BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg904014
Length=1344
Score E
Sequences producing significant alignments: (Bits) Value
AT3G11340.1 | Symbols: | UDP-Glycosyltransferase superfamily p... 2128 0.0
> AT3G11340.1 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr3:3556705-3558269 FORWARD LENGTH=1487
Length=1487
Score = 2128 bits (1152), Expect = 0.0
Identities = 1282/1346 (95%), Gaps = 4/1346 (0%)
Strand=Plus/Plus
Query 1 ATGGAGACTAGAGAAACAAAACCAGTGATCTTTCTCTTCACTTTCCCTTTACAAGGTCAC 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 24 ATGGAGACTAGAGAAACAAAACCAGTGATCTTTCTCTTCCCTTTCCCTTTACAAGGTCAC 83
Query 61 TTAAACCCAATGTTTCAGCTCGCCAACATCTTCTTCAACAGAGGCTTTTCCATCACTGTG 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 84 TTAAACCCAATGTTTCAGCTCGCCAACATCTTCTTCAACAGAGGCTTCTCCATCACTGTG 143
Query 121 ATCCACACTGAGTTCAACTCTCCAAACTCTTCCAATTTCCCTCACTTCACTTTCGTCTCC 180
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 144 ATCCACACTGAGTTCAACTCTCCAAACTCTTCCAATTTCCCTCATTTCACTTTCGTATCC 203
Query 181 ATCCGCGATGGCTTGTCTGAACCCGAATCCTATCCTGATGTCATAGAGATTCTCCATGAC 240
|||| |||| ||||||||||||| ||||||||||| |||||||| |||||||||||||||
Sbjct 204 ATCCCCGATAGCTTGTCTGAACCTGAATCCTATCCCGATGTCATCGAGATTCTCCATGAC 263
Query 241 CTCAATTCCAAGTGTGTTGCTCCTTTTGGTGATTGCTTAAAGAAGCTTATATCCGAAGAA 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 264 CTCAATTCCAAGTGTGTTGCTCCTTTTGGTGATTGCTTAAAGAAGCTTATATCTGAAGAA 323
Query 301 CCAACTGCAGCTTGTGTGATTGTTGACGCTCTTTGGTACTTCACTCACGATTTAACCCAG 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 324 CCAACAGCAGCTTGTGTGATTGTTGACGCTCTTTGGTACTTCACTCACGATTTAACCGAG 383
Query 361 AAATTCGATATCCCGAGGATTGTTCTTCGGACGGTTAACCTCTCATCTTTCGTCGCTTTC 420
|||||| || |||||||||||||||| || || |||||||||||| ||||||||||||||
Sbjct 384 AAATTCAATTTCCCGAGGATTGTTCTCCGAACCGTTAACCTCTCAGCTTTCGTCGCTTTC 443
Query 421 TCAAAGTTTCATGTTTTACGAGAGAAAGGGTATCTTTCTTTACAAGAGACTCAGGCAGAC 480
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 444 TCAAAGTTTCATGTTTTACGAGAGAAAGGGTATCTTTCTTTACAAGAGACTAAGGCAGAC 503
Query 481 TCACCGGTTCCAGAGCTTCCGTATCTTAGAATGAAAGATCTTCCATGGTTCCAGACAGAA 540
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 504 TCACCGGTTCCGGAGCTTCCGTATCTTAGAATGAAGGATCTTCCATGGTTCCAGACAGAA 563
Query 541 GATCCAAGATCAGGGGATAAGTTACAGAGAGGTGTGATGAAGTCACTAAAGTCTTCCTCA 600
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 564 GATCCAAGATCAGGGGATAAGTTACAGATAGGTGTGATGAAGTCACTAAAGTCTTCCTCA 623
Query 601 GGAATTATATTCAACGCCATTGAAGATCTTGAATCTGATCAGCTTGATCAAGCACTCATA 660
||||| ||||||||||||||||||||||||||| | |||||||||||| |||| | ||||
Sbjct 624 GGAATCATATTCAACGCCATTGAAGATCTTGAAACAGATCAGCTTGATGAAGCCCGCATA 683
Query 661 GAATTCCCAGTTCCACTCTTCTGTATTGGACCCTTTCACAGGTACGTTTCAGCTTCATTC 720
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 684 GAATTCCCAGTTCCACTCTTCTGTATTGGACCCTTTCACAGGTACGTTTCAGCTTCATCC 743
Query 721 AGTAGCTTAATTGCACATGACATGACTTGTCTCTCTTGGTTAGACAAGCAAGAAACAAAT 780
||||||||| ||||||| ||||||||||||||||| |||||||||||||||| |||||||
Sbjct 744 AGTAGCTTACTTGCACACGACATGACTTGTCTCTCCTGGTTAGACAAGCAAGCAACAAAT 803
Query 781 TCCGTAATCTACGCAAGTCTTGGAAGCATTGCCTCGATAGACGAATCTGAATTCTTGGAG 840
|||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||
Sbjct 804 TCCGTAATCTACGCAAGTCTTGGAAGCATTGCTTCGATCGATGAATCTGAATTCTTGGAG 863
Query 841 ATCGCTTGGGGTTTAAGAAACAGCAACCAACCTTTTCTATGGGTGGTTAGACCTGGTTTG 900
|| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 864 ATTGCTTGGGGTCTAAGAAACAGCAACCAACCTTTTCTATGGGTGGTTAGACCCGGTTTA 923
Query 901 ATCCACGGGAAAGAATGGATCGAGATTCTGCCTAAAGGGTTCATCGAAAATCTCGAGGGC 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 924 ATCCACGGGAAAGAATGGATCGAGATTCTGCCTAAAGGGTTCATCGAAAATCTCGAGGGC 983
Query 961 CGGGGTAAAATAGTGAAATGGGCACCTCAGCCTGAAGTTTTAGCTCACCGTGCAACAGGC 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 984 CGGGGTAAAATAGTGAAATGGGCACCTCAGCCTGAAGTTTTAGCTCACCGTGCAACAGGC 1043
Query 1021 GGATTCTTAACACATTGTGGATGGAACTCGACGCTTGAGGGCATATGTGAAGCTATACCA 1080
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 1044 GGATTCTTAACACATTGTGGATGGAACTCAACACTTGAGGGCATATGTGAAGCTATACCA 1103
Query 1081 ATGATATGCAAACCATCTTTTGGGGACCAGAGGGTGAATGCTAGGTACATTACCGATGTT 1140
|||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct 1104 ATGATATGCAGACCATCTTTTGGGGACCAGAGGGTGAATGCTAGATACATTAACGATGTT 1163
Query 1141 TGGAAGATCGGATTGCATTTGGAGAACAAGATAGAGAGAACAAA-GATTGAAAGCGCGGT 1199
||||||||||||||||||||||| |||||| |||||||| | | ||| |||| ||||||
Sbjct 1164 TGGAAGATCGGATTGCATTTGGAAAACAAGGTAGAGAGA-CTAGTGATCGAAAACGCGGT 1222
Query 1200 TAGAACACTAATGACGACCTCAGAAGGAGAAGAGATCCGCAA-AGGGATCATGCCAATGA 1258
||||||||||||||||| ||| ||||| |||||||||||||| ||| || ||||| ||||
Sbjct 1223 TAGAACACTAATGACGAGCTCGGAAGGGGAAGAGATCCGCAAGAGG-ATTATGCCCATGA 1281
Query 1259 AGGAAATTGCTGAACAATGCCTAAAGATTGGAGGTTCATCATTTCGGAATCTCGAAAACT 1318
|||||| || |||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 1282 AGGAAACTGTTGAACAATGCCTTAAGCTTGGAGGTTCATCATTTCGGAATCTCGAAAACT 1341
Query 1319 TAATTGCTTATATATTGTCTTTCTAA 1344
||||||||||||||||||||||||||
Sbjct 1342 TAATTGCTTATATATTGTCTTTCTAA 1367
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 66164318310
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5