BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg903252 Length=3885 Score E Sequences producing significant alignments: (Bits) Value AT3G04340.1 | Symbols: emb2458 | FtsH extracellular protease fa... 6174 0.0 > AT3G04340.1 | Symbols: emb2458 | FtsH extracellular protease family | chr3:1146800-1153341 REVERSE LENGTH=4106 Length=4106 Score = 6174 bits (3343), Expect = 0.0 Identities = 3670/3827 (96%), Gaps = 25/3827 (1%) Strand=Plus/Plus Query 1 ATGGATTTCATTTCCGCTTCTTCCATATCTTCACCC-TTTCTCACACAGTTGTCTCCGCT 59 |||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||| | Sbjct 1 ATGGATTTCATTTCCGCTTCTTCCTTATCTTCACCCTTTTC-CACACAGTTGTCTCCGAT 59 Query 60 TTCTTTGAGCTCAGGTATAGTATCGTTAAAGCCTAGATATCGGGTCAAAAAACGAAACTT 119 || |||||||||||||||||||||||||||||||||| |||| |||||||| |||||||| Sbjct 60 TTATTTGAGCTCAGGTATAGTATCGTTAAAGCCTAGACATCGAGTCAAAAATCGAAACTT 119 Query 120 TGGGTCTAGAGAATCC---AATAAATCTAGGAAATTTGTGCCCATTAGAGGCTGCTTTGG 176 |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| | Sbjct 120 TGGGTCTAGAGAATCCAATAATAAATCTAGGAAAATTGTGCCCATTAGAGGCTGCTTT-G 178 Query 177 GTTTTCCGGCGTAAATGGGAGTTTTTTGAGGTCGAAACAGTCTGATTACGGGAATGAAGC 236 ||||| | | ||||||||||||||||||||||||||||||||||| | |||||| Sbjct 179 GTTTTTC--C------GGGAGTTTTTTGAGGTCGAAACAGTCTGATTACGGTAGTGAAGC 230 Query 237 TGTTTCGGAATCATTGAGAGTAAGTGGAGAGGGAAATGAGCTTGTGCCATCGTCTGTGTA 296 ||||||||||||||||||| || |||||||||||||||||||||||| ||| || | ||| Sbjct 231 TGTTTCGGAATCATTGAGATTATGTGGAGAGGGAAATGAGCTTGTGCTATCTTCCGAGTA 290 Query 297 T-A-A-CGCAAAGACGAGAGAGAGCGTAATACAGTTTGTGT-CAAAGCCTTTAGTTTACG 352 | | | ||||||||||||||||||||||||||||||||| | | |||||| ||||||||| Sbjct 291 TAATAGCGCAAAGACGAGAGAGAGCGTAATACAGTTTGT-TACCAAGCCTCTAGTTTACG 349 Query 353 TCTTATTTTGTATTGCAATTGGGTTTTCGCCAATTCACTCTTTTCAAGCTCCAGCTTTAG 412 ||| ||||||||||||||||| |||| || |||| ||||||||||||||||||||||| Sbjct 350 CCTTGTTTTGTATTGCAATTGGACTTTCTCCGATTCGCTCTTTTCAAGCTCCAGCTTTAG 409 Query 413 CTGTGCCTTTCGTCAGTGATGTGATTTGGAAGAAAAAGAAAGAGACAGTGAAAGATAAAG 472 |||||||||||||||||||||| |||||||||||||||||||||| ||||| ||| |||| Sbjct 410 CTGTGCCTTTCGTCAGTGATGTTATTTGGAAGAAAAAGAAAGAGAGAGTGAGAGAGAAAG 469 Query 473 AGGTGGTTTTGAAAGCAGTTGATCATGAGTTCTCGGATTATACACGGAGATTGTTGGAGA 532 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 470 AGGTGGTTTTGAAAGCAGTTGATCATGAGTTCTCGGATTATACTCGGAGATTGTTGGAGA 529 Query 533 CAGTCTCGGTTTTACTGAAGACTATTGACA-AGGTTAGAAAGGAAAATGGAGATGTTGCT 591 |||||||||||||||||||||||||||| | | |||||||||||||||||||| |||||| Sbjct 530 CAGTCTCGGTTTTACTGAAGACTATTGAGATA-GTTAGAAAGGAAAATGGAGAGGTTGCT 588 Query 592 GAAGTGGGAACGGCTTTGGATGCAGTAAAGGTGGAGAAGGAGAAACTGCAGAAAGAGATA 651 ||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct 589 GAAGTGGGAGCGGCTTTGGATGCAGTTAAGGTGGAGAAGGAGAAACTGCAGAAGGAGATA 648 Query 652 ATGAGTGGATTATATCGTGATATGAGGCGGTTGAGGAAGGAGAGAGATGTGTTAATGAAA 711 |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 649 ATGAGTGGGTTATATCGTGATATGAGGCGGTTGAGGAAGGAGAGAGATTTGTTAATGAAA 708 Query 712 CGAGCTGATGGGATTGTAGATGAGGCCCTAAGATTGAAGAAAGAGAGTGAAAAACTGTTG 771 ||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct 709 CGAGCTGATAAAATTGTAGATGAGGCCCTAAGTTTGAAGAAACAGAGTGAAAAACTGTTG 768 Query 772 AGAAAAGGTGCTAGGGAGAAAGTGGAGAAACTGGAAGAGAGTGTGGATATAATGGAGAGT 831 ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct 769 AGAAAAGGTGCTAGGGAGAAAATGGAGAAACTGGAAGAGAGTGTGGATATTATGGAGAGC 828 Query 832 GATTACAACAAGATGTGGGAAAGAATAGATGAGATTGATGATATCATTTTAAATAAAGAG 891 || ||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 829 GAGTACAATAAGATATGGGAAAGAATAGATGAGATTGATGATATCATTTTAAAGAAAGAG 888 Query 892 ACAACAACATTGAGTTTTGGGGTTAGGGAGCTTATTTTCATCGAAAGAGAGTGTGTGGAG 951 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 889 ACAACAACATTGAGTTTTGGGGTTAGGGAGCTTATTTTCATTGAAAGAGAGTGTGTAGAG 948 Query 952 TTGGTTAAGAGCTTCAACAGAGAAACGAATCAAAAAAGTTCTGAAAGTGCTCCTGAAAGC 1011 |||||||||||||||||| ||||| |||||||||||||| |||||||| |||||||||| Sbjct 949 TTGGTTAAGAGCTTCAACCGAGAATTGAATCAAAAAAGTTTTGAAAGTGTTCCTGAAAGC 1008 Query 1012 TCCATTACAAAACTCTCGAGGTCTGAGATTAAGCAGGAATTAGTGAACGCTCAAAGAAAG 1071 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1009 TCCATTACAAAACTCTCGAGGTCTGAGATTAAGCAGGAATTAGTGAACGCTCAAAGAAAG 1068 Query 1072 CACTTGGAACAAATGATACTGCCTAATGTTTTGGAACTAGAGGAGGTTGATCCCTTTTTC 1131 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1069 CACTTGGAACAAATGATACTGCCCAATGTTTTGGAACTAGAGGAGGTTGATCCCTTTTTC 1128 Query 1132 AATCGTGACTCAGTGGATTTTTCTCTACGCATCAAAAAACGCCTTGAGGAATCAAAAAAG 1191 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1129 GATCGTGACTCAGTGGATTTTTCTCTACGCATCAAAAAACGCCTTGAGGAATCAAAAAAG 1188 Query 1192 CTGCAGAGAGATCTTCAGAATCGTATCAGAAAACGTATGAAAAAGTTTGGTGAAGAAAAG 1251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1189 CTGCAGAGAGATCTTCAGAATCGTATCAGAAAACGTATGAAAAAGTTTGGTGAAGAAAAG 1248 Query 1252 CTTTTTGTTCAAAAGACTCCAGAAGGTGAAGCTGTCAAAGGATTTCCTGAAGCCGAGGTG 1311 |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct 1249 CTTTTTGTTCAAAAGACTCCAGAAGGTGAAGCTGTCAAGGGATTTCCTGAAGCAGAGGTG 1308 Query 1312 AAATGGATGTTTGGAGACAAGGAGGTGGTCGTTCCGAAAGCCATCCAGCTCCATCTACGC 1371 ||||||||||||||||| || |||||||| ||||||||||| |||||||||||||||||| Sbjct 1309 AAATGGATGTTTGGAGAGAAAGAGGTGGTTGTTCCGAAAGCTATCCAGCTCCATCTACGC 1368 Query 1372 CATGGTTGGAAAAAGTGGCAGGAAGAAGCAAAAGCCGATTTGAAACAGAAACTTTTGGAA 1431 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1369 CATGGTTGGAAAAAGTGGCAGGAAGAAGCAAAAGCCGATTTAAAACAGAAACTTTTGGAA 1428 Query 1432 GATGTTGATTTTGGTAAACAATATATTGCGCAGAGACAGGAACAAGTTCTCCTGGATCGA 1491 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1429 GATGTTGATTTTGGCAAACAATATATTGCGCAGAGACAGGAACAAGTTCTCCTGGATCGA 1488 Query 1492 GATAGAGTTGTTTCAAAGACATGGTATAACGAAGACAAAAATAGGTGGGAGATGGACCCT 1551 |||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||| Sbjct 1489 GATAGAGTTGTTTCGAAGACTTGGTATAACGAAGACAAAAGTAGGTGGGAGATGGACCCT 1548 Query 1552 ATGGCTGTTCCATATGCAGTTTCCAGGAAGCTGATTGACAGTGCCAGGATTAGGCATGAT 1611 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1549 ATGGCTGTTCCCTACGCAGTTTCCAGGAAGCTGATTGACAGTGCCAGGATTAGGCATGAT 1608 Query 1612 TATGCTGTAATGTATGTTGCATTAAAAGGAGATGACAAGGAGTATCACATTGACATCAAG 1671 ||||||||||||||||||||||||||||||||||||||||||| | || |||| |||||| Sbjct 1609 TATGCTGTAATGTATGTTGCATTAAAAGGAGATGACAAGGAGTTTTACGTTGATATCAAG 1668 Query 1672 GAATATGAGATGCTATTTGAGAAGTTTGGAGGCTTTGATGCTCTATACCTTAAAATGCTT 1731 ||||||||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||| Sbjct 1669 GAATATGAGATGCTATTTGAGAAATTTGGAGGGTTTGATGCTCTGTACCTCAAAATGCTT 1728 Query 1732 GCTTGTGGAATCCCAACTTCTGTTCATCTGATGTGGATACCCATGTCAGAGCTAAGTCTT 1791 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1729 GCTTGTGGAATCCCAACTTCTGTTCATCTGATGTGGATACCCATGTCAGAGCTAAGTCTT 1788 Query 1792 CAACAACAGTTTCTGTTGGTTACAAGGGTGGTTTCTCGAGTCTTTAACGCATTGAGGAAG 1851 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1789 CAACAACAGTTTCTGTTGGTTACAAGGGTGGTTTCTCGAGTCTTTAACGCATTGAGGAAG 1848 Query 1852 ACTCAAGTTGTATCAAATGCGAAGGATACTGTAATAGAGAGAATACAG-AATATAAACGA 1910 ||||||||||||||||||||||||||||| ||| |||||| |||| || ||||||||||| Sbjct 1849 ACTCAAGTTGTATCAAATGCGAAGGATACAGTATTAGAGAAAATA-AGGAATATAAACGA 1907 Query 1911 TGACATTATGATGGCGGTCGTGTTTCCAGTTATCGAATTTATCATTCCTTACCAGTTAAG 1970 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1908 TGACATTATGATGGCGGTTGTGTTTCCAGTTATCGAATTTATCATTCCTTACCAGTTAAG 1967 Query 1971 GCTGCGTCTGGGAATGGCTTGGCCGGAAGAAATAGAACAGACTGTTGGCTCAACATGGTA 2030 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1968 GCTGCGTCTGGGAATGGCTTGGCCAGAAGAAATAGAACAGACTGTTGGCTCAACATGGTA 2027 Query 2031 CTTACAATGGCAGTCTGAAGCAGAGATGAACTTCAAGTCCCGCAATACAGAAGATTTTAA 2090 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| | Sbjct 2028 CTTACAATGGCAGTCTGAAGCAGAAATGAATTTCAAGTCCCGCAATACAGAAGATTTTCA 2087 Query 2091 GTGGTTCCTCTGGTTTCTAATTCGAAGTTCTATATACGGGTTTGTTTTGTATCATGTTTT 2150 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 2088 GTGGTTCCTCTGGTTTCTAATTCGAAGTTCTATATACGGGTTTGTTTTGTATCACGTTTT 2147 Query 2151 CCGCTTTCTGAAAAGAAAGGTTCCAAGACTTCTTGGCTATGGACCCTTCCGCCGAGATCC 2210 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2148 CCGCTTTCTAAAAAGAAAGGTTCCAAGACTTCTTGGCTATGGACCCTTCCGCCGAGATCC 2207 Query 2211 AAACGTACGGAAATTCTGGAGAGTGAAATCATATTTTACTTATAGAAAAAGGAGAATCAA 2270 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 2208 CAACGTACGGAAATTCTGGAGAGTGAAATCATATTTCACTTATAGAAAAAGGAGAATCAA 2267 Query 2271 ACAAAAGAGAAAGGCTGGAATCGACCCCATAAAAACTGCATTCGACAGAATGAAGAGAGT 2330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2268 ACAAAAGAGAAAGGCTGGAATCGACCCCATAAAAACTGCATTCGACAGAATGAAGAGAGT 2327 Query 2331 GAAAAATCCACCAATCCCATTAAAAAACTTTGCTAGTATTGAGTCTATGAGAGAAGAAAT 2390 |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 2328 GAAAAATCCACCTATCCCATTAAAGAACTTTGCTAGTATTGAGTCTATGAGAGAAGAAAT 2387 Query 2391 CAATGAGGTTGTAGCATTTTTACAGAATCCAAAGGCATTTCAGGAGATGGGTGCCAGAGC 2450 ||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| | || Sbjct 2388 CAACGAGGTTGTGGCATTTTTACAGAATCCAAAGGCATTTCAGGAGATGGGAGCCCGCGC 2447 Query 2451 ACCTCGGGGAGTTCTTATTGTGGGTGAGAGAGGAACGGGAAAGACGTCACTGGCGCTCGC 2510 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2448 ACCTCGGGGCGTTCTTATTGTGGGTGAGAGAGGAACGGGAAAGACGTCACTGGCGCTCGC 2507 Query 2511 TATAGCAGCCGAAGCAAGAGTGCCTGTTGTTAATGTTGAAGCTCAAGAGTTGGAAGCTGG 2570 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 2508 TATAGCAGCCGAAGCAAGAGTGCCTGTTGTCAATGTTGAAGCTCAAGAGTTGGAAGCTGG 2567 Query 2571 ACTATGGGTTGGTCAAAGTGCAGCGAATGTCAGGGAACTCTTTCAAACTGCAAGAGACTT 2630 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2568 GCTATGGGTTGGTCAAAGTGCAGCGAATGTCAGGGAACTCTTTCAAACTGCAAGAGACTT 2627 Query 2631 GGCACCTGTTATCATTTTTGTGGAGGATTTTGACCTCTTTGCCGGTGTACGCGGGAAGTT 2690 ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 2628 GGCACCTGTAATCATTTTTGTGGAGGATTTTGACCTCTTTGCTGGTGTACGCGGGAAGTT 2687 Query 2691 CGTACATACAAAACAGCAAGATCATGAATCGTTCATTAATCAGCTTCTTGTTGAACTTGA 2750 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2688 TGTACATACAAAACAGCAAGATCATGAATCGTTCATTAATCAGCTTCTTGTTGAACTTGA 2747 Query 2751 TGGCTTTGAGAAACAGGATGGCGTAGTTTTGATGGCGACGACACGAAATCATAAGCAAAT 2810 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2748 TGGCTTTGAGAAACAGGATGGCGTAGTTTTGATGGCGACGACACGAAATCATAAGCAAAT 2807 Query 2811 TGATGAGGCGTTAAGAAGGCCAGGTCGTATGGATAGAGTATTCCATCTTCAAAGTCCAAC 2870 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2808 TGATGAGGCGCTAAGAAGGCCAGGTCGTATGGATAGAGTATTCCATCTTCAAAGTCCAAC 2867 Query 2871 TGAAATGGAAAGGGAAAGGATTTTACACAACGCTGCAGAAGAAACCATGGACAGAGAACT 2930 ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct 2868 TGAAATGGAAAGGGAGAGGATTTTACACAACGCTGCAGAAGAAACCATGGACCGAGAACT 2927 Query 2931 CGTTGATTTAGTGGATTGGCGTAAGGTTTCGGAGAAGACAACTTTATTACGACCGATAGA 2990 ||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct 2928 CGTTGATCTAGTGGATTGGCGTAAGGTTTCAGAGAAGACAACTTTATTAAGACCGATAGA 2987 Query 2991 ACTGAAACTTGTTCCAATGGCTCTCGAAAGTAGTGCCTTCAGAAGCAAATTTCTGGACAC 3050 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2988 ACTGAAACTTGTTCCAATGGCTCTCGAAAGTAGTGCCTTCAGAAGCAAATTTCTGGACAC 3047 Query 3051 TGACGAACTTCTGAGTTATGTTAGCTGGTTTGCGACGTTTAGCCGTGTAGTGCCCTCATG 3110 |||||||||||||||||| ||||||||||||||||||||||||| | |||||||| |||| Sbjct 3048 TGACGAACTTCTGAGTTACGTTAGCTGGTTTGCGACGTTTAGCCATATAGTGCCCCCATG 3107 Query 3111 GCTGCGGAAAACTAAAGTTGCAAAGACAATGGGCAAAATGCTTGTGAATCATCTTGGACT 3170 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3108 GCTGCGAAAAACTAAAGTTGCAAAGACAATGGGCAAAATGCTTGTGAATCATCTTGGACT 3167 Query 3171 CAACTTAACCAAAGAAGATTTGGAGAATGTGGTTGATCTGATGGAACCATATGGACAAAT 3230 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 3168 TAACTTAACCAAAGATGATTTGGAGAATGTGGTTGATCTGATGGAACCATATGGACAAAT 3227 Query 3231 AAGCAATGGAATAGAACTTTTGAATCCTCCTGTTGATTGGACGAGGGAGACAAAGTTCCC 3290 ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 3228 AAGTAATGGAATAGAACTTTTGAATCCTACTGTTGATTGGACGAGGGAGACAAAGTTCCC 3287 Query 3291 ACATGCTGTCTGGGCGGCTGGTCGTGCTCTCATCACACTTCTAATACCAAACTTCGATGT 3350 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 3288 ACATGCTGTCTGGGCGGCTGGTCGTGCTCTCATCACACTTCTAATACCAAACTTTGATGT 3347 Query 3351 TGTGGAAAATCTTTGGCTTGAGCCTAGTTCCTGGGAGGGAATTGGGTGTACAAAAATCAC 3410 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 3348 TGTGGAAAATCTTTGGCTTGAGCCTAGTTCCTGGGAAGGAATTGGGTGTACAAAAATCAC 3407 Query 3411 CAAGGTCACAAGTGGAGGCTCTGCGATTGGGAATACAGAATCAAGATCGTATCTTGAAAA 3470 ||||||||||||||||||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct 3408 CAAGGTCACAAGTGGAGGCTCCGCGATTGGGAACACGGAATCAAGATCATATCTTGAAAA 3467 Query 3471 GAAGCTCGTTTTCTGCTTTGGATCCCACATTGCATCCCAAATGCTTCTCCCTCCCGGAGA 3530 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct 3468 GAAGCTCGTTTTCTGCTTTGGATCTCACATTGCATCCCAAATGCTTCTTCCTCCCGGAGA 3527 Query 3531 TGAAAATTTTCTTTCTTCTTCAGAAATAACTAAAGCGCAGGAGATTGCAACACGTATGGT 3590 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3528 TGAAAATTTTCTTTCTTCTTCAGAAATAACTAAAGCGCAGGAGATTGCAACACGTATGGT 3587 Query 3591 GCTTCAATATGGCTGGGGACCCGACGACAGTCCTGCAGTATACTATGCTACTAACGCGGT 3650 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 3588 GCTTCAATATGGCTGGGGACCCGATGACAGTCCTGCAGTATACTATGCTACTAACGCGGT 3647 Query 3651 TTCAGCTTTGAGTATGGGGAACATTCACGAATATGAAATGGCGGGTAAAGTTGAAAAGAT 3710 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 3648 TTCAGCTTTGAGTATGGGGAACAATCACGAATATGAAATGGCGGGTAAAGTTGAAAAGAT 3707 Query 3711 TTATGACTTAGCGTACGAAAAGGCAAAGGGAATGCTACTTAAAAATCG-CTGTGTCCTTG 3769 |||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| Sbjct 3708 TTATGACTTAGCGTACGAAAAGGCAAAGGGAATGCTCCTTAAAAATCGAC-GTGTCCTTG 3766 Query 3770 AGAAAATCACAGAGGAGCTACTCGAATTTGAGATCTTAACTCAGAAG 3816 |||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct 3767 AGAAAATCACAGAGGAGCTACTCGAATTTGAGATTTTAACTCATAAG 3813 Score = 121 bits (65), Expect = 7e-26 Identities = 67/68 (99%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 3818 CATTGTCAAGGAGTTTTCTTGATGTTGGAGATCCGCCAGAGACTGCACTTCTTAGTGCAC 3877 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 3896 CATTGTCAAGGAGTTTTCTTGATGTTGGAGATCCGCCAGAAACTGCACTTCTTAGTGCAC 3955 Query 3878 CAACCTAA 3885 |||||||| Sbjct 3956 CAACCTAA 3963 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 193544066094 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5