BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg903150

Length=384
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G03350.2 | Symbols:  | NAD(P)-binding Rossmann-fold superfam...   440    4e-123


> AT3G03350.2 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily 
protein | chr3:791183-794812 FORWARD LENGTH=1429
Length=1429

 Score =  440 bits (238),  Expect = 4e-123
 Identities = 276/294 (94%), Gaps = 3/294 (1%)
 Strand=Plus/Plus

Query  88   TTTTTCTCCATGTTCCTCGTGTTACACTATCTCACTAATCAAGCCAATTCCGATTCTT-C  146
            |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct  82   TTTTTCTCAATGTTCCTCGTGTTACACTATCTCACTAATCAAACCAATTCCGATTCTTAC  141

Query  147  C-C-TAGAACATACCGGAATTACAACTCCGTTGCCGCCACCGCCACCAAGAAAGACTTAC  204
            | |  || |||||||||||||||||||||||||| |||||| |||||||||||||| |||
Sbjct  142  CTCGGAGGACATACCGGAATTACAACTCCGTTGCGGCCACCACCACCAAGAAAGACATAC  201

Query  205  TGCAGTAGGTCATCTTCATCTCCACCTCCGCCTAAATACATGTATGTGACCGGTGTGCCT  264
            ||||| | |||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct  202  TGCAGCAAGTCATCTTCATCTCCACCTCCGCCGAAATACATGTATGTAACCGGTGTGCCT  261

Query  265  GGGGAACTCTACCGGACCGAGCCAGACGACCAATGGGGATATTATTCTAGTGTAAACCGG  324
            |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| 
Sbjct  262  GGGGAACTCTACCGGACCGAGCCAGATGACCAATGGGGATATAATTCTAGTGTAAACCGA  321

Query  325  AATCTGGTTAAGTGTCTCATGGTTATTGTAATTGTGGGGTTTGGAGTTATAAAT  378
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct  322  AATCTGGTTAAGTGTCTCTTGGTTATTGTAATTGTGGGGTTTGGAGTTATAAAT  375



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 18096389640


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5