|||| |||| | ||||||||| ||| |||||| | | ||||||||| | || | || |
Sbjct 416 GTTTCTTTG-TCAAATCAAAGGCAAGACCTGAGGCT-GTTAAACTTG-TCGGCTCCAAAG 472
Query 428 GACTTATC-TTCGCAAATGGT-CTTGATTGGGTTCGGCATAGACGAATCTTAAACCCTGC 485
||||| || || | || ||| | |||||||||||| |||||| ||||||| ||||||||
Sbjct 473 GACTTGTCTTTATCGAA-GGTGC-TGATTGGGTTCGCCATAGAAGAATCTTGAACCCTGC 530
Query 486 ATTCTCTATGGACAAACTCAAGCTCATGACCCA-ATTGATGGTGGATTGCAC-TTTGAGA 543
||||| || || | |||||| |||||| | | ||||||| ||||| || | ||
Sbjct 531 TTTCTCCATCGATAGGCTCAAGATCATGA-CGACCGTGATGGTTGATTGTACGCTCAAG- 588
Query 544 ATGTTCGACGAGTGGGGAAAACAGAGGAATGGTGG-CGAAACAGAGCAAGTGGTG-TT-- 599
||||| || |||||| ||||| |||| | | || ||||||||||| | | ||
Sbjct 589 ATGTTAGAGGAGTGGAGAAAAGAGAGCACT-AAGGAAGAAACAGAGCACCCGAAGATTAA 647
Query 600 ----G--ATTAGCAG-AGAGTT-TAAGAGATTGACCGCTGATATCATAGCCACGGCTGCG 651
| || | | | |||||| || ||| | || |||||||| ||||| || |||||
Sbjct 648 AAAGGAAATGAAC-GAAGAGTTCCAA-AGACTAACAGCTGATATAATAGCAACCTCTGCG 705
Query 652 TTTGGAAGCAGTTATG-CGGAAGGAATCGAAGTGTTTAAATCACAAATAGAGCTCCAAAA 710
|||||||||||||| | | ||||||||||||||||||| ||||||||| ||||| ||||
Sbjct 706 TTTGGAAGCAGTTACGTC-GAAGGAATCGAAGTGTTTAGATCACAAATGGAGCT-TAAAA 763
Query 711 -GTGTTGTGCTGCTTCTCT-TACTGACGTCTATTTCCCTGGAATC-CAGTACCTTCCTAC 767
||||| | | ||||||| || | |||| | ||||||||| | ||||||||||||||
Sbjct 764 GGTGTTATACAACTTCTCTCAAC-CAAGTCTCTATCCCTGGAA-CTCAGTACCTTCCTAC 821
Query 768 GCCTTCGAATC-TTCAAATATGGAAGCTTGATAGGAAAGTGAATAGCTCGACCAAAAGAA 826
||||||||| | ||| |||||||||| || |||||| || ||| ||| | || ||||
Sbjct 822 GCCTTCGAA-CATTCGGGTATGGAAGCTGGAGAGGAAAATGGATAACTCAATTAAGAGAA 880
Query 827 TCAT-AGATGCGAGGCTAAAATCGGAA-TCCAAGAATTACGGAAATGATCTTCTGGGAAT 884
| || || | |||| ||| | || || | | || |||| ||| | |||||||| |||||
Sbjct 881 TTATAAG-TTCGAGACTACAGTC-AAAGT-C-AG-ATTATGGAGACGATCTTCTCGGAAT 935
Query 885 CATGTT-AACAGC-TGCAAGCTCT-AACGAGTCTGAGAA--AAAGATGAGCATTGATGAG 939
| |||| || ||| | ||| | || || | | | ||| ||||||||||| || |||
Sbjct 936 CTTGTTGAA-AGCTTACAA-CACTGAA-G-GGAAG-GAACGGAAGATGAGCATCGAAGAG 990
Query 940 ATCATAGAAGAATGCAAGACGTTCTTCTTCGCAGGACACGAAACTACTGCGAATCTATTG 999
|||||| | ||||||| ||| |||||||||| ||| |||||||||||| ||||| |||||
Sbjct 991 ATCATACATGAATGCAGGACTTTCTTCTTCGGAGGTCACGAAACTACTTCGAATTTATTG 1050
Query 1000 ACATGGAGTACAATGTTGCTTAGCTTGCACCAAGATTGGCAAGAGAAACTCAGAGAAGAA 1059
|||||| || |||||||| |||||||||||||||||||| |||||||||||||||| |
Sbjct 1051 GCATGGACAACGATGTTGCTGAGCTTGCACCAAGATTGGCAGGAGAAACTCAGAGAAG-A 1109
Query 1060 G-TTTTCAATGAATGTGGTAAAGACAAAATCCCAGATTCAGAGACATGCGCCAAACTCAA 1118
| | ||||| ||||| |||||||| |||| |||||||||||| || | | ||||||||||
Sbjct 1110 GATATTCAAAGAATGCGGTAAAGAAAAAACCCCAGATTCAGAAACTTTCTCCAAACTCAA 1169
Query 1119 ACTGATGAACATGGTGTTTATGGAGTCACTTCGTCTATACGGACCAGTGTTAAATTT-GC 1177
||||||||||||||| | |||||||| ||||| || ||||||||||||| | ||| ||
Sbjct 1170 GCTGATGAACATGGTGATCATGGAGTCGCTTCGACTTTACGGACCAGTGTCAGCTTTGGC 1229
Query 1178 TCCGATTAGCATCAG-AAGATATGAAA-TTAGGAAACCTAGAGA-TCCCTAAAGGCACGA 1234
|||| |||||||| || |||| ||| ||||| ||||||||| |||| || ||||| |
Sbjct 1230 -CCGAGAAGCATCAGTAA-ATAT-AAAGTTAGGTGACCTAGAGATTCCC-AAGGGCACAA 1285
Query 1235 CTATAGTCCTCCCGATTGTGAAGATGCACAGAGACAAAG-CCATTTGGGGAAGTGACGCC 1293
| ||||| ||||| || |||||||||| || ||| ||| || |||||||| ||||||
Sbjct 1286 CCGTAGTCATCCCGCTTCTGAAGATGCATAGCGAC-AAGACCCTTTGGGGATCCGACGCC 1344
Query 1294 GACAAATTCAACCCTATGCGGTTTGAAAACGGCAATTCTCGGGCCGCTAATCACCCAAAC 1353
|||||||||||||| |||||||||| ||||||| ||| || ||||| ||||||||||||
Sbjct 1345 GACAAATTCAACCCAATGCGGTTTGCAAACGGCGTTTCCCGAGCCGCCAATCACCCAAAC 1404
Query 1354 GCTCTTCTCGCGTTTTCAATCGGACCAAGAGCTTGCATTGGCCAAAACTTTGCCATAATG 1413
||||| || || || || ||||||||||||||||||||||||||||||||| ||| ||
Sbjct 1405 GCTCTCCTAGCATTCTCCGTCGGACCAAGAGCTTGCATTGGCCAAAACTTTGTCATGATC 1464
Query 1414 GAAGCCAAGACCGTTCTTGCCATGATTCTTCAACGGTTCCGGCTCAATCTC-TCCGT--C 1470
||||||||||| || || ||||||||||||||||||| ||| | | | | || || |
Sbjct 1465 GAAGCCAAGACTGTGCTCACCATGATTCTTCAACGGTTTCGGTTTATTAGCCTCTGTGAC 1524
Query 1471 GATTATAAACACGCGCCAGCGGATCACCTCACTCTTCAGCCTCAGTACGATTTACCTGTG 1530
|| ||||| ||| | || | |||| || ||||| ||||||||||||||| ||||| ||
Sbjct 1525 GAGTATAAGCACACCCCTGTGGATAACGTCACTATTCAGCCTCAGTACGGCTTACCCGTA 1584
Query 1531 ATGCTTCA 1538
||||||||
Sbjct 1585 ATGCTTCA 1592
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76706432760
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5