BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg902948

Length=447
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G01420.1 | Symbols: ALPHA-DOX1, DOX1, DIOX1, PADOX-1 | Perox...  97.1    1e-19


> AT3G01420.1 | Symbols: ALPHA-DOX1, DOX1, DIOX1, PADOX-1 | Peroxidase 
superfamily protein | chr3:159466-162837 REVERSE LENGTH=2254
Length=2254

 Score = 97.1 bits (52),  Expect = 1e-19
 Identities = 58/61 (95%), Gaps = 0/61 (0%)
 Strand=Plus/Minus

Query  387  TCTTGATTTCGAAGAAACCGGTAGGGACTTCCTTTGTCTTGAAGAAGCTAAAGGAGCTTA  446
            |||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||
Sbjct  736  TCTTGATTTCGAAGAAACCGGTAGGGACTTCCTTGGTCTTTAAGAACCTAAAGGAGCTTA  677

Query  447  A  447
            |
Sbjct  676  A  676



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 21263257827


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5