BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg903001
Length=1392
Score E
Sequences producing significant alignments: (Bits) Value
AT3G02100.1 | Symbols: | UDP-Glycosyltransferase superfamily p... 2119 0.0
AT3G02090.2 | Symbols: MPPBETA | Insulinase (Peptidase family M... 122 6e-27
> AT3G02100.1 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr3:368840-370484 REVERSE LENGTH=1395
Length=1395
Score = 2119 bits (1147), Expect = 0.0
Identities = 1315/1397 (94%), Gaps = 7/1397 (1%)
Strand=Plus/Plus
Query 1 ATGGATAATAACTTAAATAAAAGAATGGGAAGGCCACATGTTGTGGTCATACCTTACCCA 60
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGATAATAACTCAAATAAAAGAATGGGAAGGCCACATGTTGTGGTCATACCTTACCCT 60
Query 61 GCACAAGGTCATGTTCTTCCTCTAATGAGTTTCTCACGTTACCTTGCGAAACAAGGAATC 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 61 GCACAAGGTCATGTTCTTCCTCTAATAAGTTTCTCACGTTACCTTGCGAAACAAGGAATC 120
Query 121 CAAATTACATTCATAAACACCGAGTTTAACCATAATCGCATCATCAATTCCTTACCCAAT 180
||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct 121 CAAATTACATTCATAAACACCGAGTTTAACCATAACCGCATCATCAGTTCCTTACCCAAT 180
Query 181 TCATCTCATGAAGATTATGTTGGGGATGGGATCAATCTTGTTTCAATCCCCGACGGTTTA 240
||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct 181 TCACCTCATGAAGATTATGTTGGGGATCAGATCAATCTTGTTTCAATCCCTGACGGTTTA 240
Query 241 GAAGATTCACCAGAAGAGAGGAACATTCCAGGGAAGTTGTCGGAGTCTGTTTTGCGTTTT 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 GAAGATTCACCAGAAGAGAGGAACATTCCAGGGAAGTTGTCGGAGTCTGTTTTGCGTTTT 300
Query 301 ATGCCTAAAAAAGTAGAGGAATTGATC--GCGGA-AACTAGCGGTGGC-AGCTGCGGTAC 356
||||||||||||||||||||||||||| | ||| | | || | | ||| | |||||
Sbjct 301 ATGCCTAAAAAAGTAGAGGAATTGATCGAGAGGATGA-TGGCAGAAACTAGCGGTGGTAC 359
Query 357 AATCATTAGCTGCGTTGTAGCGGATCAGAGCTTGGGATGGGCAATCGAAGTTGCAGCTAA 416
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 360 GATCATTAGCTGCGTTGTAGCGGATCAGAGCTTGGGATGGGCAATTGAAGTTGCAGCTAA 419
Query 417 GTTTGGGATCAGACGCGCCGCGTTTTGTCCTGCCGCGGCTGCGTCTATGGTTCTTGGATT 476
|||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||
Sbjct 420 GTTTGGGATCAGACGCACCGCGTTTTGTCCTGCTGCAGCTGCGTCTATGGTTCTTGGATT 479
Query 477 TAGTATTCAAAAACTTATTGATGATGGTCTCATAGATTTTGATGGGACTGTGAGGGTAAA 536
|||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||
Sbjct 480 TAGTATTCAAAAACTTATCGATGATGGTCTCATAGATTCTGATGGGACTGTGAGAGTAAA 539
Query 537 TAAGACAATTCAGTTATCTCCCGGGATGCCAAAGATGGAAACAGACAAGTTTGTGTGGGT 596
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 TAAGACAATTCAACTATCTCCCGGGATGCCAAAGATGGAAACAGACAAGTTTGTGTGGGT 599
Query 597 TTGTCTGAAGAACAAAGAATCTCAGAAGAACATATTCCAACTTATGCTTCAAAACAATAA 656
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 600 TTGTCTGAAGAACAAAGAATCTCAGAAAAACATATTCCAACTTATGCTTCAAAACAATAA 659
Query 657 CTCAATCGAGTCAACGGATTGGTTGTTGTGTAACTCTGTCTATGAACTCGAAACGGCAGC 716
||| |||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||
Sbjct 660 CTCGATCGAGTCAACGGATTGGTTGTTGTGTAACTCTGTCCATGAACTTGAAACTGCAGC 719
Query 717 ATTTCGATTAGGCCTGAAAATATTACCGATTGGGCCCATTGGTTGGGGTCATAGTCT-GC 775
|||| |||| |||| ||| ||| |||| ||||||||||||||||||| ||||||||| |
Sbjct 720 ATTTGGATTGGGCCCGAATATAGTACCAATTGGGCCCATTGGTTGGGCTCATAGTCTTGA 779
Query 776 AGGAGGGGTCCATGTCACTAGGAAGCTTTTTGCCTCAGGACCGGGATTGTTTGGATTGGT 835
|| |||| |||| |||||||||||||||||| ||||| |||||||||||| | |||||||
Sbjct 780 AG-AGGGATCCACGTCACTAGGAAGCTTTTTACCTCATGACCGGGATTGTCTAGATTGGT 838
Query 836 TGGACCGGCAGATTCCCGGTTCGGTGATATATGTTGCCTTTGGGAGTTTTGGGGTTATGG 895
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 839 TGGACCGGCAGATTCCCGGTTCGGTTATATATGTTGCCTTTGGGAGTTTTGGGGTCATGG 898
Query 896 GCGACGTTCAATTAGAAGAGCTAGCAATTGGTCTAGAGCTTACCAAGAGGCCAGTTTTGT 955
|| || ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 899 GCAACCCTCAGTTAGAAGAGCTAGCAATTGGTCTAGAGCTTACCAAGAGGCCAGTTTTGT 958
Query 956 GGGTCACTGGTGATCAACAAACAATCAAACTCGTGTCGGATCGAGTCAAAGTGGTGAGAT 1015
|||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||
Sbjct 959 GGGTCACTGGTGATCAACAACCAATCAAACTTGGGTCGGATCGAGTCAAAGTGGTGAGAT 1018
Query 1016 GGGCTCCACAACGGGAGGTTCTTTTTTGTGGAGCCATTGGATGTTTCGTGAGCCATTGTG 1075
||||||||||||||||||| |||| || |||||||||||| ||||| |||||||||||||
Sbjct 1019 GGGCTCCACAACGGGAGGTCCTTTCTTCTGGAGCCATTGGGTGTTTTGTGAGCCATTGTG 1078
Query 1076 GATGGAATTCAACTCTGGAAGGAGCCCAAAATGGTATACCATTTCTATGCATCCCTTATC 1135
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1079 GATGGAATTCAACTCTGGAAGGAGCCCAAAATGGCATACCATTTCTATGCATCCCTTATT 1138
Query 1136 TTGCAGACCAATTTATCAACAAAGCATATATATGCGATGTGTGGAAGATTGGATTAGGAG 1195
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1139 TTGCAGACCAATTTATCAACAAAGCATATATATGCGATGTGTGGAAGATTGGATTAGGAC 1198
Query 1196 TTGAGAGAGACGAACGAGGAGTGGTTCCGAGGTTAGAGGTGAAGAAGAAGATCGATGAGA 1255
|||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1199 TTGAAAGAGACGCACGAGGAGTGGTTCCGAGGTTAGAGGTTAAGAAGAAGATCGATGAGA 1258
Query 1256 TCATGAGTGACTATGGAGAGTATAAAGAACGAGCTATGAAGATTAAAGAGGTTGTGATGA 1315
||||||| ||| |||||||||| ||||||||||||||||| |||||||| |||||||||
Sbjct 1259 TCATGAGAGACGGTGGAGAGTATGAAGAACGAGCTATGAAGGTTAAAGAGATTGTGATGA 1318
Query 1316 AAAGTGTTGCAAAAGATGGAATTTCTTGTGAGAATCTTAATAAATTTGTCAACTGGATCA 1375
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1319 AAAGTGTTGCAAAAGATGGAATATCTTGTGAGAATCTTAATAAATTTGTCAACTGGATCA 1378
Query 1376 AATCACAAGTGTATTGA 1392
||||||||||| |||||
Sbjct 1379 AATCACAAGTGAATTGA 1395
> AT3G02090.2 | Symbols: MPPBETA | Insulinase (Peptidase family
M16) protein | chr3:365549-368911 FORWARD LENGTH=2060
Length=2060
Score = 122 bits (66), Expect = 6e-27
Identities = 70/72 (97%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 1321 GTTGCAAAAGATGGAATTTCTTGTGAGAATCTTAATAAATTTGTCAACTGGATCAAATCA 1380
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2060 GTTGCAAAAGATGGAATATCTTGTGAGAATCTTAATAAATTTGTCAACTGGATCAAATCA 2001
Query 1381 CAAGTGTATTGA 1392
|||||| |||||
Sbjct 2000 CAAGTGAATTGA 1989
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 68573944470
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5