BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg903709
Length=1695
Score E
Sequences producing significant alignments: (Bits) Value
AT3G08510.1 | Symbols: ATPLC2, PLC2 | phospholipase C 2 | chr3:... 1469 0.0
AT3G55940.1 | Symbols: | Phosphoinositide-specific phospholipa... 747 0.0
> AT3G08510.1 | Symbols: ATPLC2, PLC2 | phospholipase C 2 | chr3:2582362-2585851
REVERSE LENGTH=2305
Length=2305
Score = 1469 bits (795), Expect = 0.0
Identities = 845/870 (97%), Gaps = 0/870 (0%)
Strand=Plus/Plus
Query 1 ATGTCGAAGCAAACGTACAAAGTGTGTTTCTGCTTTCGCCGGAGGTTTCGCTACACTGCA 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 296 ATGTCGAAGCAAACGTACAAAGTGTGTTTCTGCTTTCGCCGGAGGTTTCGTTACACTGCA 355
Query 61 TCGGAGGCACCGCGTGATATCAAGACCATTTTCGAAAAGTACTCAGAGAATGGAGTTATG 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 356 TCGGAGGCACCGCGTGAGATCAAGACCATTTTCGAAAAGTACTCAGAGAATGGAGTTATG 415
Query 121 ACCGTTGATCATCTCCACAGGTTTCTGATCGATGTTCAGAAGCAAGATAAAGCCACCAGA 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 416 ACCGTTGATCATCTCCACAGGTTTCTGATCGATGTTCAGAAACAAGATAAAGCCACCAGA 475
Query 181 GAAGATGCACAGTCAATTATCAATTCTGCATCTTCTCTTCTTCATCGGAATGGTCTCCAA 240
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 476 GAAGATGCACAGTCAATTATCAATTCTGCATCTTCTCTTCTTCATCGTAATGGTCTCCAT 535
Query 241 CTTGATGCTTTCTTCAAGTACCTTTTTGGTGATAATAACCCTCCTCTTGCTCTACATGAG 300
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||
Sbjct 536 CTTGATGCTTTCTTCAAGTACCTCTTTGGTGATAATAACCCTCCTCTTGCTCTCCATAAG 595
Query 301 GTGCATCATGACATGGATGCTCCTATATCGCATTATTTCATATTCACTGGCCATAATTCT 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 596 GTGCATCATGACATGGATGCTCCTATATCGCATTATTTCATATTCACTGGTCATAATTCT 655
Query 361 TATCTCACTGGTAATCAGCTGAGCAGTGACTGTAGTGAGGTACCTATTATAGATGCGTTG 420
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 656 TATCTGACTGGTAATCAGCTGAGCAGTGACTGTAGTGAGGTACCTATTATTGATGCGTTG 715
Query 421 AAGAAAGGTGTTAGAGTGATTGAATTGGATATATGGCCGAATTCCAACAAAGACGATATT 480
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 716 AAGAAAGGTGTTAGAGTCATTGAATTGGATATATGGCCCAATTCCAACAAAGACGATATT 775
Query 481 GATGTTCTTCACGGAATGACTCTCACTACACCGGTGGGGTTGATCAAATGTCTCAAAGCT 540
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 776 GATGTTCTTCACGGAATGACTCTCACTACACCTGTGGGGTTGATCAAATGTCTCAAAGCT 835
Query 541 ATCAGAGCACATGCCTTTGATGTATCCGACTATCCTGTTGTTGTCACTCTTGAAGATCAT 600
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 836 ATCAGAGCACATGCCTTTGATGTATCTGACTATCCTGTTGTTGTAACTCTTGAAGATCAT 895
Query 601 CTTACTCCAGATCTTCAGTCTAAAGTTGCTGAGATGGTTACCGAGATATTTGGGGAAATT 660
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 896 CTTACTCCAGATCTTCAGTCTAAAGTTGCTGAGATGGTTACTGAGATATTTGGGGAAATT 955
Query 661 CTGTTTACTCCTCCTGTGGGAGAATCTTTGAAGGAGTTCCCATCACCAAACTCTTTAAAA 720
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 956 CTGTTTACTCCTCCTGTGGGAGAATCTTTGAAGGAGTTCCCATCGCCAAACTCTTTAAAA 1015
Query 721 AGGCGTATTGTCATCTCAACCAAACCCCCAAAAGAGTACAAGGAAGGAAAAGATGAGGAA 780
|| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1016 AGACGTATTATCATCTCAACCAAACCCCCAAAAGAGTACAAGGAAGGAAAAGATGTGGAA 1075
Query 781 GTGGTGCAGAAAGGTAAAGCCTTGGGTGATGAAGAAGTTTGGGGAAGAGAAGTTCCGAGC 840
||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct 1076 GTGGTGCAGAAAGGTAAAGACTTGGGGGATGAAGAAGTTTGGGGAAGAGAAGTTCCGAGC 1135
Query 841 TTTATTCAAAGGAACAAAAGTGAAGCCAAG 870
|||||||| ||||||||||||||||| |||
Sbjct 1136 TTTATTCAGAGGAACAAAAGTGAAGCTAAG 1165
Score = 1376 bits (745), Expect = 0.0
Identities = 805/835 (96%), Gaps = 0/835 (0%)
Strand=Plus/Plus
Query 861 TGAAGCCAAGTCTAAGAATAATGCACCACCCCAGTATAAACATTTGATTGCAATCCATGC 920
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1207 TGAAGACAAGTCTAAGATTAATGCACCACCCCAGTATAAACATTTGATTGCAATCCATGC 1266
Query 921 TGGGAAACCAAAAGGCGGAATTACTGAGTGTTTAAAGGTAGATCCTGGCAAGGTTAGACG 980
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1267 TGGGAAACCAAAAGGCGGAATTACTGAGTGTTTAAAGGTAGATCCTGACAAGGTTAGACG 1326
Query 981 CCTTAGCTTGAGCGAAGAACAGCTTGAAAAGGCAGCAGAAAAATATGCAAAGCAGATTGT 1040
||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 1327 CCTTAGCTTAAGCGAAGAACAACTTGAAAAGGCAGCAGAAAAATATGCGAAGCAGATTGT 1386
Query 1041 GAGGTTTACTCAGCACAATTTGCTGAGGATTTACCCAAAAGGAACTAGAGTTACTTCATC 1100
|||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct 1387 GAGGTTTACTCAGCACAATTTGCTGAGGATATACCCAAAAGGAACTAGAGTCACATCATC 1446
Query 1101 AAATTACAACCCGTTGGTTGGCTGGAGCCACGGTGCTCAAATGGTGGCTTTCAATATGCA 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1447 AAATTACAACCCGTTGGTTGGCTGGAGCCACGGTGCTCAAATGGTGGCTTTCAATATGCA 1506
Query 1161 GGGGTATGGAAGATCATTATGGCTAATGCAAGGAATGTTTAGAGCCAATGGCGGATGTGG 1220
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 1507 GGGGTATGGAAGATCATTGTGGCTAATGCAGGGAATGTTTAGAGCCAATGGCGGATGTGG 1566
Query 1221 CTACATCAAGAAACCTGATATTCTGCTGAAAAGTGGTTCGGATAGTGACATCTTTGACCC 1280
|||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct 1567 CTACATCAAGAAACCTGACCTTCTGCTGAAAAGTGGTTCGGATAGTGACATATTTGACCC 1626
Query 1281 AAAAGTTACTCTACCTGTAAAAACAACACTTAGGGTAACTATATACATGGGAGAAGGCTG 1340
||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct 1627 AAAAGCTACTCTACCTGTGAAAACAACACTTAGGGTAACTGTATACATGGGAGAAGGCTG 1686
Query 1341 GTACTTTGATTTCCGCCACACCCACTTCGATCAGTATTCACCGCCTGACTTCTATACAAG 1400
||||||||||||||||||||| ||||| || || ||||||||||||||||||||||||||
Sbjct 1687 GTACTTTGATTTCCGCCACACACACTTTGACCAATATTCACCGCCTGACTTCTATACAAG 1746
Query 1401 GGTTGGGATAGCTGGAGTTCCAGGGGATACAATAATGAAGAAGACGAAAACACTGGAGGA 1460
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1747 GGTTGGGATAGCTGGAGTTCCAGGGGATACAGTAATGAAGAAGACGAAAACACTGGAGGA 1806
Query 1461 TAATTGGATACCAGCTTGGGATGAGGTGTTTGAGTTCCCGTTAACTGTTCCAGAGCTGGC 1520
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 1807 TAATTGGATACCAGCTTGGGATGAGGTGTTTGAGTTCCCATTAACCGTTCCAGAGCTGGC 1866
Query 1521 TCTACTGCGATTAGAAGTGCATGAGTATGACATGTCAGAGAAAGATGATTTTGGAGGACA 1580
|| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1867 CCTGCTACGATTAGAAGTGCATGAGTATGACATGTCAGAGAAAGATGATTTTGGAGGACA 1926
Query 1581 GACATGCTTGCCGGTTTGGGAGCTAAGCGAAGGAATAAGAGCATTTCCTTTACATAGCCG 1640
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1927 GACATGCTTACCGGTTTGGGAGCTAAGCGAAGGAATAAGAGCATTTCCTTTACATAGCCG 1986
Query 1641 GAAAGGGGAGAAGTACAAATCCGTGAAGCTTCTCGTGAAGGTGGAGTTTGTGTGA 1695
|||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1987 GAAAGGAGAGAAGTACAAATCCGTTAAGCTTCTCGTGAAGGTGGAGTTTGTGTGA 2041
> AT3G55940.1 | Symbols: | Phosphoinositide-specific phospholipase
C family protein | chr3:20747787-20750184 FORWARD LENGTH=1755
Length=1755
Score = 747 bits (404), Expect = 0.0
Identities = 698/836 (83%), Gaps = 35/836 (4%)
Strand=Plus/Plus
Query 873 TAAGAATAATGCACCACCCCAGTATAAACATTTGATTGCAATCCATGCTGGGAAACCAAA 932
|||||| ||||||||||| | ||||| ||| ||||||||||| | ||||||||||| ||
Sbjct 942 TAAGAAGAATGCACCACCGGAATATAAGCATCTGATTGCAATCGAGGCTGGGAAACCGAA 1001
Query 933 AGGCGGAATTACTGAGTGTTTAAAGGTAGATCCTGGCAAGGTTAGACGCCTTAGCTTGAG 992
||||||||| ||||| ||||| ||||| ||||||| || || ||||| |||||||| ||
Sbjct 1002 AGGCGGAATAACTGAATGTTTGAAGGTGGATCCTGATAAAGTAAGACGGCTTAGCTTAAG 1061
Query 993 CGAAGAACAGCTTGAAAAGGCAGCAGAAAAATATGC-AAAGCAGATTGTGAGGTTTACTC 1051
|||||||| ||||||||||| ||||||||||||| ||| |||||||||||||| ||||
Sbjct 1062 TGAAGAACAACTTGAAAAGGCCTCAGAAAAATATGCTAAA-CAGATTGTGAGGTTCACTC 1120
Query 1052 AGCA-CAATTTGCTGA-GGATTTACCCAAAAGGAACTAGAGTTACTTCATCAAATTACAA 1109
|| | |||||||| | || |||| || |||||||||||| ||||||||||||| || ||
Sbjct 1121 AG-AGGAATTTGCT-ACGGGTTTATCCGAAAGGAACTAGAATTACTTCATCAAACTATAA 1178
Query 1110 CCCGT-TGGTTGGC-TGGAGCCACGGTGCTCAAATGGTGGCTTTCAATATGCAGGGG-TA 1166
||| | | | | || |||||||| || ||||||||||||||||||||||||||||| |
Sbjct 1179 CCC-TCT-GATCGCTTGGAGCCATGGAGCTCAAATGGTGGCTTTCAATATGCAGGGACT- 1235
Query 1167 TGGAAGATCATTATGGCTAATGCAAGGAATGTTTAGAGCCAATGGCGGATGTGGCTACAT 1226
|||| ||||||| ||| ||||||||||||||||||||| |||||| ||||||||||||||
Sbjct 1236 TGGACGATCATTGTGGGTAATGCAAGGAATGTTTAGAGGCAATGGAGGATGTGGCTACAT 1295
Query 1227 CAAGAAACCTGATATTCTGCTGAAAAGTGGTTCGGATAGTGACATCTTTGACCCAAAAGT 1286
|||||||||||| || |||||||| | || | || | | || ||||| |||
Sbjct 1296 TAAGAAACCTGATCTTTTGCTGAAA--TCCAACGC-T-GT-A--T-TT-GACCCGGAAGC 1346
Query 1287 TAC-TCTACCTGTAAAAACAACACTTAGGGTAACTATATACATGGGAGAAGGCTGGTACT 1345
||| | ||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct 1347 TACAT-TACCTGTAAAAACAACACTAAGGGTAACTATATACATGGGAGAAGGATGGTACT 1405
Query 1346 TTGATTTCC-GCCACACCCACTTCGATC-AGTATTCACCGCCTGACTTCTATACAAGGGT 1403
||||||| || | || ||||| |||| | ||||| || ||||| ||||||||||||||
Sbjct 1406 ACGATTTCCCGC-ATACGCACTTTGATCGA-TATTCTCCACCTGATTTCTATACAAGGGT 1463
Query 1404 TGGGATAGCTGGAGTTCCAGGGGATACAATAATGAAGAAGACGAAAACACTGGAGGATAA 1463
||||| ||||||||||| | ||||||| |||||||||||||||||||| | ||||||||
Sbjct 1464 CGGGATTGCTGGAGTTCCCGCGGATACAGTAATGAAGAAGACGAAAACATTAGAGGATAA 1523
Query 1464 TTGGATACCAGCTTGGGATGAGGTGTTTGAGTTCCCGTTAACTGTTCCAGAGCTGGCTCT 1523
|||||||||||||||||| ||||| ||||||||||| ||||| ||||||||||| |||||
Sbjct 1524 TTGGATACCAGCTTGGGACGAGGTTTTTGAGTTCCCATTAACAGTTCCAGAGCTTGCTCT 1583
Query 1524 ACTGCG-ATTAGAAGTGCATGAGTATGACATGTCAGAGAAAGATGATTTTGGAGGACAGA 1582
|| || || || || ||||||||||||||||| |||||||| ||||||||||| || |
Sbjct 1584 TCTACGTATC-GAGGTACATGAGTATGACATGTCTGAGAAAGACGATTTTGGAGGCCAAA 1642
Query 1583 CATGCTTGCCGGTTTGGGAGCTAAG-CGAAGGAATAAGAGCATTTCCTTTACATAGCC-G 1640
|||||||||||||||||||| || | |||||||| | || ||||| | | || || |
Sbjct 1643 TTTGCTTGCCGGTTTGGGAGCTGAGGC-AAGGAATACGTGCCGTTCCTCTCCGTAACCAG 1701
Query 1641 GAAAGGGGAGAAGTACAAATCCGTGAAGCTTCTCGTGAAGGT-GGAGTTTGTGTGA 1695
|| || | |||| | ||||||||||||||| ||| ||| |||||||||||||
Sbjct 1702 GAT-GGTGTCAAGTGTAGATCCGTGAAGCTTCTTGTGC-GGTTGGAGTTTGTGTGA 1755
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 83784709605
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5