BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg903696 Length=1320 Score E Sequences producing significant alignments: (Bits) Value AT3G07970.1 | Symbols: QRT2 | Pectin lyase-like superfamily pro... 2224 0.0 > AT3G07970.1 | Symbols: QRT2 | Pectin lyase-like superfamily protein | chr3:2541006-2543432 FORWARD LENGTH=1382 Length=1382 Score = 2224 bits (1204), Expect = 0.0 Identities = 1280/1318 (97%), Gaps = 0/1318 (0%) Strand=Plus/Plus Query 1 ATGTATGAAAAGATCATAATCATATCAGTATTCCTCTTAACATTTCTTCCTTCTTGTTTC 60 ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct 1 ATGTATGAAAAGATCATAATCTTATCAGTATTTCTCTTAACATTTCTTCCTTCTTGTTTC 60 Query 61 AGCAGCTACCCATTTAATCATAGAGATGATCTTTTCATGTCTTCTAATGTTTATTATGAA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 AGCAGCTACCCATTTAATCATAGAGATGATCTTTTCATGTCTTCTAATGTTTATTATGAA 120 Query 121 ACCAATCGACAACATCAACATGGTCACAATACACGCAACAGTCACTTGAAAAATCGCCAT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 ACCAATCGACAACATCAACATGGTCACAATACACGCAACAGTCACTTGAAAAATCGCCAT 180 Query 181 GGTTATGCTCCTGGATCTTCTCCTCGAGCTTTTAACGTCAACACTTTTGGTGCTAAAGCC 240 |||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct 181 GGTTATGCTCCTAGATCTTCTCCTCGATCTTTTAACGTCAACACTTTCGGTGCTAAAGCC 240 Query 241 AACGGAAACGACGATTCTAAGGCATTCATGAAAGCCTGGGAAGCAGCTTGTTCATCGACT 300 ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| || || Sbjct 241 AACGGGAACGACGATTCTAAGGCCTTCATGAAAGCTTGGGAAGCAGCTTGTTCGTCAACC 300 Query 301 GGAATAGTTTACGTTGTGGTTCCAAACAATAGAGATTACATGCTTAAATCGGTTACATTC 360 |||||||||||| |||||| |||||| ||||||||||||||||||||| ||||||| ||| Sbjct 301 GGAATAGTTTACATTGTGGCTCCAAAGAATAGAGATTACATGCTTAAAGCGGTTACGTTC 360 Query 361 TCTGGTCCATGTAAATCAACCTTGATTATTTTTAAGATTTACGGAATGATTGAGGCATGG 420 |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| Sbjct 361 TCTGGTCCATGTAAATCATCCTTGATTATTTTTAAGATTTACGGAAGGATTGAGGCATGG 420 Query 421 AAAAATCCATCAGACTACAAGGAACGTAGGCATTGGATTGTGTTCGAAAATGTCGATAAC 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 421 GAAAATCCATCAGACTACAAGGAACGTAGGCATTGGATTGTGTTCGAAAATGTCAATAAC 480 Query 481 CTTCGAGTTGAAGGAGGTGGCCGCATCGACGGTAATGGACATATTTGGTGGCCAAACTCT 540 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 481 CTTCGAGTTGAAGGAGGTGGGCGCATCGACGGTAATGGACATATTTGGTGGCCAAAATCT 540 Query 541 TGCAAAATCAACCCTCAACTTCCATGCCTGGGAGCTCCAACGGCCGTTACGTTTGTGGAG 600 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct 541 TGCAAAATCAACCCTCAACTTCCTTGCCTGGGAGCTCCAACGGCGGTTACGTTTGTGGAG 600 Query 601 TGTAATAACTTGAGAGTTAGTAACATTAGGTTGGAAAACGCACAGCAAATGCATTTGACG 660 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 601 TGTAATAACTTGAGAGTAAGTAACATTAGGTTGGAAAACGCACAGCAAATGCATTTGACG 660 Query 661 TTCCAAGACTGCAAAAACGTGAAGGCTTTGAATCTTATGGTCACATCTCCGGCTGATAGT 720 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 TTTCAAGACTGCAAAAACGTGAAGGCTTTGAATCTTATGGTCACATCTCCGGCTGATAGT 720 Query 721 CCTAACACCGATGGCATTCACGTTACCGGAACTCAAAATATCTTAATTCAAGACTCTATC 780 |||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 721 CCTAACACTGATGGCATTCACGTTTCCGGAACTCAGAATATCTTAATTCAAGACTCTATC 780 Query 781 GTCCGTACTGGTGATGATTGTATATCGATAGTGAGTGGGTCGGAGAATGTGAGAGCGACA 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 781 GTCCGTACTGGTGATGATTGTATATCGATAGTGAGTGGGTCGGAGAATGTGAGAGCGACA 840 Query 841 GGCATTACGTGCGGCCCGGGTCATGGAATCAGCATTGGAAGTTTGGGAGAAGATAACTCA 900 |||||||| ||||| || |||||||||||||| ||||||||||||||||||||||||||| Sbjct 841 GGCATTACATGCGGGCCTGGTCATGGAATCAGTATTGGAAGTTTGGGAGAAGATAACTCA 900 Query 901 GAAGCATATGTTTCAAATGTGGTAGTCAACAAAGCGACTCTTATAGGAACCACTAATGGT 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 901 GAAGCATATGTTTCAAATGTGGTAGTCAACAAAGCGACTCTTATAGGAACCACTAATGGT 960 Query 961 GTGAGAATCAAGACTTGGCAGGGAGGACATGGAATGGCAAAGAACATCATATTCCAAGAC 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 961 GTGAGAATCAAGACTTGGCAGGGAGGACATGGAATGGCAAAGAACATCATATTCCAAGAC 1020 Query 1021 ATCATAATGAAAAACGTTACAAACCCAATAATCATCAACCAGGACTACTGCGATCGTGTT 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1021 ATCATAATGAAAAACGTTACAAACCCAATAATCATCAACCAGGACTACTGCGATCGTGTT 1080 Query 1081 GAATCATGTCCCGAACAGAAATCGGCGGTACAAGTGAGCAATGTGTTGTACAAAAACATA 1140 ||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1081 GAAGCATGCCCCGAACAGAAATCCGCGGTACAAGTGAGCAATGTGTTGTACAAAAACATA 1140 Query 1141 CAAGGGACGAGCTCAAGACCCATAGCTGTGAAATTTGTATGCAGCAAGAGCATTCCATGT 1200 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1141 CAAGGGACGAGCTCAAGACCCATAGCTGTGAAATTTGTATGCAGCAAGAACATTCCATGT 1200 Query 1201 CGAGGAATATCAATGCAAAACGTTAAATTGGTCGATCAAACTCAACAAGATGTATCCAAA 1260 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1201 CGAGGAATATCAATGCAAAACGTTAAACTGGTCGATCAAACTCAACAAGATGTATCCAAA 1260 Query 1261 GCTTCTTGCTCCAATGTGAAGTTGGACACCCGAGGAAATGTTTCTCCTCTTTGCACTT 1318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1261 GCTTCTTGCTCCAATGTGAAGTTGGACACCCGAGGAAATGTTTCTCCTCTTTGCACTT 1318 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 64959505230 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5