BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg903543
Length=2076
Score E
Sequences producing significant alignments: (Bits) Value
AT3G06630.1 | Symbols: | protein kinase family protein | chr3:... 1698 0.0
AT3G06620.1 | Symbols: | PAS domain-containing protein tyrosin... 1548 0.0
AT3G06640.1 | Symbols: | PAS domain-containing protein tyrosin... 1511 0.0
AT1G67890.1 | Symbols: | PAS domain-containing protein tyrosin... 935 0.0
AT5G49470.2 | Symbols: | PAS domain-containing protein tyrosin... 510 2e-143
AT1G18230.1 | Symbols: | pseudogene, putative protein kinase |... 76.8 8e-13
> AT3G06630.1 | Symbols: | protein kinase family protein | chr3:2070388-2073800
REVERSE LENGTH=2025
Length=2025
Score = 1698 bits (919), Expect = 0.0
Identities = 1138/1239 (92%), Gaps = 34/1239 (3%)
Strand=Plus/Plus
Query 704 CTGACCACATGGACGATGCAGCATCAAGTGGTGCCAGCACATCTAGAGAGGATTTTATCC 763
||||||||| |||||| ||||| ||||||||||| |||||| | |||| |||||||||||
Sbjct 800 CTGACCACAGGGACGACGCAGCGTCAAGTGGTGCTAGCACACCAAGAGGGGATTTTATCC 859
Query 764 AGTCTCCTTTTGGTATATTCACATGTAACGATGACAAGTTTCCTTCAAAACCCTTCAAAG 823
| |||||||||||| | ||||||||| ||||||||||||||||||||||||||| |||||
Sbjct 860 AATCTCCTTTTGGTGTTTTCACATGTTACGATGACAAGTTTCCTTCAAAACCCTCCAAAG 919
Query 824 ATTCCAGTAATGAGAGTGATAGAAAGCCTGCAATCCAGAAGGTTCCCACCTCAAAAGCTG 883
||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 920 ATTCC---------AGTGATAGAAAGCCTGCAATCCATAAGGTTCCCACCTCAAAAGCTG 970
Query 884 AAGAATGGATGGTAAAGAAAGATTTGTCACGGCCATGGAAAGGGAATGAACAGGAAGGTT 943
||||||||||||||||||||| ||||||||| ||||||||||||||||| || |||||||
Sbjct 971 AAGAATGGATGGTAAAGAAAGGTTTGTCACGTCCATGGAAAGGGAATGAGCAAGAAGGTT 1030
Query 944 CAGGAGTAAAGCCTACTCATTCTCTATGGCCTTGTGTACAGAATGAACAAAAGAAAGGTA 1003
|| |||||| ||||||||||||| ||||| |||| ||| | ||||||||| |||||| ||
Sbjct 1031 CAAGAGTAAGGCCTACTCATTCTGTATGGTCTTGGGTAGAAAATGAACAAGAGAAAGATA 1090
Query 1004 AGT-CTCACCAGATCAATCCATCTTCTGGTATTAAGTCTGAAAGCCATGACTCTGAAAGT 1062
||| | |||||||| |||| ||| ||||| |||||||||||||||||| ||||||||||
Sbjct 1091 AGTAC-CACCAGATTTATCCCTCTGCTGGTGTTAAGTCTGAAAGCCATGGCTCTGAAAGT 1149
Query 1063 AATAAGCCTACTGATGATGACGAAGCTTCTAGTATGTGGTCTTCCTCTATAAATGCGAAC 1122
||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 1150 AATAAGCCTAC---TGATGACGAAGCTTCTAATATGTGGTCTTCCTCTATAAATGCAAAC 1206
Query 1123 GGCAC--A-A--GC----A---GCGGAAGTACCAGTAGGAGTGTTATGGACAAGATTGCT 1170
|||| | | || | |||| ||||||||||||||||||||||||||| ||| |
Sbjct 1207 AGCACAAACAGCGCTAGTAGTTGCGGCAGTACCAGTAGGAGTGTTATGGACAAGGTTGAT 1266
Query 1171 AAAGGTAGCTATCACTTGGAATATGAAATTTTATGGGATCATTTGACAATCGCGGAACAA 1230
| || |||| ||| ||||||| ||||||||||||||||| |||||||||||| |||||||
Sbjct 1267 ATAGATAGCGATCCCTTGGAACATGAAATTTTATGGGATGATTTGACAATCGGGGAACAA 1326
Query 1231 ATTGGACAAGGTTCATGTGGAACTGTCTATCACGGTCTCTGGTTTGGATCTGATGTAGCT 1290
||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1327 ATTGGACGAGGTTCATGTGGAACTGTCTATCACGGTATCTGGTTTGGATCTGATGTAGCT 1386
Query 1291 GTGAAAGTGTTCTCCAAACAAGAATATTCAGAAGCGA-TCATAAAATCTTTT-AAACAAG 1348
||||||||||||||||||||||||||||||||| | | ||||||| |||||| ||| |||
Sbjct 1387 GTGAAAGTGTTCTCCAAACAAGAATATTCAGAATC-AGTCATAAAGTCTTTTGAAA-AAG 1444
Query 1349 AGGTATCGCTGATGAAAAGAC-TCAGGCATCCTAACGTCCTGCTGTTTATGGGAGCTGTG 1407
||||||||||||||||||||| || | ||||||||||| |||||||||||||||||||||
Sbjct 1445 AGGTATCGCTGATGAAAAGACTTC-GACATCCTAACGTTCTGCTGTTTATGGGAGCTGTG 1503
Query 1408 ACTTCACCCCAGCATCTCTGTATAGTGTCAGAGTTCGTTCCACGTGGAAGTCTCTTCCGT 1467
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1504 ACTTCACCCCAGCGTCTCTGTATAGTGTCAGAGTTCGTTCCACGTGGAAGTCTCTTCCGT 1563
Query 1468 CTACTGCAGAGAAGTATGTCAAAACTTGATTGGAGGAGGCGTATCAATATGGCCGTGGAC 1527
|||||||||||||||||||| ||||||||||||||| | |||||||| |||||| |||||
Sbjct 1564 CTACTGCAGAGAAGTATGTCGAAACTTGATTGGAGGCGACGTATCAACATGGCCTTGGAC 1623
Query 1528 ATTGCTCGCGGTATGAATTATCTTCACTGTTGTAGTTCACCCATCATCCATCGTGATCTG 1587
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 1624 ATTGCTCGCGGTATGAATTATCTTCACTGTTGTAGTCCACCCATCATCCACCGTGATCTG 1683
Query 1588 AAGTCGTCAAATCTT-CTGGTAGACAGGAACTGGACCGTTAAGGTAGCTGACTTTGGTCT 1646
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1684 AAGTCGTCAAAT-TTGCTGGTAGACAGGAACTGGACCGTTAAGGTAGCTGACTTTGGTCT 1742
Query 1647 TTCGCGTATCAAGCATCAGACATACCTAACCAGCAAGTCGGGAAAGGGAACGCCTCAATG 1706
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1743 TTCGCGTATTAAGCATCAGACATACCTAACTAGCAAGTCGGGAAAGGGAACGCCTCAATG 1802
Query 1707 GATGGCACCAGAAGTTCTTCGAAATGAGTCTGCTGATGAGAAGTCTGACATTTACAGCTT 1766
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1803 GATGGCACCTGAAGTTCTTCGAAATGAGTCTGCTGATGAGAAGTCTGACATTTATAGCTT 1862
Query 1767 TGGAGTAGTACTATGGGAGCTTGCCACAGAGAAGATCCCTTGGGAAAATCTCAACTCGAT 1826
|||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1863 TGGAGTAGTATTATGGGAGCTTGCCACAGAGAAGATCCCATGGGAAAATCTCAACTCGAT 1922
Query 1827 GCAGGTGATCGGAGCTGTGGGGTTCATGAACCAGAGGCTGGAAATTCCAAAGGACATTGA 1886
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1923 GCAGGTGATCGGAGCTGTGGGGTTCATGAACCAGAGGCTGGAAATTCCAAAGGACACTGA 1982
Query 1887 TCCTGATTGGATCTCATTAATAGAGAGCTGCTGGCACAG 1925
|||||||||||||||||||||||||||||| ||||||||
Sbjct 1983 TCCTGATTGGATCTCATTAATAGAGAGCTGTTGGCACAG 2021
Score = 874 bits (473), Expect = 0.0
Identities = 657/738 (89%), Gaps = 44/738 (6%)
Strand=Plus/Plus
Query 1 ATGGAGGAGGAGCTGCTGAAGAAGATGATAGAGCTAGAGCAAAGTCAGGAACTTCTAAAG 60
||||||||||||||||| ||||||||| | |||||||||||||||||||| |||||||||
Sbjct 10 ATGGAGGAGGAGCTGCTCAAGAAGATGCTTGAGCTAGAGCAAAGTCAGGAGCTTCTAAAG 69
Query 61 CAGGAGATGTCTAGGCTCAAGCTCTCCACGGAGCTTAGGCTG-C--CG-AT--GATGTTG 114
|||||||||||||||||||||||||||||||||||||||| | | || || | |||||
Sbjct 70 CAGGAGATGTCTAGGCTCAAGCTCTCCACGGAGCTTAGGCAGCCGTCGCATCCGGTGTTG 129
Query 115 CCGCGCCGGCCGTTGAGCCGTATCC----A--G--G-----G-AT-CA---CCCGGGAAG 156
||||| ||||||||||| ||||||| | | | | || || |||||||||
Sbjct 130 CCGCGTCGGCCGTTGAGACGTATCCAGGGATCGATGAATTCGAATCCATCGCCCGGGAAG 189
Query 157 TTCACTGATAAACAGTATTTGAATATTTTGCAGTCGTTGGCTCAATCTGTTCATGTCTTA 216
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 190 TTCACTGATAAACAGTATTTGAATATTTTGCAGTCGTTGGCTCAGTCTGTTCATGTCTTA 249
Query 217 GATCTCAATACACGAATTATCTTTTGGAATGCCATGTCGGAAAAGCTGTATGGGTACTCT 276
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 250 GATCTCAATACGCGAATTATCTTTTGGAATGCCATGTCGGAAAAGCTTTATGGGTACTCT 309
Query 277 GCTGCAGAAGTAGTTGGGAAGAACCCAGTTCATGTTATTGTAGATGATCAGAATGCTGCC 336
|||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct 310 GCTGCAGAAGTAGTTGGGCGGAACCCAGTACATGTTATTGTAGATGATCAGAATGCTGCC 369
Query 337 TTTGCCTTGAATGTTGCTCGACGTTGCGTCAATGGAGAGAGCTGGACTGGTGAGTTTCCT 396
|||||||||||||||||||||||||| | ||||||||| |||||||| || |||||||||
Sbjct 370 TTTGCCTTGAATGTTGCTCGACGTTGTGCCAATGGAGAAAGCTGGACAGGGGAGTTTCCT 429
Query 397 GTCAAGACCAAATCAGGGGTCATCTTTTCAGCTGTCACTACGTGTTCCCCCTTTTATGAT 456
||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 430 GTCAAGACCAAATCAGGAAAGATCTTTTCAGCTGTCACTACGTGTTCTCCCTTTTATGAT 489
Query 457 GATAACGGCACTATTCTTGGTATCATTTCTATCACAAGTGATATAGCACCCTATCTCAAC 516
|||||||||||| || ||||||||||||||||||||||||| || |||||||||||||||
Sbjct 490 GATAACGGCACTGTTGTTGGTATCATTTCTATCACAAGTGACATTGCACCCTATCTCAAC 549
Query 517 CCCAGACTCTCTTTGCCTAAATTGAAGCCGCAAGAACATGCA-AGGAA-CT--------- 565
|| |||||||||||||||| ||||||||||||||||| || | ||||| ||
Sbjct 550 CCGAGACTCTCTTTGCCTAGATTGAAGCCGCAAGAACCTG-AGAGGAAACTTGGTTTGGA 608
Query 566 CT--AAAGGAGCTGTT-TCATCGAAACTTGGCCTTC-ACTCTGATCAGCCTATACAAGTT 621
|| |||||||||||| | |||||||| |||||| | |||||||||||||||||||||||
Sbjct 609 CTCCAAAGGAGCTGTTAT-ATCGAAACCTGGCCT-CGACTCTGATCAGCCTATACAAGTT 666
Query 622 GCTATAGCATCAAAGATATCAAATTTGGCATCCAAGCTGGGCAACAA-GTTCAGGTCCAA 680
||||||||||||||||||||| ||||||||||||| || ||||||| || |||||| ||
Sbjct 667 TCTATAGCATCAAAGATATCAAGTTTGGCATCCAAGTTGAGCAACAAAGT-CAGGTCAAA 725
Query 681 AATGCGAGCAGGTGATAA 698
||||||||||||||||||
Sbjct 726 AATGCGAGCAGGTGATAA 743
> AT3G06620.1 | Symbols: | PAS domain-containing protein tyrosine
kinase family protein | chr3:2062206-2067416 REVERSE LENGTH=3227
Length=3227
Score = 1548 bits (838), Expect = 0.0
Identities = 1111/1240 (90%), Gaps = 29/1240 (2%)
Strand=Plus/Plus
Query 705 TGACCACATGGACGATGCAGCATCAAGTGGTGCCAGCACATCTAGAGAGGATTTTATCCA 764
|||||||| ||||||||||||||||||||||||||||||| | |||| ||||||||||||
Sbjct 1241 TGACCACAGGGACGATGCAGCATCAAGTGGTGCCAGCACACCAAGAGGGGATTTTATCCA 1300
Query 765 GTCTCCTTTTGGTATATTCACATGTAACGATGACAAGTTTCCTTCAAAACCCTTCAAAGA 824
||||||||||||| ||||||||||||| ||||| |||||| ||| ||||||||||||||
Sbjct 1301 GTCTCCTTTTGGTGTATTCACATGTAATGATGAGAAGTTTGTTTCGAAACCCTTCAAAGA 1360
Query 825 TTCCAGTAATGAGAGTGATAGAAAGCCTGCAATCCAGAAGGTTCCCACCTCAAAAGCTGA 884
||||||| ||||||||||| |||||||||||||||| ||||||| |||||||||||||||
Sbjct 1361 TTCCAGTGATGAGAGTGATGGAAAGCCTGCAATCCATAAGGTTCTCACCTCAAAAGCTGA 1420
Query 885 AGAATGGATGGTAAAGAAAGATTTGTCACGGCCATGGAAAGGGAATGAACAGGAAGGTTC 944
||| |||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||
Sbjct 1421 AGAGTGGATGGTAAAGAAAGGTTTGTCATGGCCATGGAAAGGGAATGAGCAGGAAGGTTC 1480
Query 945 AGGAGTAAAG-CCTACTCATTCTCTATGGCCTTGTGTACAGAATGAACAAAAGAAAG-GT 1002
| || ||| ||||| ||||| | |||||||| |||||||||||||||||||||| |
Sbjct 1481 AAAAG-GAAGACCTACAAATTCTGTTTGGCCTTGGGTACAGAATGAACAAAAGAAAGAG- 1538
Query 1003 AAGTCTCACCAGATCAATCCATCTTCTGGTATTAAGTCTGAAAGCCATGACTCTGAAAGT 1062
| || ||||||||| ||||| ||| ||||| || ||| ||||||||||| || |||||||
Sbjct 1539 AGGTGTCACCAGATTAATCCCTCTGCTGGTGTTCAGTATGAAAGCCATGCCTTTGAAAGT 1598
Query 1063 AATAAGCCTACT-GATGATGACGAAGCTTCTAGTATGTGGTCTTCCTCTATAAATGCGAA 1121
|||||||||| | || |||| | ||||||||| ||||||||||| |||||||||| ||
Sbjct 1599 AATAAGCCTA-TCAATAATGA-G--GCTTCTAGTTTGTGGTCTTCCCCTATAAATGCAAA 1654
Query 1122 C-G-----GCA---C-A--AGCAGCGGAAGTACCAGTAGGAGTGTTATGGACAAGATTGC 1169
| | ||| | | ||| ||||||||||||| || ||||||||| ||||| |||
Sbjct 1655 CAGTACAAGCAGCGCTAGTAGCTGCGGAAGTACCAGCAGCAGTGTTATGAACAAGGTTGA 1714
Query 1170 TAAAGGTAGCTATCACTTGGAATATGAAATTTTATGGGATCATTTGACAATCGCG-GAAC 1228
|| | |||| | ||||||||||||||||||||||||| |||||||||| | | ||||
Sbjct 1715 TACTGATAGCGAAGGCTTGGAATATGAAATTTTATGGGATGATTTGACAATTG-GAGAAC 1773
Query 1229 AAATTGGACAAGGTTCATGTGGAACTGTCTATCACGGTCTCTGGTTTGGATCTGATGTAG 1288
|| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1774 AAGTCGGACAAGGTTCATGTGGAACTGTTTATCACGGTCTCTGGTTTGGATCTGATGTAG 1833
Query 1289 CTGTGAAAGTGTTCTCCAAACAAGAATATTCAGAAGCGATCATAAAATCTTTTAAACAAG 1348
|||| |||||||||||||||||||||||||||| || | ||||| |||||||||||||||
Sbjct 1834 CTGTAAAAGTGTTCTCCAAACAAGAATATTCAGCAGAGGTCATAGAATCTTTTAAACAAG 1893
Query 1349 AGGTATCGCTGATGAAAAGACTCAGGCATCCTAACGTCCTGCTGTTTATGGGAGCTGTGA 1408
|||||| | ||||||||||||| || || |||||||||||||||||||||||||||||||
Sbjct 1894 AGGTATTGTTGATGAAAAGACTTAGACACCCTAACGTCCTGCTGTTTATGGGAGCTGTGA 1953
Query 1409 CTTCACCCCAGCATCTCTGTATAGTGTCAGAGTTCGTTCCACGTGGAAGTCTCTTCCGTC 1468
|||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1954 CTTCACCCCAGCGTCTCTGTATAGTGTCAGAGTTCCTTCCACGTGGAAGTCTCTTCCGTC 2013
Query 1469 TACTGCAG-AGAAGTATGTCAAAACTTGATTGGAGGAGGCGTATCAATATGGCCGTGGAC 1527
|||| ||| || || | ||||||||| ||||||||| |||||||| |||||||| |||||
Sbjct 2014 TACTACAGAAG-AGCACGTCAAAACTGGATTGGAGGCGGCGTATCCATATGGCCTTGGAC 2072
Query 1528 ATTGCTCGCGGTATGAATTATCTTCACTGTTGTAGTTCACCCATCATCCATCGTGATCTG 1587
||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||
Sbjct 2073 ATTGCTCGCGGTATGAATTATCTTCACCATTGTAGTCCACCCATTATCCATCGTGATCTG 2132
Query 1588 AAGTCGTCAAATCTTCTGGTAGACAGGAACTGGACCGTTAAGGTAGCTGACTTTGGTCTT 1647
||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2133 AAGTCATCAAATCTGCTGGTAGACAAGAACTGGACCGTTAAGGTAGCTGACTTTGGTCTC 2192
Query 1648 TCGCGTATCAAGCATCAGACATACCTAACCAGCAAGTC-GGGAAAGGGAACGCCTCAATG 1706
||||||||||||||| | |||||||||||||||||||| ||| |||||||||||||||||
Sbjct 2193 TCGCGTATCAAGCATGAAACATACCTAACCAGCAAGTCTGGG-AAGGGAACGCCTCAATG 2251
Query 1707 GATGGCACCAGAAGTTCTTCGAAATGAGTCTGCTGATGAGAAGTCTGACATTTACAGCTT 1766
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2252 GATGGCACCAGAAGTTCTTCGAAATGAGTCTGCTGATGAGAAATCTGACATTTACAGCTT 2311
Query 1767 TGGAGTAGTACTATGGGAGCTTGCCACAGAGAAGATCCCTTGGGAAAATCTCAACTCGAT 1826
|||||||||| |||||||||||||||| ||||||||||| ||||||| ||||||||| ||
Sbjct 2312 TGGAGTAGTATTATGGGAGCTTGCCACCGAGAAGATCCCATGGGAAACTCTCAACTCTAT 2371
Query 1827 GCAGGTGATCGGAGCTGTGGGGTTCATGAACCAGAGGCTGGAAATTCCAAAGGACATTGA 1886
||||||||| |||||||||||||||||| |||||||||||||||| ||||| ||||||||
Sbjct 2372 GCAGGTGATTGGAGCTGTGGGGTTCATGGACCAGAGGCTGGAAATCCCAAAAGACATTGA 2431
Query 1887 TCCT-GATTGGATCTCATTAATAGAGAGCTGCTGGCACAG 1925
|||| | ||||||||||||||| |||||||| ||||||||
Sbjct 2432 TCCTCG-TTGGATCTCATTAATGGAGAGCTGTTGGCACAG 2470
Score = 411 bits (222), Expect = 2e-113
Identities = 345/405 (85%), Gaps = 6/405 (1%)
Strand=Plus/Plus
Query 151 GGGAAGTTCACTGATAAACAGTATTTGAATATTTTGCAGTCGTTGGCTCAATCTGTTCAT 210
||||| |||||||||||||||||||||||||||||||||||| |||| ||| ||||||||
Sbjct 570 GGGAAATTCACTGATAAACAGTATTTGAATATTTTGCAGTCGATGGCACAAGCTGTTCAT 629
Query 211 GTCTTAGATCTCAATACACGAATTATCTTTTGGAATGCCATGTCGGAAAAGCTGTATGGG 270
| ||| ||||| |||| || ||||||||||||||||| ||| |||||||| | ||||||
Sbjct 630 GCCTTCGATCTTAATATGCGGATTATCTTTTGGAATGCTATGGCGGAAAAGGTTTATGGG 689
Query 271 TACTCTGCTGCAGAAGTAGTTGGGAAGAACCC-AGTTCATGTTATTGTAGATGATCAGAA 329
|||||||| ||||||| | ||||| ||||||| | || ||||||||| |||||||| | |
Sbjct 690 TACTCTGCAGCAGAAGCACTTGGGGAGAACCCTA-TTAATGTTATTGCAGATGATCGGGA 748
Query 330 TGCTGCCTTTGCCTTGAATGTTGCTCGACGTTGCGTCAATGGAGAGAGCTGGACTGGTGA 389
||||||||||| ||||| ||||||||||||| ||| |||||||||||||||||||||
Sbjct 749 CGCTGCCTTTGCAATGAATATTGCTCGACGTTGTGTCCGTGGAGAGAGCTGGACTGGTGA 808
Query 390 GTTTCCTGTCAAGACCAAATCAGGGG-TCATCTTTTCAGCTGTCACTACGTGTTCCCCCT 448
||||||||| |||| ||||||||||| | | ||||||||||||||||| |||||||| |
Sbjct 809 GTTTCCTGTTAAGAGCAAATCAGGGGAT-AGATTTTCAGCTGTCACTACCTGTTCCCC-T 866
Query 449 TT-TATGATGATAACGGCACTATTCTTGGTATCATTTCTATCACAAGTGATATAGCACCC 507
|| ||||||||| | || || || | || ||||||| |||||| ||| | | |||||
Sbjct 867 TTCTATGATGATGATGGTGCTCTTATGGGGATCATTTGTATCACCAGTAACACGGCACCG 926
Query 508 TATCTCAACCCCAGACTCTCTTTGCCTAAATTGAAGCCGCAAGAA 552
||||| ||||| ||| |||||||| ||||||||||| ||||||||
Sbjct 927 TATCTGAACCCAAGAATCTCTTTGGCTAAATTGAAGGCGCAAGAA 971
Score = 189 bits (102), Expect = 9e-47
Identities = 125/136 (92%), Gaps = 2/136 (1%)
Strand=Plus/Plus
Query 570 AGGAGCTGTT-TCATCGAAACTTGGCCTTCACTCTGATCAGCCTATACAAGTTGCTATAG 628
|||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1037 AGGAGCTGTTAT-ATCGAAACTTGGCCTTGACTCTGATCAGCCTATACAAGTTGCTATAG 1095
Query 629 CATCAAAGATATCAAATTTGGCATCCAAGCTGGGCAACAAGTTCAGGTCCAAAATGCGAG 688
|||||||||| ||| |||||||||||||| | |||||||| ||||||| ||||||||||
Sbjct 1096 CATCAAAGATCTCAGATTTGGCATCCAAGGTCAGCAACAAGGTCAGGTCGAAAATGCGAG 1155
Query 689 CAGGTGATAATAATGC 704
|||||||||||| |||
Sbjct 1156 CAGGTGATAATAGTGC 1171
Score = 150 bits (81), Expect = 4e-35
Identities = 93/99 (94%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 1973 GATACAAAGCTGAGACCCACATTCCAAGAACTGATGGAGAAACTAAGAGACCTGCAAAGA 2032
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct 2472 GATACAAAGCTGAGACCCACATTCCAAGAACTGATGGATAAATTAAGAGACCTGCAAAGA 2531
Query 2033 AAGTATACCATACAGTTCCAGGGGACTCGTGCTGCGTTA 2071
||||||| ||||||||||| | ||||||||||||||||
Sbjct 2532 AAGTATATGATACAGTTCCAAGCGACTCGTGCTGCGTTA 2570
> AT3G06640.1 | Symbols: | PAS domain-containing protein tyrosine
kinase family protein | chr3:2074189-2078317 REVERSE LENGTH=2374
Length=2374
Score = 1511 bits (818), Expect = 0.0
Identities = 1099/1231 (89%), Gaps = 33/1231 (3%)
Strand=Plus/Plus
Query 704 CTGACCACATGGACGATGCAGCATCAAGTGGTGCCAGCACATCTAGAGAGGATTTTATCC 763
||||||||||||| |||||||||||||||||||| |||||| | |||| ||| |||||||
Sbjct 842 CTGACCACATGGATGATGCAGCATCAAGTGGTGCTAGCACACCAAGAGGGGACTTTATCC 901
Query 764 AGTCTCCTTTTGGTATATTCACATGTAACGATGACAAGTTTCCTTCAAAACCCTTCAAAG 823
| |||||||||||| |||||||||||||||||||||||||| |||| ||||||||| ||
Sbjct 902 AATCTCCTTTTGGTGTATTCACATGTAACGATGACAAGTTTTCTTCCGAACCCTTCATAG 961
Query 824 ATTCCAGTAATGAGAGTGATAGAAAGCCTGCAATCCAGAAGGTTCCCACCTCAAAAGCTG 883
|||||||| ||| || | || ||| || | | || ||||||||||||||
Sbjct 962 ATTCCAGTGATG-GA-T-AT------CCT---AT--A-ACCCTTTTCACCTCAAAAGCTG 1006
Query 884 AAGAATGGATGGTAAAGAAAGATTTGTCACGGCCATGGAAAGGGAATGAACAGGAAGGTT 943
||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||
Sbjct 1007 AAGAATGGATGGTAAAGAAAGGTTTGTCTTGGCCATGGAAAGGGAATGAGCAGGAAGGTT 1066
Query 944 CAGGAGTAAAGCCTACTCATTCTCTATGGCCTTGTGTACAGAATGAACAAAAGAAAGGTA 1003
|| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||
Sbjct 1067 CAAGAGTAAAGCCTACTTATTCTGTATGGCCTTGTGTACAGAATGAACAAAAGAAAGATA 1126
Query 1004 AGTCTCACCAGATCAATCC-ATCTTCTGGTATTAAGTCTGAAAGCCATGACTCTGAAAGT 1062
|||||||||||||||| || | ||||||| |||||||| ||||||||| ||||||||||
Sbjct 1127 AGTCTCACCAGATCAA-CCGCTATTCTGGTGTTAAGTCTAAAAGCCATGCCTCTGAAAGT 1185
Query 1063 AATAAGCCTACTGATGATGACGAA-GCTTCTAGTATGTGGTCTTCCTCTATAAATGCGAA 1121
||||||||||| | || || || |||||| || || ||||||| | ||||||||||||
Sbjct 1186 AATAAGCCTAC-CA--ATAAC-AAGGCTTCTGGTTTGCGGTCTTCTTGTATAAATGCGAA 1241
Query 1122 C-G-GC-ACAAGCAGCGGAAGTACCAGT-AGGAGTGTTATGGACAAGATTGCTA-AAGGT 1176
| | || | ||| | |||| || |||| | ||| |||| ||||| | | || || |
Sbjct 1242 CAGCGCTATTAGCCGTGGAATTATCAGTCA-CAGTACTATGAACAAGGTGGATACAA-AT 1299
Query 1177 AGCT-ATCACTTGGAATATGAAATTTTATGGGATCATTTGACAATCGCG-GAACAAATTG 1234
|| | || |||||| ||||||||||| |||||| |||||||||||| | |||||||| |
Sbjct 1300 AG-TAATTGCTTGGAGTATGAAATTTTGTGGGATGATTTGACAATCG-GAGAACAAATCG 1357
Query 1235 GACAAGGTTCATGTGGAACTGTCTATCACGGTCTCTGGTTTGGATCTGATGTAGCTGTGA 1294
||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 1358 GACAAGGCTCATGTGGAACTGTCTATCACGGTCTTTGGTTTGGATCTGATGTAGCTGTAA 1417
Query 1295 AAGTGTTCTCCAAACAAGAATATTCAGAAGCGATCATAAAATCTTTTAAACAAGAGGTAT 1354
|| || |||||||||||||||||||||||| | ||||| ||||||||| |||||||||||
Sbjct 1418 AATTGATCTCCAAACAAGAATATTCAGAAGAGGTCATACAATCTTTTAGACAAGAGGTAT 1477
Query 1355 CGCTGATGAAAAGACTCAGGCATCCTAACGTCCTGCTGTTTATGGGAGCTGTGACTTCAC 1414
|| ||||| ||||||| || ||||||||||| ||||||||||||||||||||||||| ||
Sbjct 1478 CGTTGATGCAAAGACTTAGACATCCTAACGTTCTGCTGTTTATGGGAGCTGTGACTTTAC 1537
Query 1415 CCCAGCATCTCTGTATAGTGTCAGAGTTCGTTCCACGTGGAAGTCTCTTCCGTCTACTGC 1474
| ||| |||||||||||||||||||||| |||||||||||||||| || ||||||||||
Sbjct 1538 CTCAGGGTCTCTGTATAGTGTCAGAGTTCCTTCCACGTGGAAGTCTATTTCGTCTACTGC 1597
Query 1475 AGAGAAGTATGTCAAAACTTGATTGGAGGAGGCGTATCAATATGGCCGTGGACATTGCTC 1534
|||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 1598 AGAGAAATATGTCAAAACTTGATTGGAGGCGGCGTATCAATATGGCCTTGGACATTGCTC 1657
Query 1535 GCGGTATGAATTATCTTCACTGTTGTAGTTCACCCATCATCCATCGTGATCTGAAGTCGT 1594
|||| ||||||||||||||| | |||||| | |||||||||||||||||| ||||||| |
Sbjct 1658 GCGGCATGAATTATCTTCACCGCTGTAGTCCCCCCATCATCCATCGTGATTTGAAGTCAT 1717
Query 1595 CAAATCTTCTGGTAGACAGGAACTGGACCGTTAAGGTAGCTGACTTTGGTCTTTCGCGTA 1654
||||||| |||||||||| ||||| ||||||||||||||||||||||||||| |||||||
Sbjct 1718 CAAATCTGCTGGTAGACAAGAACTTGACCGTTAAGGTAGCTGACTTTGGTCTATCGCGTA 1777
Query 1655 TCAAGCATCAGACATACCTAACCAGCAAGTCGGGAAAGGGAACGCCTCAATGGATGGCAC 1714
| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1778 TTAAGCATCATACATACCTAACCAGCAAGTCGGGAAAGGGAATGCCTCAATGGATGGCAC 1837
Query 1715 CAGAAGTTCTTCGAAATGAGTCTGCTGATGAGAAGTCTGACATTTACAGCTTTGGAGTAG 1774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1838 CAGAAGTTCTTCGAAATGAGTCTGCTGATGAGAAGTCTGACATTTACAGCTTTGGAGTAG 1897
Query 1775 TACTATGGGAGCTTGCCACAGAGAAGATCCCTTGGGAAAATCTCAACTCGATGCAGGTGA 1834
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1898 TACTATGGGAGCTTGCCACAGAGAAGATCCCATGGGAAAATCTCAACTCGATGCAGGTGA 1957
Query 1835 TCGGAGCTGTGGGGTTCATGAACCAGAGGCTGGAAATTCCAAAGGACATTGATCCTGATT 1894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1958 TCGGAGCTGTGGGGTTCATGAACCAGAGGCTGGAAATTCCAAAGGACATTGATCCTGATT 2017
Query 1895 GGATCTCATTAATAGAGAGCTGCTGGCACAG 1925
|||||||| ||||||||||||| ||||||||
Sbjct 2018 GGATCTCACTAATAGAGAGCTGTTGGCACAG 2048
Score = 442 bits (239), Expect = 7e-123
Identities = 448/546 (82%), Gaps = 26/546 (5%)
Strand=Plus/Plus
Query 8 AGGAGCTGCTGAAGAAGATGATAGAGCTAGAGCAAAGTCAGGAACTTCTAAAGCAGGAGA 67
|||||||||||||||||||||||||||||||| |||||||||| | ||||| ||||||||
Sbjct 38 AGGAGCTGCTGAAGAAGATGATAGAGCTAGAGAAAAGTCAGGAGCATCTAATGCAGGAGA 97
Query 68 TGTCTAGGCTCAAGCTCTCCACGGAGCTTAGGCTGCCGATGATGTTGCCGCG-CCGGCCG 126
||||| |||||||| |||||||||||||| || | || || | ||| || | |
Sbjct 98 TGTCTCGGCTCAAGGTCTCCACGGAGCTTCGGAAG--GA-GA-G---CCGTATCCAGT-G 149
Query 127 TTGAGCCGT-A-TCC-AGGG-ATCACCCGGGAAGTTCACTGATAAACAGTATTTGAATAT 182
|| || | | || || ||| ||| ||||||||||| ||||||||||| | |||||
Sbjct 150 TT---CCATGAATCTGAGACCATCGCCCTGGAAGTTCACTCATAAACAGTATCTCAATAT 206
Query 183 TTTGCAGTCGTTGGCTCAATCTGTTCATGTCTTAGATCTCAATACACGAATTATCTTTTG 242
||||||||| |||| ||||||||||||| ||| |||||||||| ||||||||||||||
Sbjct 207 TTTGCAGTCCATGGCACAATCTGTTCATGCCTTCGATCTCAATATGCGAATTATCTTTTG 266
Query 243 GAATGCCATGTCGGAAAAGCTGTATGGGTACTCTGCTGCAGAAGTAGTTGGGA-AGAACC 301
|||||| ||| |||||||| | |||||||||||||||||||||| |||||| | ||||||
Sbjct 267 GAATGCTATGGCGGAAAAGGTTTATGGGTACTCTGCTGCAGAAGCAGTTGG-ACAGAACC 325
Query 302 C-AGTTCATGTTATTGTAGATGATCAGAATGCTGCCTTTGCCTTGAATGTTGCTCGACGT 360
| | || | ||||| |||||||||| | ||||| |||||||| ||| | |||||| || |
Sbjct 326 CTA-TTGACGTTATGGTAGATGATCGGGATGCTCCCTTTGCCATGACTATTGCTCAACTT 384
Query 361 TGCGTC-AATGGAGAGAGCTGGACTGGTGAGTTTCCTGTCAAGAC-CA-AATCAGGGGTC 417
|| || |||||||||||||||||||| |||||||||||||| | || || |||| |
Sbjct 385 TGT-TCCAATGGAGAGAGCTGGACTGGCAAGTTTCCTGTCAAG-CGCAGAA-CAGGAGAG 441
Query 418 ATCTTTTCAGCTGTCACTACGTGTTCCCCCTTTTATGATGATAACGGCACTATTCTTGGT 477
| || |||||||||||||||||||||||||| |||| |||| |||| || || ||||
Sbjct 442 AAATTCTCAGCTGTCACTACGTGTTCCCCCTTCTATGCTGATGACGGTTCTCTTATTGGG 501
Query 478 ATCATTTCTATCACAAGTGATATAGCACCCTATCTCAACCCCAGACTCTCTTTGCCTAAA 537
||| |||||||||||||||| ||||||| ||||| ||||| | | |||||||| |||||
Sbjct 502 ATCGTTTCTATCACAAGTGACGTAGCACCATATCTGAACCCAACAATCTCTTTGGCTAAA 561
Query 538 TTGAAG 543
|| |||
Sbjct 562 TTAAAG 567
Score = 174 bits (94), Expect = 3e-42
Identities = 119/131 (91%), Gaps = 2/131 (2%)
Strand=Plus/Plus
Query 568 AAAGGAGCTGTT-TCATCGAAACTTGGCCTTCACTCTGATCAGCCTATACAAGTTGCTAT 626
|||||||||||| | |||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 637 AAAGGAGCTGTTGT-ATCGAAACTTGGCCTTGATTCTGATCAGCCTATACAAGTTGCTAT 695
Query 627 AGCATCAAAGATATCAAATTTGGCATCCAAGCTGGGCAACAAGTTCAGGTCCAAAATGCG 686
||||||||||||||| |||||||||||||| || | |||||| ||||||| |||||||
Sbjct 696 AGCATCAAAGATATCTGATTTGGCATCCAAGGTGAGAAACAAGGTCAGGTCGAAAATGCC 755
Query 687 AGCAGGTGATA 697
|||||||||||
Sbjct 756 AGCAGGTGATA 766
Score = 139 bits (75), Expect = 1e-31
Identities = 85/90 (94%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 1973 GATACAAAGCTGAGACCCACATTCCAAGAACTGATGGAGAAACTAAGAGACCTGCAAAGA 2032
||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2050 GATGCAAAGCTGAGACCCACATTCCAAGAACTGATGGAGAGACTAAGAGACCTGCAAAGA 2109
Query 2033 AAGTATACCATACAGTTCCAGGGGACTCGT 2062
|||||||| ||||||||||| | |||||||
Sbjct 2110 AAGTATACAATACAGTTCCAAGCGACTCGT 2139
> AT1G67890.1 | Symbols: | PAS domain-containing protein tyrosine
kinase family protein | chr1:25457179-25462792 FORWARD LENGTH=2820
Length=2820
Score = 935 bits (506), Expect = 0.0
Identities = 1018/1256 (81%), Gaps = 72/1256 (6%)
Strand=Plus/Plus
Query 704 CTGACCACATGGACGATGCAGCATCAAGTGGTGCCAGCACATCTAGAGAGG-ATTTTATC 762
||||||| | ||| ||||||| | ||| || ||| |||||| |||| | || |||| |||
Sbjct 1119 CTGACCAGAGGGAAGATGCAGAAACAAATGATGCTAGCACACCTAG-GGGGAATTTGATC 1177
Query 763 CAGTCTCCTTTTGGTATATTCACATGTAACGATGACAAGT-TTCCTTCAAAACCCTTCAA 821
||||||||||||||| | ||| |||||||||||| |||| || |||||||| ||| |
Sbjct 1178 CAGTCTCCTTTTGGTGTGTTCTTATGTAACGATGATAAGTCTT-CTTCAAAAGCCTCCGG 1236
Query 822 AGATTCCAGTAATGAGAGTGATAGAAAGC-CTGCAATCCAGAAGGTTCCCACCTCAAAAG 880
||| |||| | |||| | ||||||||| | ||| ||| ||| | ||||| ||||
Sbjct 1237 AGAATCCAATGATGAAAATGATAGAAA-CTCTGTTGTCCCTAAGAAACTTACCTC-AAAG 1294
Query 881 -CTGAAGAATGGATGGTAAAGAAA-GATTTGTCACGGCCATGGAAAGGGAATGAACAGGA 938
||||||| ||||||||||||||| || ||||| ||||||||||||| ||||| | |||
Sbjct 1295 ACTGAAGAGTGGATGGTAAAGAAAGGA-CTGTCATGGCCATGGAAAGGAAATGAGCGGGA 1353
Query 939 AGGTTCAGGAGTA-AAG-CCTACTCATTCTCTATGGCCTTGTGTACAGAATGAACAA-AA 995
||||| ||| | ||| | |||||||| | |||||||| || || ||||||||| ||
Sbjct 1354 AGGTT-TGGA-AAGAAGAAATGCTCATTCTGTGTGGCCTTGGGTGCATAATGAACAACAA 1411
Query 996 GAAAGGTA-AGTCTCACCAGA-TCAA-TCCATCT-TCTGGTATTAAGTCTGAAAGCCATG 1051
||| | | || |||| || | | || ||| | | | || ||||||||||||||| ||
Sbjct 1412 -AAA-GAAGAGGCTCATCATAGT-AATTCC-TATAAC-AGTGTTAAGTCTGAAAGCC-TG 1465
Query 1052 AC-TCTGAAAGTAATAAGCCTACTGATGATGACGAAGCTTCTAGTATGTGG-TCTTCCT- 1108
| |||||||||||| ||| | || |||| | | | |||| || || | |
Sbjct 1466 GCAAGTGAAAGTAATAAACCTGCCAATAATGA-G-A------A-TATG-GGTTC-TGTTA 1514
Query 1109 CTATAAAT-GCG-AA-C-G-GC-A-CAAGCAGCGGAAGTACCAGTAGGAGTGTTATGGAC 1161
| | ||| ||| || | | || | | ||| | ||||||||||| || ||||||||| ||
Sbjct 1515 ATGTGAATAGCGCAAGCAGTGCTAGC-AGCTGTGGAAGTACCAGCAGCAGTGTTATGAAC 1573
Query 1162 AAGATTGCTA-AAGG-TAGCTATC-ACTTGGAATATGAAATTTTATGGGATCATTTGACA 1218
||| ||| | | || |||| | | ||| || |||||||| |||||||| ||||||||
Sbjct 1574 AAGGTTG--ACATGGATAGCGA-CTGCTTAGACTATGAAATCTTATGGGAGGATTTGACA 1630
Query 1219 ATCGCG-GAACAAATTGGACAAGGTTCATGTGGAACTGTCTATCACGGTCTCTGGTTTGG 1277
|| | | |||||||| || |||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1631 ATTG-GAGAACAAATCGGGCAAGGTTCATGTGGAACTGTCTATCATGGTCTATGGTTTGG 1689
Query 1278 ATCTGATGTAGCTGTGAAA-GTGTTCTCCAAACAAGAATATTCAGAAGCGATCATAAAAT 1336
||||||||| ||||| ||| ||||| |||||||||||||||||||||| |||||||| ||
Sbjct 1690 ATCTGATGTGGCTGT-AAAGGTGTTTTCCAAACAAGAATATTCAGAAGAGATCATAACAT 1748
Query 1337 CTTTTAAACAAGAGGTATCGCTGATGAAAAGACTCAGGCATCCTAACGTCCTGCTGTTTA 1396
|||| |||||||||||||| |||||||||| || || ||||| ||||| ||||||||||
Sbjct 1749 CTTTCAAACAAGAGGTATCATTGATGAAAAGGCTTAGACATCCAAACGTTCTGCTGTTTA 1808
Query 1397 TGGGAGCTGTGACTTCACCCCAGCATCTCTGTATAGTGTCAGAG-TTCGTTCCACGTGGA 1455
||||||||||| | ||||| |||| ||| ||||||||| ||||| ||| | |||||||||
Sbjct 1809 TGGGAGCTGTGGCATCACCTCAGCGTCTTTGTATAGTGACAGAGTTTC-TACCACGTGGA 1867
Query 1456 AGTCTCTTCCGTCTACTGCAGA-GAAGTATGTCAAAACTTGATTGGAGGAGGCGTATCAA 1514
|||||||| ||| | ||||||| ||| | ||||||||| |||| |||| | |||||| |
Sbjct 1868 AGTCTCTTTCGTTTGCTGCAGAGGAA-CAAGTCAAAACTAGATTTGAGGCGACGTATCCA 1926
Query 1515 TATGGCCGT-GGACATTGCTCGCGGTATGAATTATCTTCACTGTTGTAGTTCACCCATCA 1573
||||| | | ||||||||||| || ||||||||||||||| |||||| | |||||||
Sbjct 1927 TATGG-CATCAGACATTGCTCGTGGCATGAATTATCTTCACCACTGTAGTCCTCCCATCA 1985
Query 1574 TCCATCGTGATCTGAAGTCGTCAAATCTTCTGGTAGA-CAGGAACTGGACCGTTAAGGTA 1632
| || ||||||||||||||||||||||| ||||| || | |||||||||| || |||||
Sbjct 1986 TTCACCGTGATCTGAAGTCGTCAAATCTACTGGTTGATC-GGAACTGGACTGTGAAGGTT 2044
Query 1633 GCTGACTTTGGTCTTTCGCGTATCAAGCATCAGACATACCTAACCAGCAAGTCGGGAAAG 1692
||||| ||||||||||| || ||||||||| |||| ||||| || | ||| | |||| |
Sbjct 2045 GCTGATTTTGGTCTTTCTCGCATCAAGCATGAGACGTACCTCACTA-CAA-AC-GGAAGG 2101
Query 1693 GGAACGCCTCAATGGATGGCACCAGAAGTTCTTCGAAATGAGTCTGCTGATGAGAAGTCT 1752
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 2102 GGAACGCCTCAATGGATGGCACCAGAAGTTCTTCGAAATGAGGCTGCTGATGAAAAGTCT 2161
Query 1753 GACATTTACAGCTTTGGAGTAGTACTATGGGAGCTTGCCACAGAGAAGATCCCTTGGGAA 1812
||| ||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 2162 GACGTTTACAGTTTTGGAGTAGTACTATGGGAGCTTGTGACAGAGAAGATCCCATGGGAA 2221
Query 1813 AATCTCAACT-CGATGCAGGTGATCGGAGCTGTGGGGTTCATGAACCAGAGGCTGGAAAT 1871
||||| || | | ||||||||||| ||||| ||||||||||||||||||||||||||| |
Sbjct 2222 AATCTAAA-TGCTATGCAGGTGATTGGAGCCGTGGGGTTCATGAACCAGAGGCTGGAAGT 2280
Query 1872 TCCAAAGGACATTGATCCTGATTGGATCT-CATTAATAGAGAGCTGCTGGCACAGC 1926
||||| ||| |||| ||| | ||||| | | ||||| || |||||||||||||||
Sbjct 2281 CCCAAAAGACGTTGACCCTCAGTGGAT-TGCTTTAATGGAAAGCTGCTGGCACAGC 2335
Score = 183 bits (99), Expect = 4e-45
Identities = 251/320 (78%), Gaps = 28/320 (9%)
Strand=Plus/Plus
Query 154 AAGTTCACTGATAAACAGTATTTGAATATTTTGCAGTCGT-TGGCTCAATCTGTTCATGT 212
|||||||| ||||||||||||||||||||||||||||| | |||||||| ||||||||||
Sbjct 455 AAGTTCACCGATAAACAGTATTTGAATATTTTGCAGTC-TATGGCTCAAGCTGTTCATGT 513
Query 213 CTTAGATCTCAATA-CACGAATTATCTTTTGGAA-TGCCATGTCGGAAAAGCTGTATGGG 270
||| ||||| ||| | | ||||||||||||||| | | ||| |||| ||||| |||||
Sbjct 514 CTTCGATCTTAATGGC-CAAATTATCTTTTGGAACT-CGATGGCGGAGAAGCTTTATGGA 571
Query 271 TACTCTGCTGCAGAAGTAGTT-GGGAAGAACCC-AGTTCATGTTATT-GTAGATGATCA- 326
| ||| |||||||||| ||| |||||| || | | || || | | | ||||||| |||
Sbjct 572 TTCTCAGCTGCAGAAGC-GTTAGGGAAGGACTCGA-TTAATAT-ACTCGTAGATGGTCAA 628
Query 327 GAATGCTGCCT-TTGCCTTGAATGT-TGCTC-GACGTTGC-GTCAATGGAGAGAGCTGGA 382
|| |||||| | |||| ||| | | || | |||||| | || ||||||||| ||||
Sbjct 629 GA-TGCTGC-TGTTGCAAAAAATATCTT-TCAG-CGTTGCAG-CAGTGGAGAGAGTTGGA 683
Query 383 CTGGTGAGTTTCCTGTCAAGACCAAA-TCAGGG-GTCATCTTTTCAGCTGTCACTACG-T 439
|||| ||||||||||| |||| ||| | ||| | | ||||| | ||| |||||| |
Sbjct 684 CTGGAGAGTTTCCTGTTAAGAATAAAAT--GGGAGAGAGGTTTTCGGTTGTGACTACGAT 741
Query 440 GTTCCCCCTTTTATGATGAT 459
||| || ||||||||||||
Sbjct 742 -TTCTCCTTTTTATGATGAT 760
> AT5G49470.2 | Symbols: | PAS domain-containing protein tyrosine
kinase family protein | chr5:20063448-20068665 FORWARD LENGTH=3018
Length=3018
Score = 510 bits (276), Expect = 2e-143
Identities = 621/780 (80%), Gaps = 53/780 (7%)
Strand=Plus/Plus
Query 703 GCTGACCACATGGACGATGCAGCATCAAGTGGTGCCAG-CACATCTAGAGAGGATTTTAT 761
||||||| | ||| ||||||||| ||||||||| | | ||| |||| | |||||||||
Sbjct 1111 GCTGACCGGAGGGAGGATGCAGCAACAAGTGGTG-CTGATACACCTAGGGGGGATTTTAT 1169
Query 762 CCAGTCTCCTTTTGGTATATTCACATGTAACGATGA-CAAGTTTCCTTCAAAACCCTTCA 820
||| |||||||||||| ||||| | ||| |||||| ||| || || |||| |||||||
Sbjct 1170 CCAATCTCCTTTTGGTGTATTCTTACGTAGCGATGAGAAAGCTT-CTACAAAGCCCTTCA 1228
Query 821 AAGATTCCAGTAATGAGAGTGATAGAAAGC-CTGCAAT-CCAGAAGGTTCCCACCTCAAA 878
|||||||||| |||| |||||| |||| | ||| | || || | ||||||||
Sbjct 1229 GAGATTCCAGTGATGAAAGTGATGGAAA-CTCTGTTGTACC-TAAAACACTGACCTCAAA 1286
Query 879 AGCTGAAGAATGGATGGTAAAGAAA-GATTTGTCACGGCCATGGAAAGGGAATGAACA-G 936
||||||||| ||||||||||||||| || || ||| |||||||||||||||||||| | |
Sbjct 1287 AGCTGAAGAGTGGATGGTAAAGAAAGGA-TTATCATGGCCATGGAAAGGGAATGAA-AGG 1344
Query 937 GAAGGTTCAGG-AGTAAAGCCTACTCATTCTCTATGGCCTTGTGTACAGAATGAACAA-A 994
||||||| || || || || || ||||||| | |||||||| || | |||||||||| |
Sbjct 1345 GAAGGTT-TGGAAGGAAGGCGTAGTCATTCTGTGTGGCCTTGGGTGCGGAATGAACAACA 1403
Query 995 AGAAAGGTA-AGTCTCACCAGATCAA-TC-CATCTTCTGGTATTAAGTCTGAAAGCCATG 1051
| ||| | || || | || | ||| || ||| | || |||||||||||||||| |
Sbjct 1404 A-AAA-CAACAGGCTTATCAAAGCAATTCTAATC-AC-AGTGTTAAGTCTGAAAGCCA-G 1458
Query 1052 AC-TCTGAAAGTAATAAGCCTACTGATGATGACGAAG-CT-TCTAGTATGTGGTCTTCCT 1108
| | |||||||| |||| || | | | | ||| || || | |||| ||||||||||
Sbjct 1459 GCATGTGAAAGTATTAAGGCTTC-CA-G-TAACG-AGCCTATGGGGTAT-TGGTCTTCCT 1513
Query 1109 CTATAAATGCGAAC-G-----GCA-CA--AGCAGC---GGAAGTACCAGTAGGAGTGTTA 1156
|| | |||| |||| | ||| | |||||| ||||||||||| || |||||||
Sbjct 1514 CTGTTAATGTGAACAGCACAAGCAGTAGTAGCAGCTGTGGAAGTACCAGCAGCAGTGTTA 1573
Query 1157 TGGACAAGATTGCTAAAGG-TAGCT-ATC-ACTTGGAATATGAAATTTTATGGGATCATT 1213
|| ||||| | | | | || ||| | | | |||||| |||||||| |||||||| |||
Sbjct 1574 TGAACAAGGTCGAT-ATGGATAG-TGA-CTGCTTGGATTATGAAATCTTATGGGAAGATT 1630
Query 1214 TGACAATCGCG-GAACAAATTGGACAAGGTTCATGTGGAACTGTCTATCACGGTCTCTGG 1272
||||||| | | |||||||| || |||||||||||||||||||||||||||||||| |||
Sbjct 1631 TGACAATTG-GAGAACAAATCGGGCAAGGTTCATGTGGAACTGTCTATCACGGTCTATGG 1689
Query 1273 TTTGGATCTGATGTAGCTGTGAAAG-TGTTCTCCAAACAAGAATATTCAGAAGCGATCAT 1331
|||||||| ||||| ||||| |||| |||| |||||||||||||||||||||| ||||||
Sbjct 1690 TTTGGATCCGATGTGGCTGT-AAAGGTGTTTTCCAAACAAGAATATTCAGAAGAGATCAT 1748
Query 1332 AAAATCTTTTAAACAAGAGGTATCGCTGATGAAAAGACTCAGGCATCCTAACGTCCTGCT 1391
|| |||||||| ||||||||||||| ||||||||||||| || ||||||||||| | ||
Sbjct 1749 AACATCTTTTAGACAAGAGGTATCGTTGATGAAAAGACTTAGACATCCTAACGTTTTACT 1808
Query 1392 GTTTATGGGAGCTGTGACTTCACCCCAGCATCTCTGTATAGTGTCAGAGTTCGTTCCACG 1451
|||||||||||| ||||| ||||| |||| ||||||||||||| |||||||| |||||||
Sbjct 1809 GTTTATGGGAGCCGTGACATCACCTCAGCGTCTCTGTATAGTGACAGAGTTCCTTCCACG 1868
Score = 392 bits (212), Expect = 7e-108
Identities = 335/395 (85%), Gaps = 6/395 (2%)
Strand=Plus/Plus
Query 1531 GCTCGCGGTATGAATTATCTTCACTGTTGTAGTTCACCCATCATCCATCGTGATCTGAAG 1590
||||| || ||||||||||||||| ||||| | |||| ||||| || || ||| |||||
Sbjct 2140 GCTCGTGGCATGAATTATCTTCACCATTGTACTCCACCGATCATTCACCGAGATTTGAAG 2199
Query 1591 TCGTCAAATCTTCTGGTAGACAGGAACTGGACCGTTAAGGTAGCTGACTTTGGTCTTTCG 1650
|| |||||||| ||||| || | ||||||||||| ||||| ||||||||||||||||||
Sbjct 2200 TCATCAAATCTACTGGTTGATAAAAACTGGACCGTGAAGGTTGCTGACTTTGGTCTTTCG 2259
Query 1651 CGTATCAAGCATCAGACATACCTAACCAGCAA-GTCGGGAAAGGGAACGCCTCAATGGAT 1709
|||||||||||| |||| ||||| || | ||| | | |||| ||||||||||||||||||
Sbjct 2260 CGTATCAAGCATGAGACGTACCTCACTA-CAAAGACAGGAAGGGGAACGCCTCAATGGAT 2318
Query 1710 GGCACCAGAAGTTCTTCGAAATGAGTCTGCTGATGAGAAGTCTGACATTTACAGCTTTGG 1769
|||||| |||||||| ||||||||| |||||||||| ||||||||| |||||||||||||
Sbjct 2319 GGCACCGGAAGTTCTCCGAAATGAGGCTGCTGATGAAAAGTCTGACGTTTACAGCTTTGG 2378
Query 1770 AGTAGTACTATGGGAGCTTGCCACAGAGAAGATCCCTTGGGAAAATCTCAACT-CGATGC 1828
|||| ||||||||||||| | || ||||||||||| ||||||| ||| || | | ||||
Sbjct 2379 AGTAATACTATGGGAGCTGGTGACTGAGAAGATCCCGTGGGAAAGTCTAAA-TGCTATGC 2437
Query 1829 AGGTGATCGGAGCTGTGGGGTTCATGAACCAGAGGCTGGAAATTCC-AAAGGACATTGAT 1887
||||||| |||||||| ||||||||||||||||| |||||| | || ||| | |||||
Sbjct 2438 AGGTGATTGGAGCTGTAGGGTTCATGAACCAGAGACTGGAAGTCCCGAAAA-ATGTTGAT 2496
Query 1888 CCTGATTGGATCTCATTAATAGAGAGCTGCTGGCA 1922
||| | ||||| || ||||| || |||||||||||
Sbjct 2497 CCTCAGTGGATTTCTTTAATGGAAAGCTGCTGGCA 2531
Score = 233 bits (126), Expect = 4e-60
Identities = 280/353 (79%), Gaps = 16/353 (5%)
Strand=Plus/Plus
Query 154 AAGTTCACTGATAAACAGTATTTGAATATTTTGCAGTCGT-TGGCTCAATCTGTTCATGT 212
|||||||| ||||||||||||||||||||||||||||| | |||||||| ||||||||||
Sbjct 454 AAGTTCACCGATAAACAGTATTTGAATATTTTGCAGTC-TATGGCTCAAGCTGTTCATGT 512
Query 213 CTTAGATCTCAATA-CACGAATTATCTTTTGGAA-TGCCATGTCGGAAAAGCTGTATGGG 270
||| ||||| ||| | | ||||||||||||||| | | ||| |||| ||||| |||||
Sbjct 513 CTTCGATCTAAATGGC-CAAATTATCTTTTGGAACT-CAATGGCGGAGAAGCTTTATGGA 570
Query 271 TACTCTGCTGCAGAAGTAGTTGGGAAGAACCC-AGTTCATGTTATTGTAGATGATCAGAA 329
| ||| ||| |||||| | | |||||| | || | || || || ||||||||| |||| |
Sbjct 571 TTCTCAGCTTCAGAAGCACTGGGGAAGGATCCGA-TTGATATTCTTGTAGATGTTCAGGA 629
Query 330 TGCTGCCTTTGC-CTTGAATGTTGCTCGACGTTGC-GTCAATGGAGAGAGCTGGACTGGT 387
|||| | |||| | |||| | |||| |||||| || | ||||||||| |||||||||
Sbjct 630 TGCTTCGGTTGCACA-GAATATCACTCGGCGTTGCAGT-AGTGGAGAGAGTTGGACTGGT 687
Query 388 GAGTTTCCTGTCAAGACCAAATCAGGGGTCATCTTTTCAGCTGTCACTACG-TGTTCCCC 446
||||||||||| |||| |||| | || | | ||||||| ||| |||||| ||| | ||
Sbjct 688 GAGTTTCCTGTAAAGAACAAAGCTGGAGAGAGGTTTTCAGTTGTGACTACGATGT-CTCC 746
Query 447 CTT-TTATGATGATAACGGCACTATTCTTGGTATCATTTCTATCACAAGTGAT 498
|| |||||||||| | || | || |||| ||||| | |||||||| ||||
Sbjct 747 -TTCTTATGATGATGATGGTTGTCTTATTGGGATCATATGTATCACAAATGAT 798
> AT1G18230.1 | Symbols: | pseudogene, putative protein kinase
| chr1:6272666-6273307 REVERSE LENGTH=642
Length=642
Score = 76.8 bits (41), Expect = 8e-13
Identities = 43/44 (98%), Gaps = 0/44 (0%)
Strand=Plus/Plus
Query 1749 GTCTGACATTTACAGCTTTGGAGTAGTACTATGGGAGCTTGCCA 1792
|||||||||||||||||||||||||||| |||||||||||||||
Sbjct 469 GTCTGACATTTACAGCTTTGGAGTAGTATTATGGGAGCTTGCCA 512
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 102911117250
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5