BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg903326 Length=240 Score E Sequences producing significant alignments: (Bits) Value AT3G04943.1 | Symbols: LCR41 | low-molecular-weight cysteine-ri... 361 2e-99 > AT3G04943.1 | Symbols: LCR41 | low-molecular-weight cysteine-rich 41 | chr3:1368248-1368678 REVERSE LENGTH=246 Length=246 Score = 361 bits (195), Expect = 2e-99 Identities = 232/248 (94%), Gaps = 10/248 (4%) Strand=Plus/Plus Query 1 ATGAAAAACTCTTCTCTT-TTATTCATAC-TAAT-T-G---TCGTTATTTCTTCTTCAGA 53 |||||||||||||||||| || ||||||| || | | | ||||||||||||||||||| Sbjct 1 ATGAAAAACTCTTCTCTTCTT-TTCATACTTATTGTCGTTTTCGTTATTTCTTCTTCAGA 59 Query 54 AAACGGCAAAATGATAGGAGAAGCAAAAAAGTGTAGTAATTCATGGATTTGTGAAGGAGA 113 |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 60 AAACGGGATCATGATAGGAGAAGCAAAAAAGTGTAGTAATTCATGGATTTGTGAAGGAGA 119 Query 114 CGAGAAATGCAAAGAGAAGTGCATGGCTGACTACAAAGGCAATGGAACATGTTATTACCC 173 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 120 CGAGAAATGCAAAGAGAAGTGCATGGCTGACTACAAAGGCAATGGAACATGTTATTACCC 179 Query 174 ATCTCCTCCTTCAAAACAACATCCTGAGTT-TTCTTATCCTACATGCTGGTGTGGGTTTC 232 |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct 180 ATCTCCTCCTTCAAAACAACATCCTGAGTTCTT-TTATCCTACATGCTGGTGTGGGTTTG 238 Query 233 AGTGTTAA 240 | |||||| Sbjct 239 ATTGTTAA 246 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 10857833784 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5