BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg903672 Length=1434 Score E Sequences producing significant alignments: (Bits) Value AT3G07730.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 1927 0.0 AT4G01170.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 1055 0.0 > AT3G07730.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01170.1); Has 1299 Blast hits to 1149 proteins in 206 species: Archae - 3; Bacteria - 100; Metazoa - 453; Fungi - 114; Plants - 108; Viruses - 2; Other Eukaryotes - 519 (source: NCBI BLink). | chr3:2468185-2469606 FORWARD LENGTH=1422 Length=1422 Score = 1927 bits (1043), Expect = 0.0 Identities = 1319/1447 (91%), Gaps = 40/1447 (3%) Strand=Plus/Plus Query 1 ATGAAGAAGAAAGCCATTGTGATTGACGATGGATATAGAAGGTTTATGCAT-ACTCGTCC 59 |||||||||||||||||||||||||| |||||||||| |||||||||| | | | | Sbjct 1 ATGAAGAAGAAAGCCATTGTGATTGATGATGGATATACAAGGTTTATG-GTGAAT-G--A 56 Query 60 AATGTCTGAGAAAATCGATGTTCCAATTATCTGTCTTGACGAAGATGAT-A--ATGATGA 116 ||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 57 AATGTCTGAAAAAATCGATGTTCCAATTATCTGTCTTGACGAAGATGATGATGATGATGA 116 Query 117 TCTTATGATTGATAAGGACTACAACGTGTTCTTGGATCATCTTCGAAGAGGTGATATTAA 176 ||||||| |||||||||| |||||||| |||||||||||||||||||||||||||| || Sbjct 117 TCTTATGGTTGATAAGGAGTACAACGTCTTCTTGGATCATCTTCGAAGAGGTGATAAGAA 176 Query 177 CAGTTTAACTC-CTCGCCTTGAGGTTGACAATGGAGAATCTGACATTCGTAGATTAAAGA 235 |||| || | |||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 177 AAGTTCAA-GCACTCGCCTTGAAGTTGACAATGGAGCATCTGACATTCGTAGATTAAAGA 235 Query 236 TCTTTTCTTGTGATTCAAAGAGACCAAAGCTTGGGAATGAGAATCCAGTGAAGAACAGAG 295 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct 236 TCTTTTCTTGTGATTCAAAGAGATCTAAGCTTGGGAATGAGAATCCAGTGAAGAACAGAG 295 Query 296 TTCATCAACAGGGCAAGAGGAGAACTGTTGG-GTTTAAGGCTGAAAGAGTTAATATCCGA 354 || |||||||| ||||||||| ||||||||| | || ||| |||||||||||| |||||| Sbjct 296 TTAATCAACAGAGCAAGAGGAAAACTGTTGGAG-TTGAGGTTGAAAGAGTTAAAATCCGA 354 Query 355 GAAAACATTCAACGAGACAACAGAGTTGCTGAACGAAGAAAGCGGAGAATTGCTGAGTTA 414 |||| ||||||| |||||||||||||||||||||||||||||||||| || || |||||| Sbjct 355 GAAATCATTCAAAGAGACAACAGAGTTGCTGAACGAAGAAAGCGGAGGATCGCAGAGTTA 414 Query 415 GAAGCTGCAAAGACTTCAAGAGATGTTCCTTCACTC-AAATCCCAACAAGAAGACACTCA 473 ||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||| ||| Sbjct 415 GAAGCTGCAAAGACTTCAAGAGACGTTCCTTCACTCGAAA-CCCAACAAGAAGACATTCA 473 Query 474 ACAACGAGACAACAAAGTTAGGAAACTTTCAGAGTCAAAGGCTGAGACTTTAAGAAGAGA 533 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 474 ACAACGAGACAACAAAGTTAGGAAACTTTCCGAGTCAAAGGCTGAGACTTTAAGAAGAGA 533 Query 534 TGATGTTCCATTGGTTGGAACTCAAGAAGACAGTCAACGAGACCACACAGTTTCTCAAGG 593 |||||||||||||||| |||||||||||||| |||| ||||| ||| |||| || || | Sbjct 534 TGATGTTCCATTGGTTAAAACTCAAGAAGACATTCAAAGAGACAACAGAGTTGCTGAACG 593 Query 594 GAGAAAGAGG-AATAATGACGATGCTTTAAGAAGAGATGTTCCATTGGTTGA-AACTGGA 651 ||||||||| ||| |||||||||||||| || |||||||||||||||| | ||||| | Sbjct 594 AAGAAAGAGGAAAT-GTGACGATGCTTTAATAAAAGATGTTCCATTGGTT-AGAACTGAA 651 Query 652 GAAGATATTCAACAGACTT-C---AGAGGCTGTTCACGTGGAGGGAGTAAATAGAGTTAC 707 |||| | ||| || || | ||| || |||||| ||| ||||| |||||||||| Sbjct 652 GAAG--A--CAAGAGGGTTGCTGTGGAGATTGATCACGTAGAGCGAGTACATAGAGTTAC 707 Query 708 AGAGGTTAATGATGTAGATGAGACTTCTTCAAGGAGCAAAGAAGTTTTTGTAGGGCGAAA 767 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 708 AGAGGTTAATGATGTAGATGAGACTTCTTCAAGGAGCAAAGAAGTTTTTGTAGGGAGAAG 767 Query 768 GAATAAGAATGAGGATGGGAGTGAAGCGGTTGTGGATAAGGATTACATGATGTACCTCAC 827 ||| |||||||| | |||||||||||||||||||||||||||||||||| ||||||||| Sbjct 768 GAAGAAGAATGA-G--GGGAGTGAAGCGGTTGTGGATAAGGATTACATGAGGTACCTCAC 824 Query 828 ATGGCTTGTAGATTCTCTTAGAGATTCTTCGACAACTGAGCCAATGGAAAATCTTCAGAA 887 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 825 ATGGCTTGTAGATTCTCTTAGCGA---TTCGACAACTGAGCCAATGGAAAATCTTCAGAA 881 Query 888 AGATCAGTCTGATTTGGATACTCTAAAAGAATCGACAATGGTCCCTGAAATGGATCCACT 947 || | |||| |||||||||||||||||||||||||||| |||||| |||||||||| Sbjct 882 AG---A---TGATATGGATACTCTAAAAGAATCGACAATGGTACCTGAATTGGATCCACT 935 Query 948 AGTAGAAGTGAAGGTTGAACCAGATCATGATTGGTCTGATTATATAATTGCCATGGGTGA 1007 |||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||| Sbjct 936 AGTAGAAGTGAAGGTTGAACCACATGATGATTGGTCTGATTATATAATTGCGATGGGTGA 995 Query 1008 TTCACCGTTTTTGGATGGAGAGGAGTGTACACCGTTTGTGGTGTCCAAGAAAGTGGTTGA 1067 ||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 996 TTCCCCTTTTTTGGATGGAGAGGAGTGTACACCGTTTGTGGCGTCCAAGAAAGTGGTTGA 1055 Query 1068 TCTAGATGAAGGAAGTAAAGAGGATGAAAGTAGTAGTAGTTGGTTTAGAAAGGAGCTAAT 1127 ||| ||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 1056 TCTTGATGAAGGAAGCAAAGAGAATGAAAGTAGTAGCAGTTGGTTTAGAAAGGAGCTAAT 1115 Query 1128 GGATGTTCTGCAAAAA-CCATATGATGAAGGAGAGTTGAAGCTGCTCCATCGTTACGCAT 1186 ||||||| || ||||| |||||||||||||||||| |||||| |||||||||||||| || Sbjct 1116 GGATGTTTTG-AAAAATCCATATGATGAAGGAGAGATGAAGCAGCTCCATCGTTACGTAT 1174 Query 1187 CAATCCATAGAAAAATGACTCGATGCAGAGAACTACGAAAGGGGAGAGAATCTGATTATG 1246 ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct 1175 CAATCCATAAAAAAATGACTCGATGCAGAGAACTACGAAAGGGAAGAGGATCTGATTATG 1234 Query 1247 AGACTGACGAACTTGGACAATCTTATCTAGAAAGTTTCCCTGATTTCGAAAAAGAATACA 1306 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1235 AGACTGACGAACTGGGACAATCTTATCTAGAAAGTTTCCCTGATTTCGAAAAAGAATACA 1294 Query 1307 AGCTTGTGGTTGGTGTTGATAAGGCAAGAGCATTGAAGTTGCTGCGTGGGTTTTTCTTGT 1366 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| | Sbjct 1295 AGCTTGTGGTTGGTGTTGATAAGGCAAGAGCTTTGAAGTTGCTGCGTGGCTTTTTCTTTT 1354 Query 1367 ACTTGAAATATGTTTCTCATGATGGTGTTTTCAAGCCTTGGGAGAGGAATCAAAGGTGGC 1426 ||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||| Sbjct 1355 ACTTGAAATATGTTTCTCATGATGGTGTTTTCAAGCCTTGGGAGAAGACTCAAAGTTGGC 1414 Query 1427 AACCTTA 1433 ||||||| Sbjct 1415 AACCTTA 1421 Score = 71.3 bits (38), Expect = 2e-11 Identities = 47/51 (92%), Gaps = 1/51 (2%) Strand=Plus/Plus Query 354 AGAAAACATTCAACGAGACAACAGAGTTGCTGAACGAAGAAAGCGGAGAAT 404 |||| |||||||| ||||||||||||||||||||||||||||| ||| ||| Sbjct 558 AGAAGACATTCAAAGAGACAACAGAGTTGCTGAACGAAGAAAGAGGA-AAT 607 > AT4G01170.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07730.1); Has 211 Blast hits to 211 proteins in 60 species: Archae - 0; Bacteria - 22; Metazoa - 50; Fungi - 11; Plants - 77; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). | chr4:499497-500831 FORWARD LENGTH=1335 Length=1335 Score = 1055 bits (571), Expect = 0.0 Identities = 699/758 (92%), Gaps = 19/758 (3%) Strand=Plus/Plus Query 681 TCACGTGGAGGGAGTAAATAGAGTTACAGAGGTTAATGATGTAGATGAGACTTCTTCAAG 740 ||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 591 TCATGTGGAGCGAGTAAATAGAGTTACAGAGGTTAATGATGTAGATGAGACTTGTTCAAG 650 Query 741 GAGCAAAGAAGTTTTTGTAGGGCGAAAGAATAAGAATGAGGATGGGAGTGAAGCGGTTGT 800 |||||||||||||||||||||| ||| ||| |||||||| | || |||||||||||||| Sbjct 651 GAGCAAAGAAGTTTTTGTAGGGAGAAGGAAGAAGAATGA-G--GGTAGTGAAGCGGTTGT 707 Query 801 GGATAAGGATTACATGATGTACCTCACATGGCTTGTAGATTCTCTTAGAGATTCTTCGAC 860 ||||||||||||||||| |||||||||||||||||||||||||||||| || |||||| Sbjct 708 GGATAAGGATTACATGAGGTACCTCACATGGCTTGTAGATTCTCTTAGGGA---TTCGAC 764 Query 861 AACTGAGCCAATGGAAAATCTTCAGAAAGATCAGTCTGATTTGGATACTCTAAAAGAATC 920 ||||||||||||||||||||||||||||| | |||| |||||||| |||||||||| Sbjct 765 AACTGAGCCAATGGAAAATCTTCAGAAAG---A---TGATATGGATACTTTAAAAGAATC 818 Query 921 GACAATGGTCCCTGAAATGGATCCACTAGTAGAAGTGAAGGTTGAACCAGATCATGATTG 980 ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 819 GACAATGGTACCTGAAATGGATCCACTAGTCGAAGTGAAGGTTGAACCAGATCATGATTG 878 Query 981 GTCTGATTATATAATTGCCATGGGTGATTCACCGTTTTTGGATGGAGAGGAGTGTACACC 1040 |||||||||||||||||| ||||||||||| ||||||||||||| ||| ||||||||||| Sbjct 879 GTCTGATTATATAATTGCGATGGGTGATTCGCCGTTTTTGGATGTAGAAGAGTGTACACC 938 Query 1041 GTTTGTGGTGTCCAAGAAAGTGGTTGATCTAGATGAAGGAAGTAAAGAGGATGAAAGTAG 1100 |||||||| |||||||||||| |||||||| ||||||||||| ||| || |||||||||| Sbjct 939 GTTTGTGGCGTCCAAGAAAGTAGTTGATCTTGATGAAGGAAGCAAAAAGAATGAAAGTAG 998 Query 1101 TAGT-AGTTGGTTTAGAAAGGAGCTAATGGATGTTCTGCAAA-AACCATATGATGAAGGA 1158 || | | ||||||||||||||||||||||||||||||| ||| ||||||||||||||| | Sbjct 999 TA-TCACTTGGTTTAGAAAGGAGCTAATGGATGTTCTG-AAACAACCATATGATGAAGAA 1056 Query 1159 GAGTTGAAGCTGCTCCATCGTTACGCATCAATCCATAGAAAAATGACTCGATGCAGAGAA 1218 ||| |||||| |||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct 1057 GAGATGAAGCAGCTCCATCGTGACGTATCAATCCATAGAAAAATGACTCGATGCAGAGAA 1116 Query 1219 CTACGAAAGGGGAGAGAATCTGATTATGAGACTGACGAACTTGGACAATCTTATCTAGAA 1278 ||||||||||| |||| ||||| ||||||||||| |||||| |||||||||||||||||| Sbjct 1117 CTACGAAAGGGAAGAGGATCTGTTTATGAGACTGGCGAACTGGGACAATCTTATCTAGAA 1176 Query 1279 AGTTTCCCTGATTTCGAAAAAGAATACAAGCTTGTGGTTGGTGTTGAT-A-A-GGCAAGA 1335 |||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||| Sbjct 1177 AGTTTCCCTGATTTCGAAAAAGAATACAAGCTTGTGGTTGGTGTTGATGATAAGGCAAGA 1236 Query 1336 GCATTGAAGTTGCTGCGTGGGTTTTTCTTGTACTTGAAATATGTTTCTCATGATGGTGTT 1395 || ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct 1237 GCTTTGAAGTTGCTGCGTGGCTTTTTCTTTTACTTGAAATATGTTTCTCATGATGGTGTT 1296 Query 1396 TTCAAGCCTTGGGAGAGGAATCAAAGGTGGCAACCTTA 1433 |||||||||||||||| || |||||| ||||||||||| Sbjct 1297 TTCAAGCCTTGGGAGAAGACTCAAAGTTGGCAACCTTA 1334 Score = 597 bits (323), Expect = 9e-170 Identities = 456/515 (89%), Gaps = 30/515 (6%) Strand=Plus/Plus Query 80 TTCCAATTATCTGTCTTGACGAAGATGATAATGATGATCTTATGATTGATAAGGACTACA 139 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 38 TTCCAATTATCTGTCTTGACGAAGATGATGATGATGATCTTATGATTGATAAGGACTACA 97 Query 140 ACGTGTTCTTGGATCATCTTCGAAGAGGTGATATTAACAGTTTAA-CTCCTCGCCTTGAG 198 |||| ||||||||||||||||||||| | | | ||| ||| | ||||| ||||| Sbjct 98 ACGTCTTCTTGGATCATCTTCGAAGA-G-G------A-AGTGTAAGC-CCTCGTCTTGAA 147 Query 199 GTTGACAATGGAGAATCTGACATTCGTAGATTAAAGATCTTTTCTTGTGATTCAAAGAGA 258 |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| | Sbjct 148 GTTGACAATGGAGAATCTGACATTCGTAAATTAAAGATCTTTTCTTGTGATTCGAAGATA 207 Query 259 CCAAAGCTTGGGAATGAGAATCCAGTGAAGAACAGAGTTCATCAACAGGGCAAGAGGAGA 318 ||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||| | Sbjct 208 TCAAAGCTTGAGAATGAGAATCCAATGAAGAACAGAGTTCATCAACAGGGCCAGAGGAAA 267 Query 319 ACTGTTGGGTTTAAGGCTGAAAGAGTTAATATCCGAGAAAACATTCAACGAGACAACAGA 378 ||||||||||| ||||||||||||| ||| |||| ||| | ||||||||||||||||||| Sbjct 268 ACTGTTGGGTTAAAGGCTGAAAGAGATAAAATCCAAGACATCATTCAACGAGACAACAGA 327 Query 379 GTTGCTGAACGAAGAAAGCGGAGAATTGCTGA-GTTAGAAGCTGCAAAGACTTCAAGAGA 437 ||||||||||||||||||||||| ||||| || |||||| ||||||||| |||||||||| Sbjct 328 GTTGCTGAACGAAGAAAGCGGAGGATTGC-GATGTTAGATGCTGCAAAGGCTTCAAGAGA 386 Query 438 TGTTCCTTCACTC-AAATCCCAACAAGAAGACACTCAACAACGAGACAACAAAGTTAGGA 496 ||||||| |||| ||| ||||||||||||||| ||||||||||| |||||| Sbjct 387 CGTTCCTTTACTCGAAA-CCCAACAAGAAGACATTCAACAACGAG---------TTAGGA 436 Query 497 AACTTTCAGAGTCAAAGGCTGAGACT-----TT-AAGAAGAGATGATGTTCCATTGGTTG 550 ||||||| || ||||||||||||||| || |||||||||||||||||||||||||| Sbjct 437 AACTTTCTGATTCAAAGGCTGAGACTGAGACTTTAAGAAGAGATGATGTTCCATTGGTTG 496 Query 551 GAACTCAAGAAGACAGTCAACGAGACCACACAGTT 585 ||| |||||||||||||||||||||| |||||||| Sbjct 497 GAAGTCAAGAAGACAGTCAACGAGACAACACAGTT 531 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 70682367360 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5