BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg903252
Length=3885
Score E
Sequences producing significant alignments: (Bits) Value
AT3G04340.1 | Symbols: emb2458 | FtsH extracellular protease fa... 6174 0.0
> AT3G04340.1 | Symbols: emb2458 | FtsH extracellular protease
family | chr3:1146800-1153341 REVERSE LENGTH=4106
Length=4106
Score = 6174 bits (3343), Expect = 0.0
Identities = 3670/3827 (96%), Gaps = 25/3827 (1%)
Strand=Plus/Plus
Query 1 ATGGATTTCATTTCCGCTTCTTCCATATCTTCACCC-TTTCTCACACAGTTGTCTCCGCT 59
|||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||| |
Sbjct 1 ATGGATTTCATTTCCGCTTCTTCCTTATCTTCACCCTTTTC-CACACAGTTGTCTCCGAT 59
Query 60 TTCTTTGAGCTCAGGTATAGTATCGTTAAAGCCTAGATATCGGGTCAAAAAACGAAACTT 119
|| |||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||
Sbjct 60 TTATTTGAGCTCAGGTATAGTATCGTTAAAGCCTAGACATCGAGTCAAAAATCGAAACTT 119
Query 120 TGGGTCTAGAGAATCC---AATAAATCTAGGAAATTTGTGCCCATTAGAGGCTGCTTTGG 176
|||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |
Sbjct 120 TGGGTCTAGAGAATCCAATAATAAATCTAGGAAAATTGTGCCCATTAGAGGCTGCTTT-G 178
Query 177 GTTTTCCGGCGTAAATGGGAGTTTTTTGAGGTCGAAACAGTCTGATTACGGGAATGAAGC 236
||||| | | ||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 179 GTTTTTC--C------GGGAGTTTTTTGAGGTCGAAACAGTCTGATTACGGTAGTGAAGC 230
Query 237 TGTTTCGGAATCATTGAGAGTAAGTGGAGAGGGAAATGAGCTTGTGCCATCGTCTGTGTA 296
||||||||||||||||||| || |||||||||||||||||||||||| ||| || | |||
Sbjct 231 TGTTTCGGAATCATTGAGATTATGTGGAGAGGGAAATGAGCTTGTGCTATCTTCCGAGTA 290
Query 297 T-A-A-CGCAAAGACGAGAGAGAGCGTAATACAGTTTGTGT-CAAAGCCTTTAGTTTACG 352
| | | ||||||||||||||||||||||||||||||||| | | |||||| |||||||||
Sbjct 291 TAATAGCGCAAAGACGAGAGAGAGCGTAATACAGTTTGT-TACCAAGCCTCTAGTTTACG 349
Query 353 TCTTATTTTGTATTGCAATTGGGTTTTCGCCAATTCACTCTTTTCAAGCTCCAGCTTTAG 412
||| ||||||||||||||||| |||| || |||| |||||||||||||||||||||||
Sbjct 350 CCTTGTTTTGTATTGCAATTGGACTTTCTCCGATTCGCTCTTTTCAAGCTCCAGCTTTAG 409
Query 413 CTGTGCCTTTCGTCAGTGATGTGATTTGGAAGAAAAAGAAAGAGACAGTGAAAGATAAAG 472
|||||||||||||||||||||| |||||||||||||||||||||| ||||| ||| ||||
Sbjct 410 CTGTGCCTTTCGTCAGTGATGTTATTTGGAAGAAAAAGAAAGAGAGAGTGAGAGAGAAAG 469
Query 473 AGGTGGTTTTGAAAGCAGTTGATCATGAGTTCTCGGATTATACACGGAGATTGTTGGAGA 532
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 470 AGGTGGTTTTGAAAGCAGTTGATCATGAGTTCTCGGATTATACTCGGAGATTGTTGGAGA 529
Query 533 CAGTCTCGGTTTTACTGAAGACTATTGACA-AGGTTAGAAAGGAAAATGGAGATGTTGCT 591
|||||||||||||||||||||||||||| | | |||||||||||||||||||| ||||||
Sbjct 530 CAGTCTCGGTTTTACTGAAGACTATTGAGATA-GTTAGAAAGGAAAATGGAGAGGTTGCT 588
Query 592 GAAGTGGGAACGGCTTTGGATGCAGTAAAGGTGGAGAAGGAGAAACTGCAGAAAGAGATA 651
||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 589 GAAGTGGGAGCGGCTTTGGATGCAGTTAAGGTGGAGAAGGAGAAACTGCAGAAGGAGATA 648
Query 652 ATGAGTGGATTATATCGTGATATGAGGCGGTTGAGGAAGGAGAGAGATGTGTTAATGAAA 711
|||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 649 ATGAGTGGGTTATATCGTGATATGAGGCGGTTGAGGAAGGAGAGAGATTTGTTAATGAAA 708
Query 712 CGAGCTGATGGGATTGTAGATGAGGCCCTAAGATTGAAGAAAGAGAGTGAAAAACTGTTG 771
||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct 709 CGAGCTGATAAAATTGTAGATGAGGCCCTAAGTTTGAAGAAACAGAGTGAAAAACTGTTG 768
Query 772 AGAAAAGGTGCTAGGGAGAAAGTGGAGAAACTGGAAGAGAGTGTGGATATAATGGAGAGT 831
||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct 769 AGAAAAGGTGCTAGGGAGAAAATGGAGAAACTGGAAGAGAGTGTGGATATTATGGAGAGC 828
Query 832 GATTACAACAAGATGTGGGAAAGAATAGATGAGATTGATGATATCATTTTAAATAAAGAG 891
|| ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 829 GAGTACAATAAGATATGGGAAAGAATAGATGAGATTGATGATATCATTTTAAAGAAAGAG 888
Query 892 ACAACAACATTGAGTTTTGGGGTTAGGGAGCTTATTTTCATCGAAAGAGAGTGTGTGGAG 951
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 889 ACAACAACATTGAGTTTTGGGGTTAGGGAGCTTATTTTCATTGAAAGAGAGTGTGTAGAG 948
Query 952 TTGGTTAAGAGCTTCAACAGAGAAACGAATCAAAAAAGTTCTGAAAGTGCTCCTGAAAGC 1011
|||||||||||||||||| ||||| |||||||||||||| |||||||| ||||||||||
Sbjct 949 TTGGTTAAGAGCTTCAACCGAGAATTGAATCAAAAAAGTTTTGAAAGTGTTCCTGAAAGC 1008
Query 1012 TCCATTACAAAACTCTCGAGGTCTGAGATTAAGCAGGAATTAGTGAACGCTCAAAGAAAG 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1009 TCCATTACAAAACTCTCGAGGTCTGAGATTAAGCAGGAATTAGTGAACGCTCAAAGAAAG 1068
Query 1072 CACTTGGAACAAATGATACTGCCTAATGTTTTGGAACTAGAGGAGGTTGATCCCTTTTTC 1131
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1069 CACTTGGAACAAATGATACTGCCCAATGTTTTGGAACTAGAGGAGGTTGATCCCTTTTTC 1128
Query 1132 AATCGTGACTCAGTGGATTTTTCTCTACGCATCAAAAAACGCCTTGAGGAATCAAAAAAG 1191
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1129 GATCGTGACTCAGTGGATTTTTCTCTACGCATCAAAAAACGCCTTGAGGAATCAAAAAAG 1188
Query 1192 CTGCAGAGAGATCTTCAGAATCGTATCAGAAAACGTATGAAAAAGTTTGGTGAAGAAAAG 1251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1189 CTGCAGAGAGATCTTCAGAATCGTATCAGAAAACGTATGAAAAAGTTTGGTGAAGAAAAG 1248
Query 1252 CTTTTTGTTCAAAAGACTCCAGAAGGTGAAGCTGTCAAAGGATTTCCTGAAGCCGAGGTG 1311
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 1249 CTTTTTGTTCAAAAGACTCCAGAAGGTGAAGCTGTCAAGGGATTTCCTGAAGCAGAGGTG 1308
Query 1312 AAATGGATGTTTGGAGACAAGGAGGTGGTCGTTCCGAAAGCCATCCAGCTCCATCTACGC 1371
||||||||||||||||| || |||||||| ||||||||||| ||||||||||||||||||
Sbjct 1309 AAATGGATGTTTGGAGAGAAAGAGGTGGTTGTTCCGAAAGCTATCCAGCTCCATCTACGC 1368
Query 1372 CATGGTTGGAAAAAGTGGCAGGAAGAAGCAAAAGCCGATTTGAAACAGAAACTTTTGGAA 1431
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1369 CATGGTTGGAAAAAGTGGCAGGAAGAAGCAAAAGCCGATTTAAAACAGAAACTTTTGGAA 1428
Query 1432 GATGTTGATTTTGGTAAACAATATATTGCGCAGAGACAGGAACAAGTTCTCCTGGATCGA 1491
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1429 GATGTTGATTTTGGCAAACAATATATTGCGCAGAGACAGGAACAAGTTCTCCTGGATCGA 1488
Query 1492 GATAGAGTTGTTTCAAAGACATGGTATAACGAAGACAAAAATAGGTGGGAGATGGACCCT 1551
|||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct 1489 GATAGAGTTGTTTCGAAGACTTGGTATAACGAAGACAAAAGTAGGTGGGAGATGGACCCT 1548
Query 1552 ATGGCTGTTCCATATGCAGTTTCCAGGAAGCTGATTGACAGTGCCAGGATTAGGCATGAT 1611
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1549 ATGGCTGTTCCCTACGCAGTTTCCAGGAAGCTGATTGACAGTGCCAGGATTAGGCATGAT 1608
Query 1612 TATGCTGTAATGTATGTTGCATTAAAAGGAGATGACAAGGAGTATCACATTGACATCAAG 1671
||||||||||||||||||||||||||||||||||||||||||| | || |||| ||||||
Sbjct 1609 TATGCTGTAATGTATGTTGCATTAAAAGGAGATGACAAGGAGTTTTACGTTGATATCAAG 1668
Query 1672 GAATATGAGATGCTATTTGAGAAGTTTGGAGGCTTTGATGCTCTATACCTTAAAATGCTT 1731
||||||||||||||||||||||| |||||||| ||||||||||| ||||| |||||||||
Sbjct 1669 GAATATGAGATGCTATTTGAGAAATTTGGAGGGTTTGATGCTCTGTACCTCAAAATGCTT 1728
Query 1732 GCTTGTGGAATCCCAACTTCTGTTCATCTGATGTGGATACCCATGTCAGAGCTAAGTCTT 1791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1729 GCTTGTGGAATCCCAACTTCTGTTCATCTGATGTGGATACCCATGTCAGAGCTAAGTCTT 1788
Query 1792 CAACAACAGTTTCTGTTGGTTACAAGGGTGGTTTCTCGAGTCTTTAACGCATTGAGGAAG 1851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1789 CAACAACAGTTTCTGTTGGTTACAAGGGTGGTTTCTCGAGTCTTTAACGCATTGAGGAAG 1848
Query 1852 ACTCAAGTTGTATCAAATGCGAAGGATACTGTAATAGAGAGAATACAG-AATATAAACGA 1910
||||||||||||||||||||||||||||| ||| |||||| |||| || |||||||||||
Sbjct 1849 ACTCAAGTTGTATCAAATGCGAAGGATACAGTATTAGAGAAAATA-AGGAATATAAACGA 1907
Query 1911 TGACATTATGATGGCGGTCGTGTTTCCAGTTATCGAATTTATCATTCCTTACCAGTTAAG 1970
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1908 TGACATTATGATGGCGGTTGTGTTTCCAGTTATCGAATTTATCATTCCTTACCAGTTAAG 1967
Query 1971 GCTGCGTCTGGGAATGGCTTGGCCGGAAGAAATAGAACAGACTGTTGGCTCAACATGGTA 2030
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1968 GCTGCGTCTGGGAATGGCTTGGCCAGAAGAAATAGAACAGACTGTTGGCTCAACATGGTA 2027
Query 2031 CTTACAATGGCAGTCTGAAGCAGAGATGAACTTCAAGTCCCGCAATACAGAAGATTTTAA 2090
|||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |
Sbjct 2028 CTTACAATGGCAGTCTGAAGCAGAAATGAATTTCAAGTCCCGCAATACAGAAGATTTTCA 2087
Query 2091 GTGGTTCCTCTGGTTTCTAATTCGAAGTTCTATATACGGGTTTGTTTTGTATCATGTTTT 2150
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2088 GTGGTTCCTCTGGTTTCTAATTCGAAGTTCTATATACGGGTTTGTTTTGTATCACGTTTT 2147
Query 2151 CCGCTTTCTGAAAAGAAAGGTTCCAAGACTTCTTGGCTATGGACCCTTCCGCCGAGATCC 2210
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2148 CCGCTTTCTAAAAAGAAAGGTTCCAAGACTTCTTGGCTATGGACCCTTCCGCCGAGATCC 2207
Query 2211 AAACGTACGGAAATTCTGGAGAGTGAAATCATATTTTACTTATAGAAAAAGGAGAATCAA 2270
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2208 CAACGTACGGAAATTCTGGAGAGTGAAATCATATTTCACTTATAGAAAAAGGAGAATCAA 2267
Query 2271 ACAAAAGAGAAAGGCTGGAATCGACCCCATAAAAACTGCATTCGACAGAATGAAGAGAGT 2330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2268 ACAAAAGAGAAAGGCTGGAATCGACCCCATAAAAACTGCATTCGACAGAATGAAGAGAGT 2327
Query 2331 GAAAAATCCACCAATCCCATTAAAAAACTTTGCTAGTATTGAGTCTATGAGAGAAGAAAT 2390
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2328 GAAAAATCCACCTATCCCATTAAAGAACTTTGCTAGTATTGAGTCTATGAGAGAAGAAAT 2387
Query 2391 CAATGAGGTTGTAGCATTTTTACAGAATCCAAAGGCATTTCAGGAGATGGGTGCCAGAGC 2450
||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| | ||
Sbjct 2388 CAACGAGGTTGTGGCATTTTTACAGAATCCAAAGGCATTTCAGGAGATGGGAGCCCGCGC 2447
Query 2451 ACCTCGGGGAGTTCTTATTGTGGGTGAGAGAGGAACGGGAAAGACGTCACTGGCGCTCGC 2510
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2448 ACCTCGGGGCGTTCTTATTGTGGGTGAGAGAGGAACGGGAAAGACGTCACTGGCGCTCGC 2507
Query 2511 TATAGCAGCCGAAGCAAGAGTGCCTGTTGTTAATGTTGAAGCTCAAGAGTTGGAAGCTGG 2570
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2508 TATAGCAGCCGAAGCAAGAGTGCCTGTTGTCAATGTTGAAGCTCAAGAGTTGGAAGCTGG 2567
Query 2571 ACTATGGGTTGGTCAAAGTGCAGCGAATGTCAGGGAACTCTTTCAAACTGCAAGAGACTT 2630
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2568 GCTATGGGTTGGTCAAAGTGCAGCGAATGTCAGGGAACTCTTTCAAACTGCAAGAGACTT 2627
Query 2631 GGCACCTGTTATCATTTTTGTGGAGGATTTTGACCTCTTTGCCGGTGTACGCGGGAAGTT 2690
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2628 GGCACCTGTAATCATTTTTGTGGAGGATTTTGACCTCTTTGCTGGTGTACGCGGGAAGTT 2687
Query 2691 CGTACATACAAAACAGCAAGATCATGAATCGTTCATTAATCAGCTTCTTGTTGAACTTGA 2750
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2688 TGTACATACAAAACAGCAAGATCATGAATCGTTCATTAATCAGCTTCTTGTTGAACTTGA 2747
Query 2751 TGGCTTTGAGAAACAGGATGGCGTAGTTTTGATGGCGACGACACGAAATCATAAGCAAAT 2810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2748 TGGCTTTGAGAAACAGGATGGCGTAGTTTTGATGGCGACGACACGAAATCATAAGCAAAT 2807
Query 2811 TGATGAGGCGTTAAGAAGGCCAGGTCGTATGGATAGAGTATTCCATCTTCAAAGTCCAAC 2870
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2808 TGATGAGGCGCTAAGAAGGCCAGGTCGTATGGATAGAGTATTCCATCTTCAAAGTCCAAC 2867
Query 2871 TGAAATGGAAAGGGAAAGGATTTTACACAACGCTGCAGAAGAAACCATGGACAGAGAACT 2930
||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2868 TGAAATGGAAAGGGAGAGGATTTTACACAACGCTGCAGAAGAAACCATGGACCGAGAACT 2927
Query 2931 CGTTGATTTAGTGGATTGGCGTAAGGTTTCGGAGAAGACAACTTTATTACGACCGATAGA 2990
||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct 2928 CGTTGATCTAGTGGATTGGCGTAAGGTTTCAGAGAAGACAACTTTATTAAGACCGATAGA 2987
Query 2991 ACTGAAACTTGTTCCAATGGCTCTCGAAAGTAGTGCCTTCAGAAGCAAATTTCTGGACAC 3050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2988 ACTGAAACTTGTTCCAATGGCTCTCGAAAGTAGTGCCTTCAGAAGCAAATTTCTGGACAC 3047
Query 3051 TGACGAACTTCTGAGTTATGTTAGCTGGTTTGCGACGTTTAGCCGTGTAGTGCCCTCATG 3110
|||||||||||||||||| ||||||||||||||||||||||||| | |||||||| ||||
Sbjct 3048 TGACGAACTTCTGAGTTACGTTAGCTGGTTTGCGACGTTTAGCCATATAGTGCCCCCATG 3107
Query 3111 GCTGCGGAAAACTAAAGTTGCAAAGACAATGGGCAAAATGCTTGTGAATCATCTTGGACT 3170
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3108 GCTGCGAAAAACTAAAGTTGCAAAGACAATGGGCAAAATGCTTGTGAATCATCTTGGACT 3167
Query 3171 CAACTTAACCAAAGAAGATTTGGAGAATGTGGTTGATCTGATGGAACCATATGGACAAAT 3230
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3168 TAACTTAACCAAAGATGATTTGGAGAATGTGGTTGATCTGATGGAACCATATGGACAAAT 3227
Query 3231 AAGCAATGGAATAGAACTTTTGAATCCTCCTGTTGATTGGACGAGGGAGACAAAGTTCCC 3290
||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 3228 AAGTAATGGAATAGAACTTTTGAATCCTACTGTTGATTGGACGAGGGAGACAAAGTTCCC 3287
Query 3291 ACATGCTGTCTGGGCGGCTGGTCGTGCTCTCATCACACTTCTAATACCAAACTTCGATGT 3350
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 3288 ACATGCTGTCTGGGCGGCTGGTCGTGCTCTCATCACACTTCTAATACCAAACTTTGATGT 3347
Query 3351 TGTGGAAAATCTTTGGCTTGAGCCTAGTTCCTGGGAGGGAATTGGGTGTACAAAAATCAC 3410
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 3348 TGTGGAAAATCTTTGGCTTGAGCCTAGTTCCTGGGAAGGAATTGGGTGTACAAAAATCAC 3407
Query 3411 CAAGGTCACAAGTGGAGGCTCTGCGATTGGGAATACAGAATCAAGATCGTATCTTGAAAA 3470
||||||||||||||||||||| ||||||||||| || ||||||||||| |||||||||||
Sbjct 3408 CAAGGTCACAAGTGGAGGCTCCGCGATTGGGAACACGGAATCAAGATCATATCTTGAAAA 3467
Query 3471 GAAGCTCGTTTTCTGCTTTGGATCCCACATTGCATCCCAAATGCTTCTCCCTCCCGGAGA 3530
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 3468 GAAGCTCGTTTTCTGCTTTGGATCTCACATTGCATCCCAAATGCTTCTTCCTCCCGGAGA 3527
Query 3531 TGAAAATTTTCTTTCTTCTTCAGAAATAACTAAAGCGCAGGAGATTGCAACACGTATGGT 3590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3528 TGAAAATTTTCTTTCTTCTTCAGAAATAACTAAAGCGCAGGAGATTGCAACACGTATGGT 3587
Query 3591 GCTTCAATATGGCTGGGGACCCGACGACAGTCCTGCAGTATACTATGCTACTAACGCGGT 3650
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 3588 GCTTCAATATGGCTGGGGACCCGATGACAGTCCTGCAGTATACTATGCTACTAACGCGGT 3647
Query 3651 TTCAGCTTTGAGTATGGGGAACATTCACGAATATGAAATGGCGGGTAAAGTTGAAAAGAT 3710
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 3648 TTCAGCTTTGAGTATGGGGAACAATCACGAATATGAAATGGCGGGTAAAGTTGAAAAGAT 3707
Query 3711 TTATGACTTAGCGTACGAAAAGGCAAAGGGAATGCTACTTAAAAATCG-CTGTGTCCTTG 3769
|||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||
Sbjct 3708 TTATGACTTAGCGTACGAAAAGGCAAAGGGAATGCTCCTTAAAAATCGAC-GTGTCCTTG 3766
Query 3770 AGAAAATCACAGAGGAGCTACTCGAATTTGAGATCTTAACTCAGAAG 3816
|||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 3767 AGAAAATCACAGAGGAGCTACTCGAATTTGAGATTTTAACTCATAAG 3813
Score = 121 bits (65), Expect = 7e-26
Identities = 67/68 (99%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 3818 CATTGTCAAGGAGTTTTCTTGATGTTGGAGATCCGCCAGAGACTGCACTTCTTAGTGCAC 3877
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 3896 CATTGTCAAGGAGTTTTCTTGATGTTGGAGATCCGCCAGAAACTGCACTTCTTAGTGCAC 3955
Query 3878 CAACCTAA 3885
||||||||
Sbjct 3956 CAACCTAA 3963
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 193544066094
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5