BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg903036
Length=1281
Score E
Sequences producing significant alignments: (Bits) Value
AT3G02410.1 | Symbols: ICME-LIKE2 | alpha/beta-Hydrolases super... 2050 0.0
AT5G15860.1 | Symbols: ATPCME, PCME | prenylcysteine methyleste... 966 0.0
> AT3G02410.1 | Symbols: ICME-LIKE2 | alpha/beta-Hydrolases superfamily
protein | chr3:492118-494948 REVERSE LENGTH=1340
Length=1340
Score = 2050 bits (1110), Expect = 0.0
Identities = 1226/1281 (96%), Gaps = 12/1281 (1%)
Strand=Plus/Plus
Query 1 ATGCAGTTGTCTCCGGAACGATGCCGTCCGATGTCTTTAACAGCGTCGGAAATGAAAGAG 60
||||||||||||||||||||||||||||||||||| | || | | | | ||||
Sbjct 72 ATGCAGTTGTCTCCGGAACGATGCCGTCCGATGTC-TGAA-A-------ACA-G--AGAG 119
Query 61 GCTTGCCCAGCGAATTCCGACGAAATGGAGCTGCTTCACGGCTCCAACAGATTATCTTCA 120
||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 120 GCTTGGTCAGCGAATTCCGAGGAAATGGAGCTGCTTCACGGCTCCAACAGATTATCTTCA 179
Query 121 CCGGAACATGTTCGTAGAAGAGTCTCTGGGAATTCTTCTGCGGAAGGTTCGCCTCGAATT 180
|||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||
Sbjct 180 CCGGAACATGTTCGTAGAAGAGTCTCCGGGAATTCTTCTGAGGACGGTTCGCCTCGAATT 239
Query 181 TGTCGGCAGCAGTCGTTCGGTCGCGACATAGGCCATGCAGCTGCCGAGACGTATTTAATT 240
|| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 240 TGCCGGCAGCAGTCGTTCGGTCGCGACATAGGCCATGCAGCTGCCGAGACGTATCTCATT 299
Query 241 ACTCGGCTTAGCTTCAACCTTCTTGGATATCTCGGGGTAGGTTACCGGTGGATCACAAGA 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 ACTCGACTTAGCTTCAACCTTCTTGGATATCTCGGGGTAGGTTACCGGTGGATCACAAGA 359
Query 301 TTACTAGCTCTTGCTTGTTATGCAATGCTCCTTATGCCTGGTTTCCTTCAAGTTGCATAT 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 TTACTTGCTCTTGCTTGTTATGCAATGCTCCTTATGCCTGGTTTCCTTCAAGTTGCATAT 419
Query 361 CTTTATTTTTTCTCATCTCAAGTCAGGAGGAGTATAGTTTATGGAGGTCATCCAAGGAAT 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 CTTTATTTTTTCTCATCTCAAGTCAGGAGGAGTATAGTTTATGGAGGTCATCCAAGGAAT 479
Query 421 AGGCTGGATTTGTACTTACCGCCAACTAATGATGGCCTGAAGCCGGTTGTTGTTTTCGTG 480
||||||||||||||| |||||||||| | ||||||||||||||||||||| ||||||||
Sbjct 480 AGGCTGGATTTGTACATACCGCCAACGAGTGATGGCCTGAAGCCGGTTGTAGTTTTCGTT 539
Query 481 ACTGGTGGAGCTTGGATTATCGGTTACAAAGCTTGGGGTTCTCTCTTGGGGCTGCAGCTA 540
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 540 ACTGGTGGAGCTTGGATTATCGGTTACAAAGCTTGGGGTTCTCTCTTGGGACTACAGCTA 599
Query 541 GCAGAAAGGGACATAATTGTGGCATGTCTAGATTACAGAAACTTTCCTCAGGGCACAATT 600
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 600 GCAGAAAGGGACATAATTGTGGCATGTCTAGATTACAGAAACTTTCCTCAGGGGACAATT 659
Query 601 AGTGATATGGTAAGTGATGCCGCGCAAGGAATCTCATTTGTCTGCAATAACATCTCTGCA 660
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 660 AGTGATATGGTAAGTGATGCAGCTCAAGGAATCTCATTTGTCTGCAATAACATCTCTGCA 719
Query 661 TTTGGAGGTGATCCTAACAGAATCTATTTGATGGGGCAATCAGCTGGTGCACATATCTCT 720
||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct 720 TTTGGAGGTGATCCTAACAGAATCTATCTGATGGGGCAATCGGCTGGTGCACATATCTCT 779
Query 721 TCTTGTGCTCTCTTTGAGCAAGCTATTAAAGAATCAAGACGGGAGAGCATCTCATGGAGT 780
||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct 780 TCTTGTGCTCTCTTTGAACAAGCTATTAAAGAATCAAGAGGGGAGAGCATCTCATGGAGT 839
Query 781 GTATCTCAGATAAAAGCTTACTTTGGTTTATCTGGAGGGTACAATCTCTTCAATCTGGTT 840
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 840 GTATCTCAGATTAAAGCTTACTTTGGTTTATCTGGAGGGTACAATCTCTTTAATCTGGTT 899
Query 841 GAACACTTCCACAACCGGGGCTTGTATCGTTCAATTTTCCTAAGCATAATGGAAGGAGAA 900
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 GAACACTTCCACAACCGAGGCTTGTATCGTTCAATTTTCCTAAGCATAATGGAAGGAGAA 959
Query 901 GAGTCCTTTGAACAATTCTCTCCTGAAGTGAGATTGAAAGACCTGAGTGTAAGAAAAGCT 960
||||||||| |||||||||| |||||||| |||||||||||||||| |||||||||||||
Sbjct 960 GAGTCCTTTAAACAATTCTCCCCTGAAGTAAGATTGAAAGACCTGAATGTAAGAAAAGCT 1019
Query 961 GCAGCCCTCTTACCTTATATTACACTCTTTCATGGATCCGCAGATTATTCAATTCCACCT 1020
||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1020 GCAGCCCTCTTACCTCATATTATACTCTTTCATGGATCCGCAGATTATTCAATTCCACCT 1079
Query 1021 GAAGCAAGCAAAACTTTTACAGATGCTCTTCGAGCTGCTGAAGTGAAAGCTGAGCTAGTT 1080
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1080 GAAGCAAGCAAAACTTTTACAGATGCTCTTCAAGCTGCTGAAGTGAAAGCTGAGCTAGTT 1139
Query 1081 ATGTACAAGGGTAAAACTCATACCGATCTATTTCTTCAGGATCCTCTGAGAGGCGGTAAA 1140
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1140 ATGTACAAGGGTAAAACTCATACCGACCTATTTCTTCAGGATCCTCTGAGAGGCGGTAAA 1199
Query 1141 GATGAGCTATTTGATCATATAGTCTCTATGATACACGCCGATGACAGTTACGCATTGAGA 1200
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1200 GATGAGCTATTTGATCATATAGTCTCTATGATACACGCCGATGACAGTGACGCATTGAGA 1259
Query 1201 AATGATGCTGTTGCGCCACCGAGAAAACGGCTTGTTCCAGAGTTCTTGCTGAAACTGGCC 1260
|| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1260 AACGATGCTGTTGCGCCACCGAGGAAACGGCTTGTTCCAGAGTTCTTGCTGAAACTGGCT 1319
Query 1261 GGCAAGGTCAGCCCTTTTTGA 1281
|||| ||||||||||||||||
Sbjct 1320 GGCAGGGTCAGCCCTTTTTGA 1340
> AT5G15860.1 | Symbols: ATPCME, PCME | prenylcysteine methylesterase
| chr5:5178505-5181383 REVERSE LENGTH=1575
Length=1575
Score = 966 bits (523), Expect = 0.0
Identities = 934/1129 (83%), Gaps = 42/1129 (4%)
Strand=Plus/Plus
Query 174 TCGAATTTGT-CGGCAGCAGTCGTTCGGTCGCGACATAGGCCATGCAGCTGCCGAGACGT 232
||| |||| | |||||||| |||||||||||||| || ||||| || || || || ||||
Sbjct 297 TCGGATTT-TCCGGCAGCAATCGTTCGGTCGCGATATCGGCCACGCGGCAGCTGAAACGT 355
Query 233 ATTTAATTACTCGG-CTTAGCTTCAACCTTCTTGGATATCTCGGGGTAGGTTACCGGTGG 291
|| |||||||| || ||||||||||| |||||| |||| ||||||||||| || || |||
Sbjct 356 ATCTAATTACT-GGACTTAGCTTCAAGCTTCTTCGATACCTCGGGGTAGGCTATCGATGG 414
Query 292 ATCACAAGATTACTAGCTCTTGCTTGTTATGCAATGCTCCTTATGCCTGG-TTTCCTTCA 350
|| |||| |||||| || ||| | |||||||| ||||| ||||||||||| ||| |||||
Sbjct 415 ATGACAAAATTACTTGCCCTTACATGTTATGCTATGCTTCTTATGCCTGGCTTT-CTTCA 473
Query 351 AGTTGCATATCTTTATTTTTTCTCATCTCAAGTCAGGAGGAGTATAGTTTATGGAGGTCA 410
|||||||||| ||||||||||||| |||||| ||||||||||||| ||||||| |||
Sbjct 474 AGTTGCATATAGTTATTTTTTCTCAAAGCAAGTCCGGAGGAGTATAGTGTATGGAGATCA 533
Query 411 TCCAAGGAATAGGCTGGATTTGTACTTACC--GCCAACTAATGATGGCCTGAAGCCGGTT 468
|||||||| ||||||||| ||||||| || | |||| || |||||| |||||||||||
Sbjct 534 ACCAAGGAACAGGCTGGATCTGTACTTGCCAAG-CAAC-AACGATGGCTTGAAGCCGGTT 591
Query 469 GTTGTTTTCGTGACTGGTGGAGCTTGGATTATCGGTTACAAAGCTTGGGGTTCTCTCTTG 528
|| ||||| ||||| ||||||||||||||||| || |||||||||||||| || ||||||
Sbjct 592 GTGGTTTTTGTGACGGGTGGAGCTTGGATTATTGGGTACAAAGCTTGGGGCTCGCTCTTG 651
Query 529 GGGCTGCAGCTAGCAGAAAGGGACATAATTGTGGCATGTCTAGATTACAGAAACTTTCCT 588
|| |||||||||||||||| || || ||||| ||||| || || ||||| |||||||||
Sbjct 652 GGAATGCAGCTAGCAGAAAGAGATATCATTGTAGCATGCCTTGACTACAGGAACTTTCCT 711
Query 589 CAGGGCACAATTAGTGATATGGTAAGTGATGCCGCGCAAGGAATCTCATTTGTCTGCAAT 648
||||| ||||||||||||||||| | |||||| | ||||||||||||||||||||||||
Sbjct 712 CAGGGAACAATTAGTGATATGGTGACTGATGCTTCTCAAGGAATCTCATTTGTCTGCAAT 771
Query 649 AACATCTCTGCATTTGGAGGTGATCCTAACAGAATCTATTTGATGGGGCAATCAGCTGGT 708
||||||||||||||||||||||| || ||||| ||||| ||||||||||||||||||||
Sbjct 772 AACATCTCTGCATTTGGAGGTGACCCCAACAGGATCTACCTGATGGGGCAATCAGCTGGT 831
Query 709 GCACATATCTCTTCTTGTGCTCTCTTTGAGCAAGCTATTAAAGAATCAAGACGG-GAGAG 767
|| ||||| | |||||||||| || || ||||||| |||||||| || | || |||||
Sbjct 832 GCCCATATAGCCGCTTGTGCTCTATTGGAACAAGCTACTAAAGAATTAAAA-GGAGAGAG 890
Query 768 CATCTCATGGAGTGTATCTCAGATAAAAGCTTACTTTGGTTTATCTGGAGGGTACAATCT 827
|||||| |||| || || |||||||||||||| ||||| ||||||||||||||||||||
Sbjct 891 CATCTCCTGGACAGTGTCCCAGATAAAAGCTTATTTTGGATTATCTGGAGGGTACAATCT 950
Query 828 CTTCAA-TCTGGTTGAACACTTCCACAACCGGGG-CTTGTATCGTTCAATTTTCCTAAGC 885
| ||| | ||||||| |||||||| || ||||| || |||||| || ||||||||||||
Sbjct 951 ATACAAGT-TGGTTGATCACTTCCATAATCGGGGTCT-GTATCGCTCGATTTTCCTAAGC 1008
Query 886 ATAATGGAAGGAGAAGAGTCCTTTGA-ACAATTCTCTCCTGAAGTGAGATTGAAAGACCT 944
|||||||||||||||||||||||||| | |||||||||| ||||| ||| |||||||||
Sbjct 1009 ATAATGGAAGGAGAAGAGTCCTTTGAGA-AATTCTCTCCGGAAGTAAGACTGAAAGACCC 1067
Query 945 GAGT-GTAAGAAAAGCTGCAGCCCTCTTACCTTATATTACACTCTTTC-ATGGATCCGCA 1002
||| || |||||||||| | || |||||| ||||| ||| |||| | |||||| ||
Sbjct 1068 -AGTTGTTGGAAAAGCTGCTTCTCTTTTACCTCCTATTATACT-TTTCCACGGATCCTCA 1125
Query 1003 GATTATTCAATTCCAC-CTGAAGCAAGCAAAACTTTTACAGATGCTCTTCGAGCTGCTGA 1061
|||||||| || ||| | || | |||||||||||||||||| ||||| | ||||| ||
Sbjct 1126 GATTATTCCATACCATGC-GATGAAAGCAAAACTTTTACAGACGCTCTGCAAGCTGTTGG 1184
Query 1062 AGTGAAAGCTGAGCTAGTTATGTACAAG-GGTAAA-ACTCATACCGATCT-ATTTCTTCA 1118
|| ||||| ||||| ||| | |||| | || ||| || ||||| || || |||||||||
Sbjct 1185 AGCAAAAGCCGAGCTTGTTTTATACA-GCGG-AAAGACACATACTGA-CTTATTTCTTCA 1241
Query 1119 GGATCCTCTGA-GAGGCGGTAAAGATGAGCTATTTGATCATATAGTCTCTATGATACACG 1177
|||||| || | |||| |||||||| || || |||||| | ||||||||| ||||||| |
Sbjct 1242 GGATCC-CTTACGAGGAGGTAAAGACGAACTCTTTGATGACATAGTCTCTGTGATACATG 1300
Query 1178 CCGATGACAGTTACGCATTGAG-AAATGA-TGCTGTTG-CGCCACCGAGAAAACGGCTTG 1234
| || |||| | | | ||| ||| || | | |||| | || || ||||| || ||||
Sbjct 1301 CGGAGGACAATGATGGGCTGACCAAA-GACT-C-GTTGGCTCCTCCCAGAAAGCGTCTTG 1357
Query 1235 TTCCAGAGTTCTTGCTGAAACTGGC-CG-GCAAGGTCAGCCCTTTTTGA 1281
| |||||||| || ||||||||||| || | | | | |||||||| |||
Sbjct 1358 TACCAGAGTTGTTACTGAAACTGGCTCGTG-A-GATTAGCCCTTTCTGA 1404
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 63001683975
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5