BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg903431
Length=2772
Score E
Sequences producing significant alignments: (Bits) Value
AT3G05780.1 | Symbols: LON3 | lon protease 3 | chr3:1714941-171... 4392 0.0
AT3G05790.1 | Symbols: LON4 | lon protease 4 | chr3:1720154-172... 2030 0.0
AT5G26860.1 | Symbols: LON_ARA_ARA, LON1 | lon protease 1 | chr... 941 0.0
> AT3G05780.1 | Symbols: LON3 | lon protease 3 | chr3:1714941-1719608
REVERSE LENGTH=2775
Length=2775
Score = 4392 bits (2378), Expect = 0.0
Identities = 2625/2740 (96%), Gaps = 33/2740 (1%)
Strand=Plus/Plus
Query 57 TCGTCTACCTTCGTACGACGGTTTATTGCATCTTAGGCGGCAAAGCTTAAACCTAAATTC 116
|||||||||||||||| ||||||| |||||||||| | |||||||||| |||||||||
Sbjct 45 TCGTCTACCTTCGTACTACGGTTTCTTGCATCTTA--C-ACAAAGCTTAACCCTAAATTC 101
Query 117 TCGCGTTTTCTACGGTGCCCGTCATGTGACTCCTCCGGCTATTCGGGTCGGATCC-ATCC 175
|||||||||||||||||||| |||||||||||||||||||||||| |||||||| || |
Sbjct 102 CCGCGTTTTCTACGGTGCCCGCCATGTGACTCCTCCGGCTATTCGGATCGGATCCAAT-C 160
Query 176 CGGTTCAGAG--T-CTACTCTTCAGGGCACCGACTCAGCTAACCGGATGGACCCGGAG-T 231
|||||||||| | |||||||||||||||||||||||||| |||||||||| |||||| |
Sbjct 161 CGGTTCAGAGTCTACTACTCTTCAGGGCACCGACTCAGCTTACCGGATGGAACCGGAGTT 220
Query 232 -T---G-------GGGTCATCGTGTTTCTTTCTCCCATCGCAGTGACGGTCTCGATCTCT 280
| | ||||| |||||||||||||||| |||||||||||||| |||||||||
Sbjct 221 CTCGCGATTTATTGGGTCGTCGTGTTTCTTTCTCCGATCGCAGTGACGGTGTCGATCTCT 280
Query 281 TATCTTCTTCACCGATTGTCTCAACTAACCCTACCCTCGACGATTGTCTAACGGTTATAG 340
||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 281 TATCTTCTTCACCGATTCTCTCAACTAACCCTAACCTCGACGATTCTCTAACGGTTATAG 340
Query 341 CATTGCCATTGCCTCACAAGCCTCTTATTCCTGGCTTTTACATGCCAATCTATGTCAAGG 400
||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct 341 CATTGCCGTTGCCTCACAAACCTCTTATTCCTGGCTTTTACATGCCAATCCATGTCAAGG 400
Query 401 ATCCTAAAGTTCTTGCAGCTTTACAAGAGAGCACAAGACAACAATCTCCATATGTTGGGG 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 401 ATCCTAAAGTTCTTGCAGCTTTACAAGAGAGCACAAGACAACAATCTCCATATGTGGGGG 460
Query 461 CTTTCCTTTTGAAGGATGGCGCTTCTACTGATTCATCTTCTTGCTCTGAAAC--AA-ATA 517
||||||||||||||||| |||| |||||||||||||||||| |||||||||| || |||
Sbjct 461 CTTTCCTTTTGAAGGATTGCGCGTCTACTGATTCATCTTCTCGCTCTGAAACTGAAGATA 520
Query 518 ATGTTGTCCACAAGTTTaaaggcaaagggaaaccaaaaaagaaaagaagaaaagaGTTGC 577
||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 521 ATGTTGTTGAGAAGTTTAAAGTCAAAGGGAAACCAAAAAAGAAAAGAAGAAAAGAGTTGC 580
Query 578 TTAACCGTATTTACCAAGTGGGCACTCTTGCTCAGATTTCAAGTATCCAAGGTGAGCAAG 637
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 581 TTAACCGTATTCACCAAGTTGGCACTCTTGCTCAGATTTCAAGTATCCAAGGTGAGCAAG 640
Query 638 TCATCCTTGTTGGTCGCAGACGACTTCGAATAAAAGAGATGGTGAGTGAAGATCCTCTAA 697
|||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||
Sbjct 641 TCATCCTTGTTGGTCGCAGAAGACTTATAATAGAAGAGATGGTGAGTGAAGATCCTCTAA 700
Query 698 CCGTCA-ACGTTTACCATTTAAAGGATAAGCCATATGACAAGGACAATGCTGTCATCAAG 756
|||||| | ||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 701 CCGTCAGA-GTTGACCATCTAAAGGATAAGCCATATGACAAGGACAATGCTGTCATCAAG 759
Query 757 GCAAGCTACGTTGAAGTTATCTCGA-TGCTTAGGGATGTCTTAAAGATAAATTCACTCTG 815
|||||||||||||||||||| |||| | |||||||| |||||||||| ||||||||||||
Sbjct 760 GCAAGCTACGTTGAAGTTATTTCGACT-CTTAGGGAAGTCTTAAAGACAAATTCACTCTG 818
Query 816 GAGAGATCAAGATATAGGTGACTTCAGTTATCAACATTTAGCTGATTTTGGAGCCGGGAT 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 819 GAGAGATCAAGATATAGGTGACTTCAGTTATCAACATTTAGCTGATTTTGGAGCCGGGAT 878
Query 876 CTCTGGCGCTAACAAACATCAAAATCAGGGGGTTCTTATAGAACTGGATGTTCATAAACG 935
||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct 879 CTCTGGCGCTAACAAACATAAAAATCAGGGGGTTCTTACAGAACTGGATGTTCATAAACG 938
Query 936 TCTGGAGTTGACGTTGGAATTGGTGAAAAAACAAGTAGAAATTAACAAGATTAAAGAGAC 995
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 939 TCTAGAGTTGACGTTGGAATTGGTGAAAAAACAAGTAGAAATTAACAAGATTAAAGAGAC 998
Query 996 AGACGACGGATCTTCACTTTCTGCAAAGATAAGGGTAAGGATTGATACTAATAGAGA-AA 1054
||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 999 AGATGACGGATCTTCACTTTCTGCAAAGATAAGGGTAAGGATTGATACTAAAAGAGACAA 1058
Query 1055 ACATTCCAAAACATGTATTAAAAGTCATGGAAGAAGAGTTTACAAAGCTGGAGATGTTAG 1114
| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1059 A-ATTCCAAAACATGTAATAAAAGTCATGGAAGAAGAGTTTACAAAGCTGGAGATGTTAG 1117
Query 1115 AAGACAATTATAGCGACTTCGATTTGACCTATAACTACCTTGATTGGTTGACCGTGCTGC 1174
|||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1118 AAGAAAACTATAGCGACTTCGATTTGACCTATAACTACCTTCATTGGTTGACCGTGCTGC 1177
Query 1175 CTTGGGGAAATTTCAGTTATGAGAATTTTGATGTCCTACGGGCAAAAAAGATTCTTGACG 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1178 CTTGGGGAAATTTCAGTTATGAGAATTTTGATGTCCTACGGGCAAAAAAGATTCTTGACG 1237
Query 1235 AGGATCATTACGGATTATCTGATGTAAAAGAAAGAATATTAGAGTTTATTGCTGTGGGAA 1294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1238 AGGATCATTACGGATTATCTGATGTAAAAGAAAGAATATTAGAGTTTATTGCTGTGGGAA 1297
Query 1295 GACTTAGAGGCACTTCACAAGGGAAAATCATTTGTCTATCTGGCCCACCTGGAGTAGGTA 1354
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 1298 GACTTAGAGGCACTTCACAAGGGAAGATCATTTGTCTCTCTGGCCCACCTGGAGTAGGTA 1357
Query 1355 AAACTAGCATTGGGCGTTCAATTGCACGTGCTCTTGACCGCAAGTTCTTCCGGTTCGCTG 1414
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1358 AAACTAGCATTGGGCGTTCAATTGCACGTGCTCTTGACCGCAAGTTCTTCCGGTTCTCTG 1417
Query 1415 TTGGAGGACTATCTGATGTTGGC-GAGATTAAGGGGCATTGTCAAACATATGTTGGTGCC 1473
||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 1418 TTGGAGGACTATCCGATGTT-GCTGAGATTAAGGGGCATTGTCAAACATATGTTGGTGCC 1476
Query 1474 ATGCCTGGAAAGATGGTGCAATGTCTAAAGAGTGTGGGAACAGAAAATCCTCTTATTCTG 1533
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct 1477 ATGCCTGGAAAGATGGTGCAATGTCTAAAGAGTGTGGGAACAGCAAATCCTCTTATTTTG 1536
Query 1534 ATCGATGAGATTGATAAGCTTGATAGGTGCCACACTGGCGACCCAGCCAGTGCGTTGTTG 1593
|||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1537 TTCGACGAGATTGATAAGCTTGGTAGGTGCCACACTGGCGACCCAGCCAGTGCGTTGTTG 1596
Query 1594 GAGGTTATGGATCCAGAGCAGAATGC-AAATTTTCTAGACCACTTTCTCAATGTTACTAT 1652
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct 1597 GAGGTTATGGATCCAGAGCAGAATGCAAAATTTT-TAGACCACTTTCTCAATGTTACTAT 1655
Query 1653 TGACTTATCAAAGGTTTTATTTGTATGCACTGCAAATGTGATAGAAATGATTCCGGGTCC 1712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1656 TGACTTATCAAAGGTTTTATTTGTATGCACTGCAAATGTGATAGAAATGATTCCGGGTCC 1715
Query 1713 TCTGCTAGACAGAATGGAGGTGATTGATCTCTCTGGGTATGTTACTGATGAGAAAATGCA 1772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1716 TCTGCTAGACAGAATGGAGGTGATTGATCTCTCTGGGTATGTTACTGATGAGAAAATGCA 1775
Query 1773 TATTGCTAGAGACTATTTGGTGAAAAAGACATGCAGAGATTGTGGCATTAAGCCTGAACA 1832
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1776 TATTGCTAGAGACTATTTGGTGAAAAAGACATGCAGAGATTGCGGCATTAAGCCTGAACA 1835
Query 1833 GGTTGATTTGAGTGATGCAGCTCTTCTTTCCTTGATAGAAAATTACTGCAGAGAAGCAGG 1892
|||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 1836 TGTTGATTTGAGTGATGCAGCTCTTCTTTCCTTGATAGAAAATTATTGTAGAGAAGCAGG 1895
Query 1893 AGTTAGAAATCTCCAAAAGCAGATTGAGAAGATTTACCGTAAGGTTGCTCTTGAACTAGT 1952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1896 AGTTAGAAATCTCCAAAAGCAGATTGAGAAGATTTACCGTAAGGTTGCTCTTGAACTAGT 1955
Query 1953 ACGCCAAGGAGCAGTTTCTTTTTATGTTACTGACACTAAAGATACTAAATCTTCGGCCAA 2012
|||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct 1956 ACGCCAAGGAGCAGTTTCTTTTGATGTTACTGACACTAAAGATACTAAATCTTTGGCCAA 2015
Query 2013 GACCGATTCGGAGGTTAAGGGAATGAAAGTGGCTGATATTATGAAGATACTTGAATCAGC 2072
||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct 2016 GACCGATTCAGAGGTTAAGAGAATGAAAGTGGCTGATATTATGAAGATACTCGAATCAGC 2075
Query 2073 AACTGGGGATTCAACAGAATCAAAGACTAAGCAGAGCGGAGTGGTAGCTAAAACGTTTAA 2132
||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||| |
Sbjct 2076 AACTGGGGACTCAACAGAATCAAAGACTAAGCAGAGCGGATTGGTAGCTAAAACCTTTGA 2135
Query 2133 AAAGGTTATGATTGATGAATCAAACCTTGCAGATTATGTAGGCAAACCAGTATTCCAGGA 2192
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2136 AAAGGTTATGATTGATGAATCAAACCTTGCAGATTACGTAGGCAAACCAGTATTCCAGGA 2195
Query 2193 AGAGAAGATCTATGAACAGACACCTGTTGGGGTTGTGATGGGTCTAGCTTGGACATCCAT 2252
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2196 AGAGAAGATCTATGAACAGACACCTGTCGGGGTTGTGATGGGTCTAGCTTGGACATCCAT 2255
Query 2253 GGGTGGCTCAACGTTGTACATAGAGACAACCTTTGTAGAAGAAGGAGAGGGAAAAGGTGG 2312
||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct 2256 GGGTGGCTCAACGTTGTACATCGAGACAACCTTTGTAGAAGAAGGATTGGGAAAAGGTGG 2315
Query 2313 TCTTCATATAACGGGTCAGCTTGGGGATGTGATGAAAGAAAGCGCAGAGATCGCTCACAC 2372
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct 2316 TCTTCATATAACGGGTCAGCTTGGGGATGTGATGAAAGAAAGCGCACAGATTGCTCACAC 2375
Query 2373 AGTCGCTAGAAGAATAATGTTTGAGAAAGAACCAGAGAACCTCTTTTTTGCGAATTCCAA 2432
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2376 AGTCGCTAGAAGAATAATGTTTGAGAAAGAACCGGAGAACCTCTTTTTTGCGAATTCCAA 2435
Query 2433 GCTTCATTTACATGTTCCTGAAGGAGCCACACCAAAAGACGGTCCAAGTGCAGGCTGCAC 2492
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 2436 GCTTCATTTACATGTTCCTGAAGGAGCCACACCAAAAGATGGCCCAAGTGCAGGCTGCAC 2495
Query 2493 CATGATCACTTCGTTCCTATCACTTGCCATGAAGAAGCTTGTAAGGAAGGATCTTGCAAT 2552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2496 CATGATCACTTCGTTCCTATCACTTGCCATGAAGAAGCTTGTAAGGAAGGATCTTGCAAT 2555
Query 2553 GACCGGAGAAGTCACTCTAACTGGTAGAATTCTTCCAATTGGTGGCGTTAAGGAGAAGAC 2612
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2556 GACTGGAGAAGTCACTCTAACTGGTAGAATTCTTCCAATTGGTGGCGTTAAGGAGAAGAC 2615
Query 2613 TATAGCTGCAAAACGGAGTCAGATCAAAACAATAATATTCCCGGAGGCAAATCGGAGAGA 2672
||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 2616 TATAGCTGCAAGACGGAGTCAGATCAAGACAATAATATTCCCGGAAGCAAATCGGAGAGA 2675
Query 2673 CTTTGAGGAGCTTGCGGAAAACATGAAAGAAGGGCTTGATGTTCACTTCGTGGATGAATA 2732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2676 CTTTGAGGAGCTTGCGGAAAACATGAAAGAAGGGCTTGATGTTCACTTCGTGGATGAATA 2735
Query 2733 TGAGAAGATATTCGATCTAGCATTCAATTATGACCATTAG 2772
||||||||||||||||||||||||||||||||||||||||
Sbjct 2736 TGAGAAGATATTCGATCTAGCATTCAATTATGACCATTAG 2775
> AT3G05790.1 | Symbols: LON4 | lon protease 4 | chr3:1720154-1725182
REVERSE LENGTH=2829
Length=2829
Score = 2030 bits (1099), Expect = 0.0
Identities = 1590/1822 (87%), Gaps = 53/1822 (3%)
Strand=Plus/Plus
Query 991 GAGACAGACGA-CGGATCTTCACTTTCTGCAAAGATAAGGGTAAGGATTGATACTAATAG 1049
||||||||| | | |||| ||||||||| |||| | |||| |||||||| ||| ||
Sbjct 1021 GAGACAGAC-AGCAAATCTGCACTTTCTGAAAAGTTTAGGGGGAGGATTGACCCTATTAA 1079
Query 1050 AGAAAACATTCCAAAACATGTATTAAAAGTCATGGAAGAAGAGTTTACAAAGCTGGAGAT 1109
||| || |||||| ||||||| |||||||||| ||||||||| ||| ||| ||| || |
Sbjct 1080 AGACAAGATTCCAGGACATGTACTAAAAGTCATAGAAGAAGAGCTTAAAAAACTGCAGCT 1139
Query 1110 GTTAGAAGA-CAATTATAGCGACTTCGATTTGACCTATAACTACCTTGATTGGTTGACCG 1168
||||||| | || || |||||| |||||| |||| | |||||||||||||||||||||||
Sbjct 1140 GTTAGAA-ACCAGTTCTAGCGAATTCGATGTGACTTGTAACTACCTTGATTGGTTGACCG 1198
Query 1169 TGCTGCCTTGGGGAAATTTCAGTTATGAGAATTTTGATGTCCTACGGGCAAAAAAGATTC 1228
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct 1199 TGTTGCCTTGGGGAAATTTCAGTGATGAGAATTTTAATGTCCTACGGGCAGAAAAGATTC 1258
Query 1229 TTGACGAGGATCATTACGGATTATCTGATGTAAAAGAAAGAATATTAGAGTTTATTGCTG 1288
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1259 TTGACGAGGATCATTACGGATTATCTGATGTAAAAGAAAGAATACTAGAGTTTATTGCTG 1318
Query 1289 TGGGAAGACTTAGAGGCACTTCACAAGGGAAAATCATTTGTCTATCTGGCCCACCTGGAG 1348
||||| ||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||
Sbjct 1319 TGGGAGGACTTAGAGGCACTTCACAAGGGAAGATCATTTGTCTCTCTGGCCCAACTGGAG 1378
Query 1349 TAGGTAAAACTAGCATTGGGCGTTCAATTGCACGTGCTCTTGACCGCAAGTTCTTCCGGT 1408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1379 TAGGTAAAACTAGCATTGGGCGTTCAATTGCACGTGCTCTTGACCGCAAGTTCTTCCGGT 1438
Query 1409 TCGCTGTTGGAGGACTATCTGATGTTGGC-GAGATTAAGGGGCATTGTCAAACATATGTT 1467
|| |||||||||||||||| ||||||| | ||||||||||||||| ||| ||| ||| ||
Sbjct 1439 TCTCTGTTGGAGGACTATCCGATGTTG-CTGAGATTAAGGGGCATCGTCGAACGTATATT 1497
Query 1468 GGTGCCATGCCTGGAAAGATGGTGCAATGTCTAAAGAGTGTGGGAACAGAAAATCCTCTT 1527
|||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct 1498 GGTGCCATGCCTGGAAAGATGGTGCAGTGTCTAAAGAATGTGGGAACAGAAAATCCTCTT 1557
Query 1528 ATTCTGATCGATGAGATTGATAAGCTTG-A-T-AGGTGCCAC-ACTGGCGACCCAGCCAG 1583
||||||||||||||||||||||||||| | | ||| ||||| | |||||||||||||||
Sbjct 1558 GTTCTGATCGATGAGATTGATAAGCTTGGAGTTAGGGGCCACCA-TGGCGACCCAGCCAG 1616
Query 1584 TGCGTTGTTGGAGGTTATGGATCCAGAGCAGAATGCAAATTTTCTAGACCACTTTCTCAA 1643
||| |||||||| || |||||||||||||||||||||||||||||||||||| |||| |
Sbjct 1617 TGCAATGTTGGAGCTTTTGGATCCAGAGCAGAATGCAAATTTTCTAGACCACTATCTCGA 1676
Query 1644 TGTTACTATTGACTTATCAAAGGTTTTATTTGTATGCACTGCAAATGTGATAGAAATGAT 1703
|||| ||||||||||||| |||||||||||||||||||| ||||| |||| ||| | ||
Sbjct 1677 TGTTCCTATTGACTTATCCAAGGTTTTATTTGTATGCACAGCAAACGTGACAGATACCAT 1736
Query 1704 TCCGGGTCCTCTGCTAGACAGAATGGAGGTGATTGA-TCTCTCTGGGTATGTTACTGATG 1762
||||||||||||||||||||||||||||||||| | |||||| ||||| |||||||||
Sbjct 1737 TCCGGGTCCTCTGCTAGACAGAATGGAGGTGATC-ACTCTCTCAGGGTACATTACTGATG 1795
Query 1763 AGAAAATGCATATTGCTAGAGACTATTTGGTGAAAAA-GACATGCAGAGATTGTGGCATT 1821
||||||||||||| |||||||||||||||| ||||| | || |||||||||||||||||
Sbjct 1796 AGAAAATGCATATCGCTAGAGACTATTTGGAGAAAACCG-CACGCAGAGATTGTGGCATT 1854
Query 1822 AAGCCTGAACAGGTTGATTTGAGTGATGCAGCTCTTCTTTCCTTGATAGAAAATTACTGC 1881
|||||||||||||||||| |||| ||||||||| ||||||||||||||||| ||||||||
Sbjct 1855 AAGCCTGAACAGGTTGATGTGAGCGATGCAGCTTTTCTTTCCTTGATAGAACATTACTGC 1914
Query 1882 AGAGAAGCAGGAGTTAGAAATCTCCAAAAGCAGATTGAGAAGATTTACCGTAAGGTTGCT 1941
|||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||
Sbjct 1915 AGAGAAGCAGGAGTTAGAAATCTCCAGAAGCAGATTGAGAAGATTTTTCGTAAGATTGCT 1974
Query 1942 CTTGAACTAGTACGCCAAG-G--AGC-A--GTT-T-C-T----TTT-T-ATG-T-T-ACT 1983
||| |||| || ||| ||| | | | | | | | | ||| | ||| | | |||
Sbjct 1975 CTTAAACTTGTTCGCAAAGCGGCATCCACCGAAGTGCCTAGAATTTCTGATGATGTTACT 2034
Query 1984 ---GACACTAAAGATACTAAATCTTCGGCCAAGACCGATTCGGAGGT-TA-AGGGAA-T- 2036
|||||| |||| |||||||||| ||||||||| |||| ||| | | || || |
Sbjct 2035 ACTGACACTGAAGAAACTAAATCTTTGGCCAAGACTGATTTGGAA-TCTCCAGAGACCTC 2093
Query 2037 -G-A-AAGTGGCTGATATTATGAAGATACTTGAATCAGCAACTGGGGATTCAACAGAATC 2093
| | ||| | | | | || || | ||| | |||||||||||| ||||||||||
Sbjct 2094 TGCAGAAG-GA-TCC-ACTGTGTTGACAGATGAGTTGGCAACTGGGGATCCAACAGAATC 2150
Query 2094 AAAGACTAAGCAGAGCGGAGTGGTAGCTAAAACGTTTAAAAAGGT-TATGATTGATGAAT 2152
|| |||| |||||||||||| ||||||| ||||| || ||||| | ||||||||||||||
Sbjct 2151 AACGACTGAGCAGAGCGGAGAGGTAGCTGAAACGGTTGAAAAG-TATATGATTGATGAAT 2209
Query 2153 CAAACCTTGCAGATTATGTAGGCAAACCAGTATTCCAGGAAGAGAAGATCTATGAACAGA 2212
|||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct 2210 CAAACCTTTCAGATTATGTAGGCAAGCCAGTATTCCAGGAAGAGAAGATATATGAGCAGA 2269
Query 2213 CACCTGTTGGGGTTGTGATGGGTCTAGCTTGGACATCCATGGGTGGCTCAACGTTGTACA 2272
|||| || |||||||| |||||||||||||||||||||||||| |||||||| |||||||
Sbjct 2270 CACCAGTCGGGGTTGTAATGGGTCTAGCTTGGACATCCATGGGGGGCTCAACATTGTACA 2329
Query 2273 TAGAGACAACCTTTGTAGAAGAAGGAGAGGGAAAAGGTGGTCTTCATATAACGGGTCAGC 2332
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||
Sbjct 2330 TAGAGACAACCTTTGTAGAAGAAGGAGAAGGCAAAGGTGGTCTTCATATAACGGGTCGGC 2389
Query 2333 TTGGGGATGTGATGAAAGAAAGCGCAGAGATCGCTCACACAGTCGCTAGAAGAATAATGT 2392
||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 2390 TTGGGGATGTGATGAAAGAAAGCGCAGAGATAGCTCACACAGTCGCGAGAAGAATAATGC 2449
Query 2393 TTGAGAAAGAACCAGAGAACCTCTTTTTTGCGAATTCCAAGCTTCATTTACATGTTCCTG 2452
| ||||||||||| |||||| || ||||||||||||||||||||| ||||||| ||||
Sbjct 2450 TGGAGAAAGAACCCGAGAACAAGTTGTTTGCGAATTCCAAGCTTCATCTACATGTACCTG 2509
Query 2453 AAGGAGCCACACCAAAAGACGGTCCAAGTGCAGGCTGCACCATGATCACTTCGTTCCTAT 2512
||||||||||||||||||||| ||||| ||||||||||||||||| ||||| || ||||
Sbjct 2510 CAGGAGCCACACCAAAAGACGGCCCAAGCGCAGGCTGCACCATGATAACTTCATTGCTAT 2569
Query 2513 CACTTGCCATGAAGAAGCTTGTAAGGAAGGATCTTGCAATGACCGGAGAAGTCACTCTAA 2572
|||||||| ||||||||| |||||||||||||||||||||||| |||||||||||| | |
Sbjct 2570 CACTTGCCTTGAAGAAGCCTGTAAGGAAGGATCTTGCAATGACTGGAGAAGTCACTTTGA 2629
Query 2573 CTGGTAGAATTCTTCCAATTGGTGGCGTTAAGGAGAAGACTATAGCTGCAAAACGGAGTC 2632
| |||||||| ||| | ||||| ||||| || ||||||||||||||||||| ||||||||
Sbjct 2630 CCGGTAGAATCCTTGCGATTGGCGGCGTGAAAGAGAAGACTATAGCTGCAAGACGGAGTC 2689
Query 2633 A-GATCAAAACAATAATATTCCCGGAGGCAAATCGGAGAGACTTTGAGGAGCTTGCG-GA 2690
| | | || ||||||||||| ||||| || |||||||| ||||| ||||| ||| ||
Sbjct 2690 AAG-TGAAGGTGATAATATTCCCTGAGGCTAACCGGAGAGATTTTGATGAGCTGGCGAGA 2748
Query 2691 AAACATGAAAGAAGGGCTTGATGTTCACTTCGTGGATGAATATGAGAAGATATTCGATCT 2750
|| | ||||||||||||| || ||||| |||||||||||||||||| |||| ||||| ||
Sbjct 2749 AA-CGTGAAAGAAGGGCTCGAAGTTCATTTCGTGGATGAATATGAGCAGATTTTCGAGCT 2807
Query 2751 AGCATTCAATTATGACCATTAG 2772
||| || ||||||||||||
Sbjct 2808 AGCCTTTGGCTATGACCATTAG 2829
Score = 298 bits (161), Expect = 2e-79
Identities = 221/250 (88%), Gaps = 4/250 (2%)
Strand=Plus/Plus
Query 297 TGTCTCAACTAACCCTAC-CCTCGACGATTGTCTAACGGTTATAGCATTGCCATTGCCTC 355
||||||| |||| ||| | ||| ||||||||||||||||||||||||||||||||||| |
Sbjct 198 TGTCTCAGCTAAACCT-CACCTGGACGATTGTCTAACGGTTATAGCATTGCCATTGCCCC 256
Query 356 ACAAGCCTCTTATTCCTGGCTTTTACATGCCAATCTATGTCAAGGATCCTAAAGTTCTTG 415
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 257 ACAAGCCTCTTATTCCTGGCTTTTACATGCCAATATATGTCAAGGATCCTAAAGTTCTTG 316
Query 416 CAGCTTTACAAGAGAGCACAAGACAACAATCTCCATATGTTGGGGCTTTCCTTTTGAAGG 475
|||||||||||||||| | |||||||||| ||||||||| |||||||||||||||||||
Sbjct 317 CAGCTTTACAAGAGAGTAGAAGACAACAAGCTCCATATGCAGGGGCTTTCCTTTTGAAGG 376
Query 476 ATGGCGCTTC-TACTGATTCATCTTCTTGCTCTGAAACAAATAATGTTGTCCACAAGTTT 534
||| ||| || | |||| |||||||| |||||||||| | ||| || | | |||||
Sbjct 377 ATGACGCGTCAT-CTGACTCATCTTCGAGCTCTGAAACTGAGAATATTCTAGAGAAGTTG 435
Query 535 aaaggcaaag 544
||||| ||||
Sbjct 436 AAAGGAAAAG 445
Score = 296 bits (160), Expect = 7e-79
Identities = 232/266 (87%), Gaps = 8/266 (3%)
Strand=Plus/Plus
Query 566 gaaaagaGTTGCTTAACCGTATTTACCAAGTGGGCACTCTTGCTCAGATTTCAAGTATCC 625
||||||||||| ||||||| ||| | |||| ||||| ||||| ||||||||||||||||
Sbjct 440 GAAAAGAGTTGATTAACCGGATTCATGAAGTTGGCACACTTGCCCAGATTTCAAGTATCC 499
Query 626 AAGGTGAGCAAGTCATCCTTGTTGGTCGCAGACGACTTCGAATAA-A-AGA-GATG-GT- 680
|||||||||||||||||||| |||||| ||||| ||||||||||| | ||| | || ||
Sbjct 500 AAGGTGAGCAAGTCATCCTTATTGGTCACAGACAACTTCGAATAACAGAGATGGTGAGTG 559
Query 681 -GAGTGAAGATCCTCTAACCGTCAACGTTTACCATTTAAAGGATAAGCCATATGACAAGG 739
|||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||||||
Sbjct 560 AGAGTGAAGATCCCCTAACCGTCAAAGTTGACCATCTAAAGGATAAGCCATATGACAAGG 619
Query 740 ACAATGCTGTCATCAAGGCAAGC-TACGTTGAAGTTATCTCGATGCTTAGGGATGTCTTA 798
|| ||| |||||||||||||| | ||| || |||| || |||| |||||||||||||||
Sbjct 620 ACGATGATGTCATCAAGGCAA-CATACTTTCAAGTGATGTCGACACTTAGGGATGTCTTA 678
Query 799 AAGATAAATTCACTCTGGAGAGATCA 824
|||| || ||||||||||||||||||
Sbjct 679 AAGACAACTTCACTCTGGAGAGATCA 704
Score = 224 bits (121), Expect = 3e-57
Identities = 153/168 (91%), Gaps = 4/168 (2%)
Strand=Plus/Plus
Query 827 ATATAGGTGACTTCAGTTAT-CAACATTTAGCTGATTTTGGAGCCGGGATCTCTGGCGCT 885
|||||||||| |||| |||| ||| | ||||| ||||||||||| |||||||||||||||
Sbjct 758 ATATAGGTGAATTCAATTATCCAA-AGTTAGCCGATTTTGGAGCTGGGATCTCTGGCGCT 816
Query 886 AACAAACATCAAAATCAGGGGGTTCTT-ATAGAACTGGATGTTCATAAACGTCTGGAGTT 944
||||||||||||||||||||||||||| | ||||||||||||||| |||||||| |||||
Sbjct 817 AACAAACATCAAAATCAGGGGGTTCTTGA-AGAACTGGATGTTCACAAACGTCTAGAGTT 875
Query 945 GACGTTGGAATTGGTGAAAAAACAAGTAGAAATTAACAAGATTAAAGA 992
|||| ||||||||||||||||| |||| ||||||||||||||| ||||
Sbjct 876 GACGCTGGAATTGGTGAAAAAAGAAGTTGAAATTAACAAGATTCAAGA 923
> AT5G26860.1 | Symbols: LON_ARA_ARA, LON1 | lon protease 1 | chr5:9451048-9457000
FORWARD LENGTH=3327
Length=3327
Score = 941 bits (509), Expect = 0.0
Identities = 839/995 (84%), Gaps = 36/995 (4%)
Strand=Plus/Plus
Query 991 GAGACAGACGACGGATCTTCACTTTCTGCAAAG-ATAAGGGTAAGGATTGATACTAA-TA 1048
|||||||| ||| |||| |||||||||||||| ||| || ||||||||| |||| |
Sbjct 1180 GAGACAGATGACAAATCTGCACTTTCTGCAAAGTTTAA-GGAAAGGATTGAGCCTAACAA 1238
Query 1049 GAGAAAACATTCCAAAACATGTATTAAAAGTCATGGAAGAAGAGTTTACAAAGCTGGAGA 1108
| ||||| |||||| ||||||||| ||||||| ||||||||| ||||||||||| ||
Sbjct 1239 G-GAAAAAATTCCAGCGCATGTATTACAAGTCATAGAAGAAGAGCTTACAAAGCTGCAGC 1297
Query 1109 TGTTAGAAGAC-AATT-ATAGCGACTTCGATTTGAC-CTATAACTACCTTGATTGGTTGA 1165
|||||| || | | || | ||||| || | |||| | ||||||||||||||||||||
Sbjct 1298 TGTTAG-AGGCGAGTTCA-AGCGAGTTTAACGTGACGC-GTAACTACCTTGATTGGTTGA 1354
Query 1166 CCGTGCTGCCTTGGGGAAATTTCAGTTATGAGAATTTTGATG-TCCTACGGGC-AAAAAA 1223
|| | ||||||||||||||| |||| |||| || ||||||| | | |||||| ||| |
Sbjct 1355 CCATATTGCCTTGGGGAAATTACAGTAATGAAAACTTTGATGTTGC-ACGGGCGCAAACA 1413
Query 1224 GATTCTTGACGAGGATCATTACGGATTATCTGATGTAAAAGAAAGAATATTAGAGTTTAT 1283
||||||||||||||||| || || |||||||| ||||| ||||||||| | || |||||
Sbjct 1414 -ATTCTTGACGAGGATCACTATGGCTTATCTGACGTAAAGGAAAGAATACTGGAATTTAT 1472
Query 1284 TGCTGTGGGAAGACTTAGAGGCACTTCACAAGGGAAAATCATTTGTCTATCTGGCCCACC 1343
||| |||||||||||||||||||||||||||||||||||||| || || || ||||| ||
Sbjct 1473 TGCAGTGGGAAGACTTAGAGGCACTTCACAAGGGAAAATCATCTGCCTCTCCGGCCCTCC 1532
Query 1344 TGGAGTAGGTAAAACTAGCATTGGGCGTTCAATTGCACGTGCTCTTGACCGCAAGTTCTT 1403
||||||||| |||||||| |||||||| || ||||||||||||||| | ||||| || ||
Sbjct 1533 TGGAGTAGGCAAAACTAGTATTGGGCGGTCTATTGCACGTGCTCTTAATCGCAAATTTTT 1592
Query 1404 CCGGTTCGCTGTTGGAGGACTATCTGATGTTGGC-GAGATTAAGGGGCATTGTCAAACAT 1462
||||||| |||||||||| || | ||||| | | ||||| ||||||||| ||| ||||
Sbjct 1593 CCGGTTCTCTGTTGGAGGGTTAGCAGATGTCG-CTGAGATCAAGGGGCATCGTCGGACAT 1651
Query 1463 ATGTTGGTGCCATGCCTGGAAAGATGGTGCAATGTCTAAAGAGTGTGGGAACAGAAAATC 1522
||||||| |||||||| |||||||||||||||||||||||||||||||| |||| |||||
Sbjct 1652 ATGTTGGCGCCATGCCAGGAAAGATGGTGCAATGTCTAAAGAGTGTGGGGACAGCAAATC 1711
Query 1523 CTCTTATTCTGATCGATGAGATTGATAAGCTTGATAG-GTGCCACACTGGCGACCCAGCC 1581
||||| |||| |||||||||||||||||||| | || | |||| |||| ||||| |||
Sbjct 1712 CTCTTGTTCTAATCGATGAGATTGATAAGCTGGGGAGAG-GCCATGCTGGTGACCCGGCC 1770
Query 1582 AGTGCGTTGTTGGAGGTTATGGATCCAGAGCAGAATGCAAATTTTCTAGACCACTTTCTC 1641
||||| ||||||||| || ||||||||||||| || ||||||||||| ||||||| ||||
Sbjct 1771 AGTGCTTTGTTGGAGCTTCTGGATCCAGAGCAAAACGCAAATTTTCTGGACCACTATCTC 1830
Query 1642 AATGTTACTATTGA-CTTATCAAAGGTTTTATTTGTATGCACTGCAAATGTGATAGAAAT 1700
| |||||||| || || |||||||||||||||||| ||||| |||||||||||||| ||
Sbjct 1831 GACGTTACTATAGATCT-ATCAAAGGTTTTATTTGTGTGCACAGCAAATGTGATAGACAT 1889
Query 1701 GATTCCGGGTCCTCTGCTAGACAGAATGGAGGTGATTGATCTCT--CTGGGTATGTTACT 1758
|||||| |||| ||||||||||||||||||||||| ||| | |||||||| | |||
Sbjct 1890 GATTCCAAATCCTTTGCTAGACAGAATGGAGGTGATT--TCTATTGCTGGGTATATCACT 1947
Query 1759 GATGAGAAAA-TGCATATTGCTAGAGACTATTTGGTGAAAAAGACATGCA-G---AGATT 1813
||||| |||| | ||||| || ||||||||||||| ||||| || |||| | |||||
Sbjct 1948 GATGA-AAAAGTTCATATCGCAAGAGACTATTTGG--AAAAA-AC-TGCACGTGGAGATT 2002
Query 1814 GTGGCATTAAGCCTGAACAGGTTGATTTGAGTGATGCAGCTCTTCTTTCCTTGATAGAAA 1873
|||| | ||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct 2003 GTGGTGTCAAGCCTGAACAGGTTGAGGTGAGTGATGCAGCGCTTCTTTCCTTGATAGAAA 2062
Query 1874 ATTACTGCAGAGAAGCAGGAGTTAGAAATCTCCA-AAAGCAGATTGAGAAGATTTACCGT 1932
||||||||||||||||||| ||||| |||||||| ||| ||||| |||||||||||||||
Sbjct 2063 ATTACTGCAGAGAAGCAGGTGTTAGGAATCTCCAGAAA-CAGATCGAGAAGATTTACCGT 2121
Query 1933 AAGGTTGCTCTTGAACTAGTACGCCAAGGAGCAGT 1967
||| |||| ||| || |||| || ||||||||||
Sbjct 2122 AAGATTGCACTTAAATTAGTGCGTGAAGGAGCAGT 2156
Score = 651 bits (352), Expect = 0.0
Identities = 531/619 (86%), Gaps = 6/619 (1%)
Strand=Plus/Plus
Query 2132 AAAAGGTTATGATTGATGAATCAAACCTTGCAGATTATGTAGGCAAACCAGTATTCCAGG 2191
||| ||||||||||||||| ||||||||||| ||||||||||| ||||| |||||||| |
Sbjct 2309 AAACGGTTATGATTGATGAGTCAAACCTTGCGGATTATGTAGGAAAACCGGTATTCCATG 2368
Query 2192 AAGAGAAGATCTATGAACAGACACCTGTTGGGGTTGTGATGGGTCTAGCTTGGACATCCA 2251
||||||| ||||||| |||||||| || || |||||||||||||||||||||||||| |
Sbjct 2369 CAGAGAAGCTCTATGAGCAGACACCGGTAGGTGTTGTGATGGGTCTAGCTTGGACATCAA 2428
Query 2252 TGGGTGGCTCAACGTTGTACATAGAGACAACCT-TTGTAGAAGAAGGAGAGGGAAAAGGT 2310
||||||| ||||| |||||||||||||| | || |||| || ||||| || || ||||||
Sbjct 2429 TGGGTGGTTCAACATTGTACATAGAGACGA-CTGTTGTGGAGGAAGGGGAAGGTAAAGGT 2487
Query 2311 GGTCTTCATATAACGGGTCAGCTTGGGGATGTGATGAAAGAAAGCGCAGAGATCGCTCAC 2370
|| || |||||||||||||||| || ||||||||||||||||| ||| | || ||||||
Sbjct 2488 GGCCTGAATATAACGGGTCAGCTCGGTGATGTGATGAAAGAAAGTGCACAAATTGCTCAC 2547
Query 2371 ACAGTCGCTAG-AAGAATAATGTTTGAGAAAGAACCAGAGAACCTCTTTTTTGCGAATTC 2429
|||||||| || ||| || ||| | ||||||||||||||||| | || ||||| || ||
Sbjct 2548 ACAGTCGCCAGAAAG-ATCATGCTAGAGAAAGAACCAGAGAATCAGTTCTTTGCAAACTC 2606
Query 2430 CAAGCTTCATTTACATGTTCCTGAAGGAGCCACACCAAAAGACGGTCCAAGTGCAGGCTG 2489
|||||||||| | |||||||||| ||||||||| || || || |||||||||||||||||
Sbjct 2607 CAAGCTTCATCTCCATGTTCCTGCAGGAGCCACTCCCAAGGATGGTCCAAGTGCAGGCTG 2666
Query 2490 CACCATGATCACTTCGTTCCTATCACTTGCCATGAAGAAGCTTGTAAGGAAGGATCTTGC 2549
|||||||||||| || || ||||||||||||| |||||| | || |||||||| |||||
Sbjct 2667 CACCATGATCACATCTTTACTATCACTTGCCACGAAGAAACCCGTTAGGAAGGACCTTGC 2726
Query 2550 AATGACCGGAGAAGTCACTCTAACTGGTAGAATTCTTCCAATTGGTGGCGTTAAGGAGAA 2609
|||||| ||||||||||| ||||| || ||||||||||| |||||||| || || |||||
Sbjct 2727 AATGACTGGAGAAGTCACACTAACCGGAAGAATTCTTCCTATTGGTGGGGTGAAAGAGAA 2786
Query 2610 GACTATAGCTGCAAAACGGAGTCAGATCAAAACAATAATATTCCCGGAGGCAAATCGGAG 2669
|||||||| || | ||||||||||| |||||||||||||| || |||||||| |||||
Sbjct 2787 AACTATAGCGGCGAGGCGGAGTCAGATTAAAACAATAATATTTCCAGAGGCAAACCGGAG 2846
Query 2670 AGACTTTGAGGAGCTTGCGGAAAACATGAAAGAAGGGCTTGATGTTCACTTCGTGGATGA 2729
||||||||| ||||| || || || |||||||||||||| |||||||||||||||||||
Sbjct 2847 AGACTTTGATGAGCTGGCAGAGAATGTGAAAGAAGGGCTTAATGTTCACTTCGTGGATGA 2906
Query 2730 ATATGAGAA-GATATTCGA 2747
|||| ||| ||| |||||
Sbjct 2907 CTATG-GAAAGATCTTCGA 2924
Score = 211 bits (114), Expect = 3e-53
Identities = 187/222 (84%), Gaps = 6/222 (3%)
Strand=Plus/Plus
Query 282 ATCTTCTTCACCGATTGT-CTCAACTAACCCTA-CCCTCGACGATTGTCTAACGGTTATA 339
|||||| || ||||||| | | |||||||||| ||| || |||||| |||||||| ||
Sbjct 381 ATCTTCGTCTGCGATTGTGC-CCACTAACCCTAGGCCT-GAAGATTGTTTAACGGTTCTA 438
Query 340 GCATTGCCATTGCCTCACAAGCCTCTTATTCCTGGCTTTTACATGCCAATCTATGTCAAG 399
|||||||| |||| || | ||| ||| ||||||| ||||||||||||||||||||||||
Sbjct 439 GCATTGCCGGTGCCACATAGGCCGCTTTTTCCTGGTTTTTACATGCCAATCTATGTCAAG 498
Query 400 GATCCTAAAGTTCTTGCAGCTTTACAAGAGAGCACAAGACAACAATCTCCATATGTTGGG 459
||||||||||| || ||||| ||||||||||||| ||||| |||| ||||||||| ||
Sbjct 499 GATCCTAAAGTACTCGCAGCCTTACAAGAGAGCAGAAGACGACAAGCTCCATATGCAGGA 558
Query 460 GCTTTCCTTTTGAAGGATGGCGCTTCTA-CTGATTCATCTTC 500
||||||||| ||||||||| | | || | |||||||||||||
Sbjct 559 GCTTTCCTTCTGAAGGATGACCCATC-AGCTGATTCATCTTC 599
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 137708258535
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5