BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg903647
Length=2394
Score E
Sequences producing significant alignments: (Bits) Value
AT3G07520.1 | Symbols: ATGLR1.4, GLR1.4 | glutamate receptor 1.... 3912 0.0
AT5G48400.2 | Symbols: ATGLR1.2, GLR1.2 | Glutamate receptor fa... 521 9e-147
> AT3G07520.1 | Symbols: ATGLR1.4, GLR1.4 | glutamate receptor
1.4 | chr3:2394891-2398291 REVERSE LENGTH=2816
Length=2816
Score = 3912 bits (2118), Expect = 0.0
Identities = 2295/2382 (96%), Gaps = 6/2382 (0%)
Strand=Plus/Plus
Query 1 ATGATTCGTAACACTGGTTATTTTCTAACTGTTTTCTTCCTCGCCTTCATTTCATTTGCA 60
|||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 13 ATGATTCGCAACACTGGTTATTTTCTAACTATTTTCTTCCTCGCCTTCATTTCATTTGCA 72
Query 61 GTAACATGCAGCGGAACTAAT-aaaaaaaaaGACGTAGATAGACTTTCA-TCAGTGCACG 118
||||||||||||||||||||| ||||| | | |||||||||||||| || | |||| |||
Sbjct 73 GTAACATGCAGCGGAACTAATCAAAAAGATA-ACGTAGATAGACTTCCAGT-AGTGTACG 130
Query 119 AAGATGTTCGGATTGGTTTGGTGGTGGACATGGGTTCCATGGAAGGCAAGTTTGTGACAA 178
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 131 AAGATGTTCGGATAGGTTTGGTGGTGGACATGGGTTCCATGGAAGGCAAGCTTGTGACAA 190
Query 179 GTTCGATTTCCATGGCGCTTTCTGATTTCTATAATGTCAACACTGGCTACAGAACAAGAG 238
||||||||| ||||||||||||||||||||| ||||||||| |||||| ||||||||||
Sbjct 191 CTTCGATTTCGATGGCGCTTTCTGATTTCTATCATGTCAACAATGGCTATAGAACAAGAG 250
Query 239 TCTCTGTCTTAACCAGAGACTCTCATGGTGACCCTCTCCAAGCTCTCGCTGCAGCCATGG 298
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 251 TCTCTGTCTTATCCAGAGACTCTCATGGTGACCCTCTCCAAGCTCTCGCTGCAGCCATGG 310
Query 299 ACCTCCTGCAAACTGAAAAAGTGGAGGCACTTGTTGGTGGACAATCGTTGCTTGAAGCAA 358
||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct 311 ACCTCCTGCAAACTGAACAAGTGGAAGCACTTGTTGGTGGACAATCGTTGCTTGAAGCAA 370
Query 359 AAATTTTGGCAGAGCTTGGGGAGAAAACTAAAGTTCCAGT-ATTTTCTTCTTTCCAAGTT 417
||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct 371 AAAATTTAGCAGAGCTTGGGGAGAAAACTAAAGTTCCAGTGA-TTTCTTCTTTCCAAGTT 429
Query 418 CCTAGCTCGTTGAGCTTGACCAAATATAATTACTTTATTCAAGCTACGCATGATACATCC 477
|||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct 430 CCTAGCTCGTTGAGCTTGGCCAAATATAATTACTTTATTCAAGCTACTCATGATACATCC 489
Query 478 TCTGAGGCAAAGGGAATCGCAGCTCTATTCAGCAATTTTGATTGGAGAACCGCTGTTCTT 537
||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 490 TCTGAAGCAAAGGGAATTGCAGCTCTGTTCAGCAATTTTGATTGGAGAACCGCTGTTCTT 549
Query 538 ATCTACGAGGATTATGATGACTGGAGAGAGAGTATACAACCTTTGGTTGGACATTTCCAA 597
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 550 ATCTACGAGGATGATGATGACTGGAGAGAGAGTATACAACCTTTGGTTGGACATTTCCAA 609
Query 598 CAGAACGCCATTCACATTGAGTACAAGGCGGAATTTTCGGTCTCATCTAATGAGGAATGT 657
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 610 CAGAACGCCATTCACATTGAGTACAAGGCGGAATTTTCTGTCTCATCTAATGAGGAATGT 669
Query 658 ATCATGAAGCAGCTAAGAAAGTTAAAGGCCTCTGGGATAAGGATTTTTGTTGCGCACATT 717
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 670 ATCATGAAGCAGCTAAGAAAGTTTAAGGCCTCGGGGATAAGGATTTTTGTTGCGCACATT 729
Query 718 TCTGAACAAATTGCAAATCGTCTCTTTCCATTTGCTCGGAGGTTAGGAATGATGGAGGAA 777
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 730 TCTGAACGAATTGCAAATCGTCTCTTTCCATGTGCTCGGAGGTTAGGAATGATGGAGGAA 789
Query 778 GGACATGCTTGGATCCTCACAGCGAGAAGCATGAATAATTTTCAAGACACAAACTATTTA 837
||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 790 GGATATGCTTGGATCCTCACAGCGAGAAGCATGAATAATTTTCAAGACACAAATTATTTA 849
Query 838 GCAAAGGAGGCAATGGAAGGTGTGATTGGTTTCAAGTCTTATATTCCATTGACTGAGGAG 897
||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 850 GCAAAAGAGGAAATGGAAGGTGTGATTGGTTTCAAGTCTTATATTCCGTTGACTGAGGAG 909
Query 898 CTTCACAACTTTACTTCGAGATGGAAGAGATCTTTGCGACTCGAAGAAGTAGTTACAGGG 957
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct 910 CTTCACAACTTTACTTTGAGATGGAAGAGATCTTTGCGACTCGAAGAAGTAGTTACAAGG 969
Query 958 ATGAGCGTTTGTAGCACATGGGCTCACGATATAGCTTGGAGTCTTGCAAGAGCAGCAGGA 1017
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 970 ATGAGCGTTTGTAGCATATGGGCTCACGATATAGCTTGGAGTCTTGCAAGAGCAGCAGAA 1029
Query 1018 GTTGCAAAGTTACCAGGTTTGCCAGTATATAACCTGCTTGAGGCAATTACAGAGGGTGCT 1077
||||||||||||||||||||| |||||||| ||||||||||||| ||| ||||| |||||
Sbjct 1030 GTTGCAAAGTTACCAGGTTTGTCAGTATATGACCTGCTTGAGGCTATTCCAGAGAGTGCT 1089
Query 1078 AAGCATAAAGGTTTGAGTGGTGACATGAAATTCATCGATAAGAAGTTTATCTCAGACAAG 1137
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1090 AAGCATAAAGGTTTGAGTGGTGACATCAAATTCATCGATAAGAAGTTTATCTCAGACAAG 1149
Query 1138 TTTGAGATTGTGAATATGATAGGGAGAGGTGAGAGAAGTGTAGGACTTTGGGATTCTGGT 1197
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1150 TTTGAGATTGTGAATATGATAGGGAGAGGTGAGAGAAGTGTAGGACTTTGGAATTCTGGT 1209
Query 1198 AGTTTCATCAGCAACAGAAGAAGACGATTGTCTTCTACCAATGCACTTGAGACAATCATC 1257
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 1210 AGTTTCATCAGCAATAGAAGAAGACGTTTGTCTTCTACCAAAGCACTTGAGACAATCATC 1269
Query 1258 TGGCCTGGAGGGTCTACAAGAGTTCCAAAAATCCGTTCGTTGAAAGAGAAGAGACATGGT 1317
||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||
Sbjct 1270 TGGCCTGGAGGGTCTACAAGAATTCCGAAAATCCGTTCGTTGAAAGAGAAGAGGCATGGT 1329
Query 1318 AAAAAGAAGAAGCTGAGAGTTTTAGTACCAGCGGGAAACATAAATCCGCAAATACTGGAA 1377
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct 1330 AAAAAGAAGAAGCTGAGAGTTTTAGTACCAGCAGGAAACATAACTCCGCAAATACTGGAA 1389
Query 1378 GTGAAAACAGATTTAAAAACTGGAGTCACGGCTGCTACAGGTTACTGTATTGAAGTTTTT 1437
|||||||||||||| |||||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct 1390 GTGAAAACAGATTTTAAAACTGGAGTCACAGCTGCTACAGGATACTGTATTGACGTTTTT 1449
Query 1438 GAGACATCAATTCTACCTTTCAATTATGAAGTGGAGTACATACCTTGGCCTGGTGCAATT 1497
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1450 GAGACATCAATCCTACCTTTCAATTATGAAGTGGAGTACATACCTTGGCCTGGTGCAATT 1509
Query 1498 AACTACAAGAACTACAACGATCTTCTCTACACACTGTATAGCCAGAAAGACAAGTACGAT 1557
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct 1510 AACTACAAGAACTACAACGATCTTGTGTACACACTGTATAGCCAGAAAGACAAGTACGAT 1569
Query 1558 GCAGCTGTTGGGGATATCACGATTACTGATAACAGATCTTTATATGTAGATTTTACATTA 1617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1570 GCAGCTGTTGGGGATATCACGATTACTGATAACAGATCTTTATATGTAGATTTTACATTA 1629
Query 1618 CCTTTCACTGATATGGGTCTCGCAGTTGTGACTGCCAAAGACAAAAGCATGTGGATTATC 1677
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1630 CCTTTCACTGATATGGGACTCGCAGTTGTTACTGCCAAAGACAAAAGCATGTGGATTATC 1689
Query 1678 TTTAAGCCTTTGACACTTAGTCTTTGGCTAACAATTGCAACTTTCTTTATCTTGACGGGG 1737
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1690 TTTAAGCCTTTGACACTTAGTCTTTGGCTAACAATTGCAAGTTTCTTTATCTTGACGGGG 1749
Query 1738 GCTATAGTTTGGTTGATAGAGCGGCATGATAACACTGACTTCCAAGGCTCTTGTTTCCAA 1797
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1750 GCTATAGTTTGGTTGATAGAGCGGCATGATAACGCTGACTTCCAAGGCTCTTGTTTCCAA 1809
Query 1798 CAGATTGGAACATTGCTATGTTTTGGGTTCTCGACCCTTGTCTTTGCCCATCGGGAGAGG 1857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1810 CAGATTGGAACATTGCTATGTTTTGGGTTCTCGACCCTTGTCTTTGCCCATCGGGAGAGG 1869
Query 1858 CTACAACATAATATGTCAAGATTTGTAGTTATTGTTTGGATATTTGCAGTGCTTATATTG 1917
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1870 CTGCAACATAATATGTCAAGATTTGTAGTTATTGTTTGGATATTTGCAGTGCTTATATTG 1929
Query 1918 ACTTCAAATTACACTGCAACGTTGACATCAGTGATGACGGTTCAACAGATACGAGGGTTG 1977
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1930 ACTTCAAATTACACTGCAACGTTGACATCAGTGATGACGGTTCAACAGATACGCGGGTTG 1989
Query 1978 AAATCAAACGAAAACATTGGCTTCTTTTCTGCCTCTATAGCAGCAAATGTGGTTAATGAG 2037
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1990 AAATCAAACGAAAACATTGGCTTCTTTTCTGCCTCTATTGCAGCAAATGTGGTTAATGAT 2049
Query 2038 AATCCTACGTTCCAAGGACCTAGATACAAGGGATTAAAGACAGCTGACGATTTTACAAAT 2097
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2050 AATCCTACGTTCCAAGGACCGAGATACAAGGGATTAAAGACAGCTGACGATTTTACAAAT 2109
Query 2098 GCTTTAAGGAATGGAACTATCTCGTTCATCGTCGATGAAGTTCCATATGTAAAGCTCTTT 2157
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2110 GCTTTAAGGAATGGAACTATCTCGTTTATCGTCGATGAAGTTCCATATGTAAAGCTCTTT 2169
Query 2158 GTTGCAAAACACCCTTCAGAATTCGAAATTGTCAAAACCGAAAGCGTCACCAACGGCTTT 2217
|||||||| |||||||||||||||| |||||| ||||||||||||| ||||||||||||
Sbjct 2170 GTTGCAAAGCACCCTTCAGAATTCGTCATTGTCGAAACCGAAAGCGTAACCAACGGCTTT 2229
Query 2218 GGATTTGCTTTCCAGAAAGGTTCTCCTTTGGTTCAGAAGGTGACAAGAGAAATCGCAAAG 2277
||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||
Sbjct 2230 GGATTTGCTTTCCAGAAAGGTTCTCCTTTGGTTCAAAAGGTGTCAAGAGAAATCGAAAAG 2289
Query 2278 CTAAGAAGAACAGAGAAGCTAAAAGCCATAGAGAATTGGTGGTTCCAGAGACAAACGACG 2337
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2290 CTAAGGAGAACAGAGAAGCTAAAAGCCATAGAGAATTGGTGGTTCCAGAGACAAACGACG 2349
Query 2338 TCAGCCACAAGCGAGGATACGTTCCATCCTCTCACAGTTTAC 2379
||||||||||||||||||||||||||||||||||| || |||
Sbjct 2350 TCAGCCACAAGCGAGGATACGTTCCATCCTCTCACTGTATAC 2391
> AT5G48400.2 | Symbols: ATGLR1.2, GLR1.2 | Glutamate receptor
family protein | chr5:19616244-19619246 FORWARD LENGTH=2604
Length=2604
Score = 521 bits (282), Expect = 9e-147
Identities = 1408/1925 (73%), Gaps = 184/1925 (10%)
Strand=Plus/Plus
Query 136 TTGGTGGTGGACATGGGTTCCATGGAAGGCAAGTTTGTGAC-AAGTTC-GATTTCCATGG 193
||||| |||| |||||||| ||||||| ||| | ||| | ||||| | |||||||||
Sbjct 130 TTGGTTTTGGATTTGGGTTCCGTGGAAGGGAAGATAGTG-CGGAGTTCTG-TTTCCATGG 187
Query 194 CGCTTTCTGATTTCTA-TA-ATGTCAACACTGGCTACAGAACAAGAGTCTCTGTCTTAAC 251
| |||||||||||||| | | || ||| || ||||| ||||||| ||||| | |||
Sbjct 188 CTCTTTCTGATTTCTACGACA-ATC-ACAATGACTACAAAACAAGACTCTCTCTTTTAGT 245
Query 252 CAGAGACTCTCATGGTGACCCTCTCCAAGCTCTCGCTGCAGCCATGGACCTCCTGCAAAC 311
|||||| |||||||| || ||||| | ||||| | | ||| | || | ||||||||
Sbjct 246 CAGAGATTCTCATGGAGAGCCTCTTCTTGCTCTTGATTCAGTTGTAGATTTGCTGCAAAC 305
Query 312 TGAAAAAGTGGAGGCACTTGTTGG-TGGACAATCGTTGCTTGAAGCAAAAATTTTGGCAG 370
||| |||| | ||| | |||| ||| | |||||||| ||||| || ||||||| |
Sbjct 306 AGAAGGAGTGCAAGCAATAATTGGCGGGA-ACTCGTTGCTAGAAGCGAAGCTTTTGGCGG 364
Query 371 AGCTTGGGGAGAAAACTAAAGTTCCAGT-ATTTTCTTCTTTCCAAGT-TCCTA-GCTCGT 427
| ||||| |||||| ||| ||||| || | |||| | || || | ||| | | || |
Sbjct 365 AACTTGGAGAGAAAGCTAGGGTTCCTGTGA-TTTC-AC-TT--AACTCTCCCATG-TCAT 418
Query 428 TGAGC-TTGACCAAATATAATTACTTTATTCAAGCTACGCATGATAC-AT-CCTCTGAGG 484
|| | |||| |||||| | | |||| || ||||| || ||| | || | |||||||||
Sbjct 419 TG-TCATTGAGCAAATACACTCACTTGATCCAAGCCACACAT-A-ACTCTGCCTCTGAGG 475
Query 485 -CAAAGGGAATCGCAGCTCTATTCAGCAAT---TTTGATTGGAGA-ACCGCTGTTCTT-A 538
||| ||||| ||| || ||| | || |||||||||| | | | || ||||
Sbjct 476 TTAAA-GGAATTACAG--CT-TTCCTCCATGGGTTTGATTGGA-ACAGTGTTGCTCTTGT 530
Query 539 TCTACGAGGATTATGATGACTGGAGAGAGAGTATACAACCTT-TGGTTGGA-CATTTCCA 596
| || || ||| | |||||||||||||||||||| | | || ||| |||| ||||||||
Sbjct 531 TTTA-GAAGATCACGATGACTGGAGAGAGAGTATGC-ATTTTATGG-TGGACCATTTCCA 587
Query 597 ACAGAACGCCATTCACATTGAGTACAAGGCGGAATTTTCG-GTCTCATCTAATGAGGAAT 655
||||| | |||| | ||| ||||| | |||| | ||| | || | |||||| |
Sbjct 588 TGAGAACAACGTTCATGTACAGTCCAAGGTTG-CTTTTAGTGTCACTTCGAGTGAGGATT 646
Query 656 GTATCATGAAGCAG-CTAAGAAAG-TTAAAGGCCTCTGGG-ATAA-GGATTTTTGTTGCG 711
| | ||| | | | || | || || |||| || |||| | || | | |||||||
Sbjct 647 CTTTGATGGATC-GATTACGGGAGCTT-AAGGACT-TGGGAACAACTG-TCTTTGTTGTT 702
Query 712 CACATT-TCTGAACAAATTGCAAATCGTCTCTTTCCATTTGCTCG-GAGGTTAGGAATGA 769
||| || |||||| ||||||| ||||||||| |||| |||| | || ||||| ||||
Sbjct 703 CAC-TTGTCTGAAGTTATTGCAACTCGTCTCTTCCCATGTGCT-GAGAAATTAGGGATGA 760
Query 770 TGGAG-GAAGGACATGCTTGGATCCTCACAGCGAGAAGCATGAATAATTTTCAAGA-CA- 826
||| | ||||| ||||||||| || || | |||||||||| | |||||| || ||
Sbjct 761 TGG-GTGAAGGGTTTGCTTGGATTCTTACTTCCAGAAGCATGAGCAGTTTTCATGATCAG 819
Query 827 --CA--AACTATTTAGCAAAGGAGGCAATGGAAGGTGTGATTGGTTTCAAGTCTTATATT 882
|| || ||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 820 TTCATTGACGATTTAACAAAGGAGGCAATGGAAGGTGTGGTTGGTTTCAAGTCTTATATA 879
Query 883 CCATTGACTGAGGAGCTTCACAACTTTACTTCGAGAT-G-G-AAGAGA-T--CT-TTG-C 934
||| || | | |||||||||||||| |||| ||||| | | || | | | || |||
Sbjct 880 CCAATGTCAAAAGAGCTTCACAACTTCACTTTGAGATGGAGAAAAACACTCCCTGTTGAA 939
Query 935 G-A-CT-CGAAGAAGT-AG-TTACAGGGATGAGCGTTTGTAGCACATGGGCTCACGATAT 989
| | | | | ||| || |||| || |||| | | | || ||||||||| ||| |
Sbjct 940 GAAGTTAC-TGGGAGTGAGATTACTCGGTTGAGTATCTCTGGCGTATGGGCTCATGATGT 998
Query 990 AGCTTGGAGTCTTGCAAGAGCAGCAGGAGTTG-CAAAGTTACCAGGTTTGCCAGTATATA 1048
||||||||||| || || ||||| | || || ||| | | ||| | || | || |
Sbjct 999 CGCTTGGAGTCTGGCGAGTGCAGCTGAAG-TGACAAGGATGCCAACTGTG--A-CAT-CA 1053
Query 1049 AC-CTGCTTGAGGCAATTACAGAGGGTGCTAAGCATAAAGGTTTGAGTGGTGACATGAAA 1107
|| || |||||||| | || | || || | | ||| ||| |||||||| || | |
Sbjct 1054 ACTCTCCTTGAGGCCA-TA-AAAGAAAGC-AGGTTTAAGGGTCTGAGTGGTAACTTTCAG 1110
Query 1108 TT-CATCGATAAGAAGTT-TATCTCAGACAAGTTTGAGATTGTGAATATGATAGGGAG-A 1164
|| || |||| |||||| | | |||||||||||||||||||||||||||||||| | |
Sbjct 1111 TTGGAT-GATATGAAGTTGT-TATCAGACAAGTTTGAGATTGTGAATATGATAGG-ATCA 1167
Query 1165 GGTGAGAGAAGTGTAGGACTT-TGGGATTCT---GGTAGTTTCATCAGCAACAGAAGAAG 1220
||||||||||| |||||| || ||| ||||| |||||||||| |||| ||||||
Sbjct 1168 GGTGAGAGAAGGGTAGGA-TTCTGGAATTCTAATGGTAGTTTCA---GCAATAGAAGAC- 1222
Query 1221 ACGATTGTCTTCTAC-CAATG-CACT-TG-AGACAATCATCTGGCCTGGAGGGTCTAC-- 1274
| ||| |||||||| || || || | || |||| || || ||||| || |||||| |
Sbjct 1223 A--ATTATCTTCTACTCA-TGACAATCTGGAGACCATAATTTGGCCCGGTGGGTCTGCTC 1279
Query 1275 AAGAGTTCCAAAAATCCGTTCGT-TGAAAGAGAAGAGACATGGTAAAAAGAAGAAGCTGA 1333
|| ||| || ||| | || | || |||| ||| | |||| ||| || | ||| |
Sbjct 1280 AA-AGT-CCGAAAGGGAGAA-GTCT-AA-GAGA-GAG-C--GGTAGAAA-AA-A-GCTTA 1327
Query 1334 GAGTT-TTAGT-ACCAGCGGGAAACATAAAT-CCGCAAATACTG--GAA-GTGAAAACAG 1387
| ||| || || || | | | || || || || ||| |||| ||| ||| | || |
Sbjct 1328 GGGTTCTT-GTTAC-ATCTAGCAA--TAGATTCC-CAAG-ACTGATGAAAGTGGAGACTG 1381
Query 1388 ATTTAA-AA-AC-TG-GAGTCACGGCTG-CTACAGG-TTACTGTATTGAAGTTTTTGAGA 1441
|| || || || || || | || || | | ||| || |||||| ||||| ||| ||
Sbjct 1382 ATCCAATAACACATGAGA-TAACAATTGTCGA-AGGGTT-CTGTATAGAAGTCTTTCAGG 1438
Query 1442 CATCAATT-CTACCTTTCAATTATGAAGTGGAGTACATACCTTGGC-CTGGTGCAATTAA 1499
|||| ||| | ||||||||| ||||||||||||||||||| ||||| | || || |||
Sbjct 1439 CATCCATTGC-ACCTTTCAACTATGAAGTGGAGTACATACGTTGGCTCAA-TGGAACTAA 1496
Query 1500 CTACAAGAACTACAACGATCTT-CTCTACACACTGT-ATAGCCAGAAAGACAAGTACGAT 1557
||||| | ||| | ||| | || |||| | |||||||||||||||| || |||
Sbjct 1497 CTACA----C--CAA-G--CTTGCA-TATGCACT-TCATAGCCAGAAAGACAAATATGAT 1545
Query 1558 GCAGCTGTTGGG-GATATCACGATTACTGATAACAGATCTTTATATGTAGATTTTACATT 1616
|| ||||| ||| ||||| || |||||| | ||||| | ||||| |||||||| ||
Sbjct 1546 GCTGCTGT-GGGAGATATTACAATTACTTCCGATAGATCGATGTATGTTGATTTTACGTT 1604
Query 1617 ACCTTTCACTGATATGGGTCTCGCAGTTGT-GACTGCCAAAG-ACAAAAGCATGTGGAT- 1673
|| | |||||| |||||||| | | |||| | | || |||| | | ||| |||||| |
Sbjct 1605 GCCATACACTGAAATGGGTCTTGGAATTGTAG-CAGC-AAAGGAGAGAAGTATGTGGGTG 1662
Query 1674 TATCTTT-AAGCCTTTGACACTTAGTCTTTGGCTAACAATTGCAACTTTCTTTATCTTGA 1732
| |||| || ||| | |||| | |||||| |||||| |||| |||||||| ||||||
Sbjct 1663 T-TCTTCCAA-CCTCTAACACCAAACCTTTGGATAACAAGTGCAGCTTTCTTTGTCTTGA 1720
Query 1733 CGGGGGCTATAGTTTGGTTGATAGAGCG-GCATGATAACACTGACTTCCAAGGCTCTTGT 1791
|||| |||||||||||||||||| | || ||| |||| || |||||||| |||||
Sbjct 1721 CGGGTATTATAGTTTGGTTGATAGAAAGAGC-TGAGAACAAAGAGTTCCAAGGATCTTGG 1779
Query 1792 T-TCCAACAGATTGGAACAT-TGCTATGTTTTGGGTTCTCGACCCTTGTCTT-TGCCCAT 1848
|| ||||||||||| | || | || ||||| ||||| |||||||| || ||| |||
Sbjct 1780 CCTC-AACAGATTGGAGT-TGTGATTTGGTTTGGCTTCTCTACCCTTGT-TTATGCTCAT 1836
Query 1849 CGGGAGAGGCTACAACATAA-TATGTCAAGATTTGTAGTTATTGTTTGGATATTTGCAGT 1907
||||||| ||||||||| || | | |||||||||||||||| |||||| ||||||| ||
Sbjct 1837 CGGGAGAAGCTACAACACAACT-TATCAAGATTTGTAGTTACAGTTTGGGTATTTGCGGT 1895
Query 1908 GCTTATATTGACTT-CAAATTACACTGCAACGTTGACATCAGTGATGACGGTTCAACAGA 1966
||| |||||| || ||| |||||||||||| ||||||||| |||||||||| ||||| |
Sbjct 1896 GCTCATATTGG-TTACAAGTTACACTGCAACATTGACATCAATGATGACGGTGCAACAAA 1954
Query 1967 TACGA 1971
|||||
Sbjct 1955 TACGA 1959
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 118874890560
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5